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rifoxyb1_full_scaffold_4_prodigal-single.1__X__X__00163
Bact-Virrifoxyb1_full_scaffold_4_prodigal-single.1__X__X__00163
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-211
Domain cluster:
rep: putative_eIF-2gamma__YP_003970112__Cafeteria_roenbergensis_virus_BV-PW1__693272__D19-198
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00009.34 best | GTP_EFTU | 140.5 | 6.70e-41 | 97.6% | 94.2% |
D2
high
residues 218-297
Domain cluster:
rep: putative_translation_elongation_factor_EF-1_alpha__YP_009052194__Aureococcus_anophagefferens_virus__1474867__D257-340
CATH (73)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zunB02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.99 | 96.0 | 9.16e-01 | 100.0% | 88.9% |
| 8b6zA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.92 | 88.0 | 8.71e-01 | 100.0% | 100.0% |
| 2hcjB02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.91 | 87.0 | 8.17e-01 | 100.0% | 89.4% |
| 3p26B02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.91 | 87.0 | 7.88e-01 | 100.0% | 87.1% |
| 2yweA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.91 | 86.0 | 7.89e-01 | 100.0% | 85.0% |
| 1r5bA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.91 | 86.0 | 8.27e-01 | 100.0% | 89.9% |
| 4zciA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.89 | 85.0 | 7.71e-01 | 100.0% | 84.2% |
| 1wb1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.89 | 83.0 | 7.92e-01 | 100.0% | 89.1% |
| 1vx4404 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.89 | 84.0 | 6.77e-01 | 100.0% | 66.4% |
| 1g7sA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.88 | 83.0 | 7.36e-01 | 100.0% | 83.3% |
| 2bm0A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.88 | 83.0 | 7.52e-01 | 100.0% | 79.6% |
| 3e1yE01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.88 | 83.0 | 8.09e-01 | 100.0% | 93.0% |
| 3mcaA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.88 | 83.0 | 7.09e-01 | 100.0% | 69.5% |
| 1kk1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.87 | 82.0 | 7.22e-01 | 100.0% | 91.0% |
| 5h7jA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.87 | 78.0 | 6.96e-01 | 98.8% | 70.4% |
| 2crvA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.87 | 80.0 | 7.58e-01 | 100.0% | 93.5% |
| 1xe1A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.86 | 80.0 | 7.61e-01 | 100.0% | 86.8% |
| 4b43A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.86 | 78.0 | 6.84e-01 | 100.0% | 67.8% |
| 4he6A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.84 | 78.0 | 7.50e-01 | 100.0% | 88.8% |
| 3wndA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.84 | 67.0 | 6.31e-01 | 83.7% | 79.8% |
| 1d1nA00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.84 | 77.0 | 7.13e-01 | 100.0% | 84.8% |
| 7syvx01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.83 | 76.0 | 6.29e-01 | 100.0% | 67.9% |
| 3wbiA04 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.83 | 77.0 | 6.20e-01 | 100.0% | 68.3% |
| 1g7sA04 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.83 | 76.0 | 7.37e-01 | 100.0% | 94.4% |
| 1f60A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.82 | 65.0 | 5.86e-01 | 85.0% | 84.3% |
| 1zunB03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.81 | 64.0 | 5.75e-01 | 83.7% | 82.1% |
| 3mcaA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.80 | 63.0 | 5.79e-01 | 83.7% | 80.4% |
| 2h5eA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.80 | 74.0 | 5.71e-01 | 100.0% | 48.8% |
| 2dy1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.78 | 71.0 | 6.63e-01 | 100.0% | 82.5% |
| 1b23P03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.70 | 55.0 | 5.23e-01 | 83.7% | 81.9% |
| 6f2mA02 | 2.40.30.290 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.69 | 59.0 | 5.74e-01 | 100.0% | 85.1% |
| 1vwxB02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.69 | 63.0 | 4.79e-01 | 100.0% | 73.9% |
| 2eqnA01 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.69 | 61.0 | 5.94e-01 | 100.0% | 89.7% |
