←Back to structures
rifoxyb1_full_scaffold_4_prodigal-single.1__X__X__00131
Bact-Virrifoxyb1_full_scaffold_4_prodigal-single.1__X__X__00131
Identity
- Kingdom:
- phage
Quality
81.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-71
Domain cluster:
representative
CATH (56)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.87 | 66.0 | 7.00e-01 | 80.0% | 91.4% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.87 | 67.0 | 6.46e-01 | 81.5% | 78.1% |
| 2kwhA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.86 | 64.0 | 6.82e-01 | 78.5% | 91.1% |
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.85 | 60.0 | 5.86e-01 | 73.8% | 67.6% |
| 2rkhA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.84 | 64.0 | 6.03e-01 | 80.0% | 72.4% |
| 1pd3A00 | 1.10.287.230 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.84 | 60.0 | 6.57e-01 | 75.4% | 100.0% |
| 1vx7301 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.84 | 64.0 | 6.08e-01 | 81.5% | 70.3% |
| 4fppB01 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.84 | 63.0 | 6.16e-01 | 80.0% | 83.1% |
| 3na7A00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.84 | 63.0 | 4.20e-01 | 80.0% | 24.1% |
| 1ni3A03 | 1.10.150.300 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Obg-related GTPase Ych/YyaF, coiled-coil domain | 0.83 | 60.0 | 5.34e-01 | 76.9% | 58.2% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.82 | 63.0 | 6.68e-01 | 81.5% | 98.3% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.82 | 59.0 | 4.42e-01 | 75.4% | 76.7% |
| 2gv9A05 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.82 | 61.0 | 6.44e-01 | 78.5% | 88.1% |
| 1hciA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.82 | 62.0 | 4.88e-01 | 80.0% | 68.3% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.81 | 61.0 | 6.09e-01 | 80.0% | 98.5% |
| 1zbtA01 | 6.10.140.1950 | Special › Helix non-globular › Helix Hairpins › | 0.81 | 59.0 | 5.40e-01 | 81.5% | 60.2% |
| 2cazC00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.80 | 58.0 | 5.87e-01 | 76.9% | 81.2% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.78 | 58.0 | 5.51e-01 | 80.0% | 70.5% |
| 3gnlB02 | 1.10.287.1890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.78 | 54.0 | 5.36e-01 | 72.3% | 73.5% |
| 3rlfF01 | 1.20.58.370 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › MalF N-terminal region-like | 0.78 | 56.0 | 5.09e-01 | 75.4% | 57.0% |
| 1rtwB00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.77 | 59.0 | 4.08e-01 | 81.5% | 27.4% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.77 | 57.0 | 5.16e-01 | 80.0% | 58.0% |
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.77 | 60.0 | 5.24e-01 | 84.6% | 73.5% |
| 1chuA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.76 | 58.0 | 5.24e-01 | 84.6% | 60.2% |
| 2qf9A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.76 | 58.0 | 4.34e-01 | 81.5% | 35.9% |
| 2xzmO02 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.76 | 62.0 | 6.12e-01 | 98.5% | 82.9% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 58.0 | 5.86e-01 | 83.1% | 81.8% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.75 | 56.0 | 5.29e-01 | 80.0% | 67.5% |
| 1b04A03 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.74 | 55.0 | 5.59e-01 | 81.5% | 82.3% |
| 2jdiG01 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.73 | 55.0 | 5.63e-01 | 81.5% | 85.2% |
| 2kmfA01 | 1.20.58.810 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27 | 0.72 | 54.0 | 4.72e-01 | 81.5% | 52.9% |
| 3dkqA02 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.72 | 49.0 | 5.47e-01 | 76.9% | 97.9% |
| 3r2qA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.71 | 63.0 | 5.27e-01 | 100.0% | 84.1% |
| 3behB01 | 1.20.120.540 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels | 0.71 | 51.0 | 4.25e-01 | 76.9% | 47.9% |
| 1yq1A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.71 | 63.0 | 5.26e-01 | 100.0% | 89.3% |
| 1kf6A03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.71 | 53.0 | 4.31e-01 | 80.0% | 48.3% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.71 | 58.0 | 4.98e-01 | 92.3% | 93.4% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 52.0 | 4.95e-01 | 80.0% | 69.7% |