| 4ac9C04 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.68 | 54.0 | 5.49e-01 | 100.0% | 87.5% |
| 6mv2A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.67 | 58.0 | 5.38e-01 | 100.0% | 96.2% |
| 5ylyA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.66 | 58.0 | 5.23e-01 | 100.0% | 87.5% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.66 | 58.0 | 5.35e-01 | 100.0% | 94.3% |
| 5ycqA00 | 2.30.30.390 | Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain | 0.65 | 43.0 | 4.41e-01 | 75.0% | 70.1% |
| 5tr9A01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.65 | 57.0 | 5.45e-01 | 100.0% | 91.7% |
| 2xnjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.65 | 58.0 | 5.31e-01 | 100.0% | 90.4% |
| 3kewA01 | 2.40.30.130 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.64 | 51.0 | 5.05e-01 | 100.0% | 82.1% |
| 1tvcA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.64 | 57.0 | 5.15e-01 | 100.0% | 85.3% |
| 1qfjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.64 | 56.0 | 5.44e-01 | 100.0% | 90.1% |
| 2eixA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.64 | 56.0 | 5.14e-01 | 100.0% | 85.8% |
| 2gpjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 57.0 | 5.32e-01 | 100.0% | 90.0% |
| 5gxuB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 55.0 | 4.83e-01 | 100.0% | 85.2% |
| 4lusB01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.62 | 55.0 | 4.52e-01 | 100.0% | 57.7% |
| 1ddgA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 55.0 | 4.91e-01 | 100.0% | 92.1% |
| 1txqA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.61 | 42.0 | 4.37e-01 | 71.2% | 97.3% |
| 4v15A01 | 2.40.37.20 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › D-serine dehydratase-like domain | 0.58 | 47.0 | 3.93e-01 | 90.0% | 75.0% |
| 2oq5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 49.0 | 4.49e-01 | 92.5% | 76.0% |
| 6r2wH02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 48.0 | 4.38e-01 | 92.5% | 75.5% |
| 5dj7A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 48.0 | 4.37e-01 | 92.5% | 70.4% |
| 2f91A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 48.0 | 4.32e-01 | 92.5% | 75.2% |
| 3dfjA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 48.0 | 4.29e-01 | 92.5% | 73.5% |
| 5f8zA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 47.0 | 4.28e-01 | 92.5% | 75.0% |
| 3q5zA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 40.0 | 3.52e-01 | 75.0% | 73.6% |
| 5fcrC02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 47.0 | 4.30e-01 | 92.5% | 78.5% |
| 1ltoA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 46.0 | 4.24e-01 | 92.5% | 75.2% |
| 3jxoA00 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.55 | 46.0 | 4.58e-01 | 95.0% | 94.0% |
| 4h4fA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 46.0 | 4.16e-01 | 92.5% | 73.6% |
| 4ku0D00 | 2.60.200.60 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.55 | 38.0 | 3.60e-01 | 72.5% | 90.6% |
| 7a4aA01 | 2.60.40.3770 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 42.0 | 4.19e-01 | 100.0% | 84.3% |
| 4oifA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 39.0 | 4.25e-01 | 86.3% | 100.0% |
| 3q48A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.80e-01 | 100.0% | 74.7% |
| 3ebrA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 43.0 | 3.58e-01 | 95.0% | 74.4% |
| 1ogpA02 | 2.60.40.650 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 44.0 | 3.89e-01 | 100.0% | 71.7% |
| 1yq2A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 45.0 | 4.04e-01 | 100.0% | 74.8% |
| 2k78A00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 41.0 | 3.60e-01 | 100.0% | 56.3% |
| 4mypA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 40.0 | 3.55e-01 | 100.0% | 57.9% |
| 4kh9A03 | 2.60.120.1370 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 41.0 | 3.70e-01 | 90.0% | 93.8% |
| 6wy9B02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.50 | 39.0 | 3.81e-01 | 90.0% | 94.7% |
| 2ic2A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 43.0 | 4.05e-01 | 100.0% | 83.7% |
ECOD (99)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3289382 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 1.00 | 97.0 | 8.63e-01 | 100.0% | 80.0% |
| 4514773 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.99 | 97.0 | 8.77e-01 | 100.0% | 80.0% |
| 143 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.99 | 96.0 | 9.07e-01 | 100.0% | 87.0% |
| 3963772 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.99 | 96.0 | 9.10e-01 | 100.0% | 93.3% |
| 5058285 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.97 | 93.0 | 8.83e-01 | 100.0% | 87.8% |
| 4984273 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.96 | 90.0 | 8.82e-01 | 100.0% | 91.8% |
| 4108526 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.93 | 89.0 | 8.30e-01 | 100.0% | 89.5% |
| 4943568 | 1.1.7.147 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP-eEF1A_C | 0.93 | 88.0 | 8.24e-01 | 100.0% | 86.3% |
| 4084726 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.92 | 88.0 | 7.87e-01 | 100.0% | 81.0% |
| 4658483 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.92 | 88.0 | 7.93e-01 | 100.0% | 80.6% |
| 3483799 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.92 | 88.0 | 7.60e-01 | 100.0% | 71.3% |
| 3594492 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.92 | 88.0 | 7.86e-01 | 100.0% | 78.1% |
| 3502344 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.92 | 88.0 | 8.18e-01 | 100.0% | 88.4% |
| 3683416 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.92 | 88.0 | 7.37e-01 | 100.0% | 66.4% |
| 3700677 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.92 | 88.0 | 7.85e-01 | 100.0% | 77.1% |
| 4525954 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.92 | 87.0 | 7.98e-01 | 100.0% | 85.0% |
| 3426918 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.92 | 88.0 | 7.56e-01 | 100.0% | 72.2% |
| 4338732 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.92 | 87.0 | 8.13e-01 | 100.0% | 87.4% |
| 4944211 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.92 | 87.0 | 7.96e-01 | 100.0% | 82.0% |
| 4526968 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.91 | 87.0 | 7.79e-01 | 100.0% | 81.0% |
| 4949488 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.91 | 87.0 | 7.94e-01 | 100.0% | 82.0% |
| 4948817 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.91 | 87.0 | 5.38e-01 | 100.0% | 21.9% |
| 3947061 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.91 | 87.0 | 7.63e-01 | 100.0% | 77.3% |
| 4653293 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.91 | 87.0 | 7.63e-01 | 100.0% | 79.1% |
| 5005126 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.91 | 87.0 | 8.28e-01 | 100.0% | 91.1% |
| 1421337 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.91 | 86.0 | 8.03e-01 | 100.0% | 85.4% |
| 4243239 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.91 | 86.0 | 7.14e-01 | 100.0% | 66.9% |
| 5058339 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.91 | 86.0 | 8.05e-01 | 100.0% | 86.3% |
| 3749808 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.91 | 87.0 | 7.75e-01 | 100.0% | 76.2% |
| 3620431 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.91 | 86.0 | 7.57e-01 | 100.0% | 77.3% |
| 5001727 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.91 | 78.0 | 7.90e-01 | 100.0% | 91.3% |
| 3194678 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.91 | 86.0 | 7.73e-01 | 100.0% | 78.1% |
| 4108266 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.91 | 86.0 | 7.50e-01 | 100.0% | 72.6% |
| 3294376 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.91 | 86.0 | 8.26e-01 | 100.0% | 88.9% |
| 3392294 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.91 | 86.0 | 7.87e-01 | 100.0% | 85.0% |
| 3579597 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.91 | 86.0 | 7.55e-01 | 100.0% | 77.3% |
| 3615156 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.91 | 86.0 | 7.43e-01 | 100.0% | 70.4% |
| 3734536 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.91 | 86.0 | 7.70e-01 | 100.0% | 79.0% |
| 4676852 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.91 | 86.0 | 8.22e-01 | 100.0% | 91.1% |