| 3i2fA02 | 1.10.3020.10 | Mainly Alpha › Orthogonal Bundle › alpha-amino acid ester hydrolase ( Helical cap domain) › alpha-amino acid ester hydrolase ( Helical cap domain) | 0.70 | 47.0 | 4.20e-01 | 75.4% | 48.4% |
| 2yxhA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.70 | 51.0 | 4.32e-01 | 80.0% | 47.8% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 49.0 | 4.96e-01 | 76.9% | 78.5% |
| 1vt0k00 | 1.10.3230.20 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › P22 tail accessory factor (Gp4) | 0.67 | 45.0 | 3.54e-01 | 70.8% | 45.5% |
| 1wrdA00 | 1.20.58.160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 57.0 | 5.07e-01 | 100.0% | 67.3% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.66 | 50.0 | 5.19e-01 | 84.6% | 91.8% |
| 4finB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 49.0 | 3.23e-01 | 84.6% | 19.1% |
| 2wiyA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.66 | 54.0 | 3.35e-01 | 95.4% | 15.5% |
| 2yqyA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.65 | 48.0 | 3.95e-01 | 81.5% | 69.0% |
| 3besR03 | 6.10.140.1480 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 45.0 | 4.80e-01 | 76.9% | 87.5% |
| 1kf6C00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.63 | 56.0 | 4.44e-01 | 98.5% | 69.2% |
| 3e22A03 | 1.10.287.600 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.63 | 46.0 | 4.92e-01 | 78.5% | 100.0% |
| 4hteA03 | 1.10.167.30 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › | 0.63 | 43.0 | 4.11e-01 | 72.3% | 58.7% |
| 3k9dA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.62 | 45.0 | 3.04e-01 | 78.5% | 20.2% |
| 1k90B03 | 1.20.140.60 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.59 | 52.0 | 4.33e-01 | 100.0% | 69.6% |
| 5aj3N01 | 1.10.287.1480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 48.0 | 4.32e-01 | 93.8% | 76.9% |
| 3vm9A02 | 6.10.140.2110 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 45.0 | 4.83e-01 | 98.5% | 100.0% |
| 2v6eA01 | 1.10.287.3180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 45.0 | 4.35e-01 | 100.0% | 84.0% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3969538 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.88 | 66.0 | 7.13e-01 | 78.5% | 100.0% |
| 2720300 | 192.22.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ral binding domain of RLIP76 › Ral binding domain of RLIP76 › RLIP76_Ral-bd | 0.88 | 66.0 | 7.36e-01 | 80.0% | 100.0% |
| 3330916 | 3846.1.1.0 ↗ | alpha bundles › IcmR › IcmR › IcmR | 0.87 | 66.0 | 7.19e-01 | 80.0% | 98.2% |
| 4944942 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.87 | 66.0 | 6.28e-01 | 80.0% | 73.3% |
| 3313934 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.86 | 68.0 | 5.88e-01 | 83.1% | 63.2% |
| 3600361 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.86 | 67.0 | 5.77e-01 | 81.5% | 68.4% |
| 4031046 | 192.7.1.1 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › FemAB | 0.85 | 66.0 | 6.89e-01 | 81.5% | 90.0% |
| 3720488 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.85 | 64.0 | 5.02e-01 | 80.0% | 41.5% |
| 4257134 | 192.5.1.35 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › Hobbit | 0.85 | 64.0 | 5.47e-01 | 80.0% | 54.0% |
| 4385616 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.85 | 65.0 | 5.22e-01 | 81.5% | 65.8% |
| 4634395 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.84 | 67.0 | 5.56e-01 | 83.1% | 55.2% |
| 3925075 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.84 | 62.0 | 6.06e-01 | 76.9% | 74.3% |
| 4136919 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.84 | 64.0 | 4.54e-01 | 81.5% | 44.3% |
| 3585987 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.83 | 65.0 | 6.13e-01 | 81.5% | 72.0% |
| 3608012 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.83 | 62.0 | 5.63e-01 | 81.5% | 60.0% |
| 3332149 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.83 | 68.0 | 6.34e-01 | 87.7% | 73.8% |
| 3201381 | 192.8.1.139 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Fung_rhodopsin | 0.82 | 61.0 | 5.84e-01 | 78.5% | 68.0% |
| 3888162 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.82 | 61.0 | 4.91e-01 | 80.0% | 42.5% |
| 3968484 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.82 | 63.0 | 6.16e-01 | 81.5% | 84.3% |