| 3385442 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.91 | 86.0 | 8.20e-01 | 100.0% | 90.0% |
| 4381865 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.91 | 86.0 | 7.55e-01 | 100.0% | 77.3% |
| 4146985 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.91 | 86.0 | 7.55e-01 | 100.0% | 77.3% |
| 4366946 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.91 | 86.0 | 7.68e-01 | 100.0% | 81.0% |
| 4518161 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.90 | 85.0 | 7.66e-01 | 100.0% | 81.0% |
| 4158768 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.90 | 85.0 | 7.66e-01 | 100.0% | 81.0% |
| 4037780 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.90 | 86.0 | 6.65e-01 | 100.0% | 53.5% |
| 3786548 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.90 | 85.0 | 7.98e-01 | 100.0% | 90.5% |
| 4029670 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.90 | 86.0 | 7.17e-01 | 100.0% | 65.6% |
| None | — | 0.90 | 85.0 | 7.78e-01 | 100.0% | 85.0% | |
| 4982772 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.90 | 85.0 | 6.93e-01 | 100.0% | 60.7% |
| 4070992 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.90 | 85.0 | 7.47e-01 | 100.0% | 77.3% |
| 4600912 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.90 | 85.0 | 7.02e-01 | 100.0% | 63.1% |
| 4028218 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.89 | 84.0 | 6.99e-01 | 100.0% | 65.4% |
| 5047262 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.89 | 85.0 | 7.11e-01 | 100.0% | 65.6% |
| 3737206 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.89 | 85.0 | 7.58e-01 | 100.0% | 78.1% |
| 4391336 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.89 | 84.0 | 7.43e-01 | 100.0% | 74.5% |
| 4118889 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.89 | 84.0 | 6.95e-01 | 100.0% | 63.1% |
| 3501569 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.89 | 84.0 | 7.06e-01 | 100.0% | 65.6% |
| 4943444 | 1.1.7.145 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EFG_III | 0.89 | 84.0 | 6.94e-01 | 100.0% | 63.1% |
| 3968632 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.89 | 84.0 | 8.00e-01 | 100.0% | 93.3% |
| 4278212 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.88 | 84.0 | 6.92e-01 | 100.0% | 63.1% |
| 3556029 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.88 | 83.0 | 6.91e-01 | 100.0% | 63.1% |
| 3494601 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.88 | 83.0 | 7.64e-01 | 100.0% | 81.0% |
| 3744838 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.88 | 84.0 | 7.51e-01 | 100.0% | 78.1% |
| 1166956 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.88 | 83.0 | 7.69e-01 | 100.0% | 83.7% |
| 3710309 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.88 | 83.0 | 7.35e-01 | 100.0% | 73.6% |
| 3648086 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.88 | 83.0 | 6.91e-01 | 100.0% | 63.1% |
| 5058835 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.88 | 84.0 | 7.01e-01 | 100.0% | 65.6% |
| 4012780 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.88 | 83.0 | 6.79e-01 | 100.0% | 60.7% |
| 3628576 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.88 | 83.0 | 7.94e-01 | 100.0% | 90.0% |
| 4056457 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.88 | 83.0 | 6.98e-01 | 100.0% | 65.6% |
| 3979323 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.88 | 83.0 | 7.75e-01 | 100.0% | 87.4% |
| 4985560 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.88 | 80.0 | 7.81e-01 | 100.0% | 90.6% |
| 1688247 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.88 | 83.0 | 7.87e-01 | 100.0% | 90.1% |
| 3593939 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.88 | 83.0 | 7.75e-01 | 100.0% | 85.3% |
| 3628582 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.88 | 83.0 | 7.19e-01 | 100.0% | 74.8% |
| 4942595 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.87 | 79.0 | 7.96e-01 | 100.0% | 96.2% |
| 4003349 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.87 | 82.0 | 7.84e-01 | 100.0% | 91.1% |
| 5033373 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.87 | 79.0 | 7.53e-01 | 100.0% | 85.6% |
| 5070918 | 1.1.7.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 | 0.87 | 81.0 | 6.97e-01 | 100.0% | 70.0% |
| 3744748 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.87 | 81.0 | 7.62e-01 | 100.0% | 84.2% |
| 4989942 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.86 | 81.0 | 7.76e-01 | 100.0% | 90.0% |
| 140 | 1.1.7.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 | 0.86 | 80.0 | 7.61e-01 | 100.0% | 86.8% |
| 4027927 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.86 | 81.0 | 7.58e-01 | 100.0% | 88.4% |
| 3229260 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.86 | 80.0 | 7.69e-01 | 100.0% | 91.1% |
| 3221126 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.86 | 81.0 | 6.90e-01 | 100.0% | 68.3% |
| 5056666 | 1.1.7.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 | 0.85 | 79.0 | 6.63e-01 | 100.0% | 65.6% |
| 4945654 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.85 | 79.0 | 6.58e-01 | 100.0% | 64.6% |
| 4929067 | 1.1.7.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 | 0.85 | 79.0 | 6.57e-01 | 100.0% | 64.6% |
| 4955926 | 1.1.7.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 | 0.85 | 79.0 | 6.48e-01 | 100.0% | 62.2% |
| 5035413 | 1.1.7.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 | 0.85 | 79.0 | 6.56e-01 | 100.0% | 64.6% |
| 4365593 | 1.1.7.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 | 0.85 | 79.0 | 6.40e-01 | 100.0% | 60.7% |
| 4977309 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.84 | 79.0 | 6.56e-01 | 100.0% | 64.6% |
| 4322398 | 1.1.7.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 | 0.84 | 79.0 | 6.56e-01 | 100.0% | 65.4% |
| 4271152 | 1.1.7.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 | 0.84 | 78.0 | 6.45e-01 | 100.0% | 62.2% |
| 5041525 | 1.1.7.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 | 0.84 | 77.0 | 6.35e-01 | 100.0% | 60.9% |
| 4512235 | 1.1.7.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 | 0.83 | 77.0 | 6.38e-01 | 100.0% | 62.2% |
| 4173791 | 1.1.7.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 | 0.83 | 77.0 | 6.46e-01 | 100.0% | 65.1% |
| 4937150 | 1.1.7.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 | 0.83 | 76.0 | 6.31e-01 | 100.0% | 62.2% |
D3
high
residues 303-405
Domain cluster:
rep: translation_elongation_factor_1-alpha__YP_009345567__Noumeavirus__1955558__D312-409
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF22594.3 best | GTP-eEF1A_C | 100.1 | 1.10e-28 | 96.1% | 99.0% |
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zunB03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.99 | 96.0 | 9.55e-01 | 100.0% | 97.2% |
| 3mcaA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.91 | 81.0 | 8.23e-01 | 100.0% | 94.1% |
| 1f60A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.89 | 85.0 | 8.37e-01 | 100.0% | 96.3% |
| 3p26A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.89 | 84.0 | 8.22e-01 | 99.0% | 95.5% |
| 3wndA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.88 | 75.0 | 7.90e-01 | 100.0% | 97.9% |
| 1r5bA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.88 | 83.0 | 8.14e-01 | 100.0% | 93.6% |
| 1b23P03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.86 | 72.0 | 7.59e-01 | 100.0% | 95.7% |
| 1kjzA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.79 | 66.0 | 6.98e-01 | 100.0% | 96.7% |
| 4zgnB00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.77 | 66.0 | 6.68e-01 | 100.0% | 90.3% |
| 4zciA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.75 | 56.0 | 5.67e-01 | 93.2% | 79.2% |
| 1xe1A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.74 | 51.0 | 5.37e-01 | 90.3% | 80.2% |
| 1wb1A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.73 | 69.0 | 6.58e-01 | 100.0% | 88.0% |
| 2hcjB02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.73 | 53.0 | 5.59e-01 | 90.3% | 83.0% |
| 4paaA05 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.71 | 50.0 | 5.52e-01 | 100.0% | 94.9% |
| 2rdeA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.68 | 43.0 | 4.21e-01 | 83.5% | 58.6% |
| 1boqA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.67 | 45.0 | 4.51e-01 | 88.3% | 66.4% |