| 3229095 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.82 | 63.0 | 5.38e-01 | 81.5% | 54.0% |
| 3942324 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.80 | 63.0 | 6.21e-01 | 100.0% | 78.6% |
| 3896686 | 192.8.1.36 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › M_domain | 0.79 | 59.0 | 5.09e-01 | 80.0% | 57.0% |
| 4942548 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 58.0 | 4.39e-01 | 78.5% | 36.0% |
| 3925160 | 9.26.1.0 ↗ | beta barrels › Lipocalins/Streptavidin | 0.78 | 58.0 | 4.07e-01 | 78.5% | 27.4% |
| 4317199 | 603.5.1.1 ↗ | alpha bundles › STAT-like › FlgN-like › FlgN-like › FlgN | 0.77 | 60.0 | 4.84e-01 | 84.6% | 52.0% |
| 5003516 | 7577.1.1.3 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 | 0.77 | 55.0 | 3.35e-01 | 76.9% | 12.7% |
| 3168396 | 192.15.1.170 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › SWIRM-assoc_1 | 0.77 | 54.0 | 4.39e-01 | 75.4% | 39.2% |
| 3778747 | 3755.3.1.19 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › CCDC144C | 0.76 | 57.0 | 3.55e-01 | 81.5% | 14.6% |
| 3742115 | 9.26.1.0 ↗ | beta barrels › Lipocalins/Streptavidin | 0.76 | 57.0 | 4.02e-01 | 80.0% | 27.9% |
| 3925622 | 603.1.1.97 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE | 0.76 | 69.0 | 4.60e-01 | 100.0% | 80.0% |
| 3180975 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.75 | 57.0 | 4.06e-01 | 81.5% | 28.4% |
| 3385886 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.75 | 61.0 | 4.92e-01 | 100.0% | 47.5% |
| 3613914 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.75 | 57.0 | 5.44e-01 | 81.5% | 72.0% |
| 3496091 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.75 | 68.0 | 5.29e-01 | 100.0% | 63.0% |
| 4995268 | 601.3.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt | 0.74 | 64.0 | 4.99e-01 | 92.3% | 80.0% |
| 5030987 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.74 | 69.0 | 6.41e-01 | 100.0% | 86.3% |
| 4527465 | 101.1.4.83 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Med10 | 0.74 | 60.0 | 4.95e-01 | 90.8% | 55.8% |
| 4608920 | 192.8.1.475 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › RLIP76_Ral-bd | 0.73 | 65.0 | 5.88e-01 | 95.4% | 81.2% |
| 5077926 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.73 | 55.0 | 4.36e-01 | 81.5% | 45.2% |
| 4641836 | 3939.1.1.145 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › GrpE | 0.73 | 53.0 | 4.72e-01 | 100.0% | 53.7% |
| 3916884 | 192.29.1.1 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB_dom | 0.72 | 53.0 | 5.34e-01 | 80.0% | 83.1% |
| 4013992 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.72 | 67.0 | 4.89e-01 | 100.0% | 45.6% |
| 4028334 | 2004.1.1.505 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_30 | 0.70 | 63.0 | 3.99e-01 | 98.5% | 24.8% |
| 4000502 | 192.8.1.305 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › VPS18_RING_C | 0.70 | 52.0 | 4.48e-01 | 83.1% | 50.0% |
| 3607086 | 4992.1.1.0 ↗ | extended segments › RelB-like › RelB-like › RelB-like | 0.70 | 64.0 | 5.93e-01 | 100.0% | 100.0% |
| 5032064 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.67 | 52.0 | 4.96e-01 | 100.0% | 72.2% |
| 4884642 | 2004.1.1.430 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, ABC_tran_Xtn | 0.66 | 58.0 | 3.72e-01 | 95.4% | 65.9% |
| 3971635 | 2004.1.1.430 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, ABC_tran_Xtn | 0.65 | 59.0 | 3.44e-01 | 100.0% | 44.7% |
| 3168021 | 604.12.1.2 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Vta1 | 0.65 | 57.0 | 5.28e-01 | 98.5% | 77.5% |
| 4034201 | 192.7.1.1 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › FemAB | 0.63 | 46.0 | 4.78e-01 | 83.1% | 96.7% |
| 3613353 | 3345.1.1.0 ↗ | alpha arrays › MRG domain › MRG domain › MRG domain | 0.63 | 54.0 | 3.88e-01 | 100.0% | 51.7% |
| 3580104 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.62 | 52.0 | 4.71e-01 | 98.5% | 78.9% |
| 3242821 | 192.10.1.0 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain | 0.59 | 42.0 | 4.30e-01 | 100.0% | 83.3% |
| 3230196 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 46.0 | 3.87e-01 | 100.0% | 54.2% |
| 3189774 | 109.4.1.119 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TRF | 0.54 | 45.0 | 3.18e-01 | 100.0% | 28.3% |