| 1hpgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.67 | 44.0 | 4.55e-01 | 88.3% | 70.7% |
| 3tfiA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.66 | 48.0 | 3.29e-01 | 100.0% | 21.1% |
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.66 | 48.0 | 5.02e-01 | 89.3% | 83.9% |
| 1g7sA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.66 | 53.0 | 5.26e-01 | 91.3% | 82.4% |
| 2dy1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.65 | 47.0 | 4.84e-01 | 93.2% | 79.4% |
| 3jxoA00 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.59 | 42.0 | 4.63e-01 | 96.1% | 91.7% |
| 3nrlA00 | 2.40.10.390 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.55 | 34.0 | 4.09e-01 | 78.6% | 94.1% |
| 4g65B02 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.54 | 40.0 | 4.26e-01 | 98.1% | 89.1% |
| 4g65A04 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.53 | 42.0 | 4.39e-01 | 94.2% | 95.6% |
| 3x1lB03 | 2.60.40.4350 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 45.0 | 4.55e-01 | 100.0% | 93.3% |
| 1ok8A01 | 2.60.98.10 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 | 0.52 | 36.0 | 3.53e-01 | 72.8% | 93.9% |
| 4ep8B00 | 2.10.150.10 | Mainly Beta › Ribbon › Urease, subunit B › Urease, beta subunit | 0.51 | 37.0 | 3.79e-01 | 90.3% | 77.2% |
| 4fkeA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.51 | 40.0 | 3.19e-01 | 85.4% | 85.9% |
| 1ykwA01 | 3.30.70.150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain | 0.51 | 45.0 | 4.18e-01 | 98.1% | 77.1% |
| 1gskA03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.50 | 43.0 | 3.83e-01 | 96.1% | 89.6% |
ECOD (95)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4650771 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.99 | 97.0 | 9.26e-01 | 100.0% | 89.6% |
| 4270358 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.99 | 97.0 | 8.75e-01 | 100.0% | 86.2% |
| 3963774 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.99 | 97.0 | 9.63e-01 | 100.0% | 99.0% |
| 4614440 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.99 | 97.0 | 9.22e-01 | 100.0% | 89.6% |
| 3960359 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.99 | 96.0 | 9.02e-01 | 100.0% | 87.5% |
| 4144937 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.98 | 96.0 | 8.99e-01 | 100.0% | 85.8% |
| 4292740 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.98 | 96.0 | 8.27e-01 | 100.0% | 71.0% |
| 4097598 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.98 | 95.0 | 9.30e-01 | 100.0% | 93.6% |
| 4043818 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.98 | 95.0 | 8.88e-01 | 100.0% | 85.8% |
| 4099267 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.97 | 92.0 | 8.20e-01 | 99.0% | 74.8% |
| 3663830 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.92 | 89.0 | 8.49e-01 | 100.0% | 94.8% |
| 5029792 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.92 | 88.0 | 8.75e-01 | 100.0% | 97.1% |
| 5046884 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.92 | 73.0 | 7.84e-01 | 99.0% | 94.4% |
| 3729551 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.92 | 88.0 | 8.43e-01 | 100.0% | 93.0% |
| 3598857 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.92 | 88.0 | 8.28e-01 | 100.0% | 86.7% |
| 4930314 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.92 | 69.0 | 7.64e-01 | 96.1% | 94.1% |
| 3599223 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.92 | 87.0 | 8.48e-01 | 99.0% | 94.5% |
| 4514948 | 1.1.8.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Beta-barrel_SelB | 0.91 | 74.0 | 7.71e-01 | 100.0% | 90.5% |
| 3206575 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.91 | 71.0 | 6.91e-01 | 98.1% | 74.5% |
| 3608683 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.91 | 88.0 | 7.97e-01 | 100.0% | 80.0% |
| 4059866 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.91 | 83.0 | 7.99e-01 | 97.1% | 85.2% |
| 3270372 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.91 | 87.0 | 8.30e-01 | 99.0% | 88.7% |
| 4990285 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.91 | 71.0 | 7.67e-01 | 100.0% | 93.3% |
| 140913 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.91 | 81.0 | 8.30e-01 | 100.0% | 96.0% |
| 3699413 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.91 | 87.0 | 8.53e-01 | 100.0% | 95.4% |
| 3578245 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.91 | 87.0 | 8.19e-01 | 100.0% | 86.7% |
| 3180074 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.91 | 80.0 | 8.34e-01 | 100.0% | 98.9% |
| 4016300 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.91 | 80.0 | 8.34e-01 | 100.0% | 98.9% |
| 3665168 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.91 | 87.0 | 8.20e-01 | 100.0% | 94.2% |
| 3786547 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.91 | 85.0 | 8.46e-01 | 100.0% | 95.2% |
| 3476488 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.91 | 86.0 | 8.41e-01 | 99.0% | 94.5% |
| 3270538 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.91 | 87.0 | 8.04e-01 | 100.0% | 85.6% |
| 3502343 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.91 | 81.0 | 8.26e-01 | 99.0% | 96.0% |
| 4943569 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.90 | 85.0 | 8.44e-01 | 100.0% | 96.2% |
| 2756432 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.90 | 86.0 | 7.60e-01 | 100.0% | 76.4% |
| 3968633 | 1.1.8.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Beta-barrel_SelB | 0.90 | 74.0 | 7.88e-01 | 100.0% | 96.7% |
| 4932663 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.90 | 86.0 | 8.39e-01 | 100.0% | 94.5% |
| 3726432 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.90 | 78.0 | 8.17e-01 | 99.0% | 97.9% |
| 3597995 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.90 | 71.0 | 6.96e-01 | 100.0% | 76.4% |
| 4288082 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.90 | 73.0 | 7.83e-01 | 84.5% | 100.0% |
| 3566270 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.90 | 72.0 | 7.68e-01 | 100.0% | 94.4% |
| 3725596 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.90 | 70.0 | 6.48e-01 | 99.0% | 66.4% |
| 5075927 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.90 | 70.0 | 7.58e-01 | 98.1% | 94.3% |
| 4948817 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.89 | 85.0 | 5.56e-01 | 100.0% | 27.7% |
| 3407712 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.89 | 71.0 | 7.34e-01 | 100.0% | 86.7% |
| 5022645 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.89 | 74.0 | 7.91e-01 | 98.1% | 97.8% |
| 3990253 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.89 | 84.0 | 7.68e-01 | 99.0% | 79.8% |
| 4983877 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.89 | 70.0 | 7.53e-01 | 100.0% | 93.3% |
| 1138674 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.89 | 84.0 | 8.22e-01 | 99.0% | 95.5% |
| 3594503 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.89 | 84.0 | 7.81e-01 | 100.0% | 83.2% |
| 5020442 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.89 | 76.0 | 7.93e-01 | 100.0% | 96.8% |
| 5077659 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.89 | 85.0 | 8.29e-01 | 100.0% | 95.5% |
| 3219717 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.88 | 70.0 | 7.49e-01 | 99.0% | 94.4% |
| 3585142 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.88 | 74.0 | 6.91e-01 | 100.0% | 74.2% |
| 4961202 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.87 | 71.0 | 7.65e-01 | 99.0% | 97.8% |
| 3393006 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.87 | 72.0 | 6.93e-01 | 100.0% | 77.4% |
| 3928362 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.86 | 71.0 | 7.31e-01 | 100.0% | 89.8% |
| 4129006 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.86 | 72.0 | 7.57e-01 | 100.0% | 94.7% |
| 3618810 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.86 | 72.0 | 6.80e-01 | 100.0% | 75.4% |
| 5060627 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.86 | 79.0 | 7.84e-01 | 97.1% | 97.1% |
| 3966451 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.86 | 72.0 | 7.52e-01 | 100.0% | 94.7% |
| 4230323 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.85 | 76.0 | 7.78e-01 | 99.0% | 96.0% |
| 5055336 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.85 | 69.0 | 7.41e-01 | 100.0% | 96.7% |
| 4071075 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.85 | 72.0 | 7.23e-01 | 100.0% | 86.7% |
| 1563513 | 1.1.8.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Ski7_3rd | 0.85 | 75.0 | 7.40e-01 | 100.0% | 88.8% |
| 4944212 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.84 | 67.0 | 7.22e-01 | 98.1% | 96.6% |
| 5063794 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.83 | 61.0 | 6.92e-01 | 100.0% | 98.8% |
| 5073222 | 1.1.8.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › aSelB_III | 0.82 | 73.0 | 7.47e-01 | 98.1% | 96.0% |
| 3741512 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.81 | 75.0 | 7.48e-01 | 98.1% | 95.2% |
| 5080510 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.81 | 71.0 | 7.44e-01 | 100.0% | 98.9% |
| 5074592 | 1.1.8.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › aSelB_III | 0.81 | 74.0 | 7.24e-01 | 100.0% | 90.0% |
| 4999165 | 1.1.8.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › aSelB_III | 0.79 | 72.0 | 7.07e-01 | 100.0% | 90.0% |
| 4890601 | 1.1.7.93 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D3, GTP_EFTU_D2 | 0.79 | 55.0 | 5.63e-01 | 88.3% | 74.7% |
| 1851169 | 1.1.8.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › aSelB_III | 0.77 | 73.0 | 7.00e-01 | 100.0% | 88.8% |
| 3389762 | 1.1.8.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › euk_SelB_III | 0.76 | 71.0 | 6.42e-01 | 100.0% | 85.2% |
| 3229259 | 1.1.8.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › euk_SelB_III | 0.76 | 70.0 | 6.60e-01 | 100.0% | 84.2% |
| 3795417 | 1.1.8.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › euk_SelB_III | 0.76 | 71.0 | 6.78e-01 | 100.0% | 88.7% |
| 4030465 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.75 | 70.0 | 6.24e-01 | 100.0% | 79.3% |
| 4000317 | 1.1.8.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › euk_SelB_III | 0.75 | 68.0 | 6.68e-01 | 100.0% | 90.9% |
| 3187986 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.74 | 62.0 | 6.23e-01 | 100.0% | 87.6% |
| 4029902 | 1.1.8.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › RIBIOP_C | 0.74 | 67.0 | 6.14e-01 | 100.0% | 76.9% |
| 3642890 | 1.1.8.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › RIBIOP_C | 0.73 | 66.0 | 5.29e-01 | 100.0% | 52.1% |
| 3640471 | 1.1.8.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › RIBIOP_C | 0.73 | 64.0 | 5.79e-01 | 100.0% | 71.1% |
| 3595113 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.73 | 67.0 | 6.02e-01 | 100.0% | 74.1% |
| 3496776 | 1.1.8.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › RIBIOP_C | 0.72 | 68.0 | 5.74e-01 | 100.0% | 68.1% |
| 3742317 | 1.1.8.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › RIBIOP_C | 0.71 | 64.0 | 5.61e-01 | 100.0% | 67.3% |
| 4019258 | 1.1.8.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › RIBIOP_C | 0.70 | 65.0 | 5.01e-01 | 100.0% | 50.5% |
| 4024652 | 1.1.8.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › RIBIOP_C | 0.69 | 64.0 | 5.26e-01 | 100.0% | 59.0% |
| 4315769 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 56.0 | 5.55e-01 | 94.2% | 84.5% |
| 4072484 | 1.1.8.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel | 0.66 | 47.0 | 4.96e-01 | 98.1% | 85.6% |
| 5049303 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 56.0 | 5.11e-01 | 92.2% | 74.1% |
| 5026641 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 55.0 | 5.25e-01 | 92.2% | 82.5% |
| 4932728 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 55.0 | 5.32e-01 | 92.2% | 83.5% |
| 4257969 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 49.0 | 4.56e-01 | 94.2% | 71.3% |
| 3923531 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.54 | 42.0 | 3.34e-01 | 84.5% | 89.1% |
D4
high
residues 421-583
Domain cluster:
rep: IMGVR_UViG_3300011969_000001-3300011969-Ga0120166_100003832__D4-174
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01583.27 best | APS_kinase | 194.4 | 1.60e-57 | 89.0% | 97.4% |
| PF13671.13 | AAA_33 | 30.3 | 6.60e-07 | 68.7% | 46.9% |