←Back to structures
rifoxyc1_full_scaffold_3_prodigal-single.1__X__X__00086
Bact-Virrifoxyc1_full_scaffold_3_prodigal-single.1__X__X__00086
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-207
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ze0A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.59 | 21.0 | 3.18e-01 | 79.0% | 75.9% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 31.0 | 3.76e-01 | 89.5% | 83.0% |
| 4fffA02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.54 | 33.0 | 3.77e-01 | 82.5% | 79.1% |
| 7c8fA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 38.0 | 3.49e-01 | 90.5% | 55.8% |
| 1p6pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 29.0 | 3.45e-01 | 95.5% | 83.2% |
| 1pbyA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.51 | 27.0 | 3.47e-01 | 86.0% | 92.5% |
| 1lfoA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 29.0 | 3.44e-01 | 95.5% | 85.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5048388 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.59 | 26.0 | 3.34e-01 | 81.5% | 66.7% |
| 3461283 | 77.1.1.8 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › PF28611 | 0.59 | 25.0 | 3.45e-01 | 99.0% | 78.6% |
| 3929502 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.59 | 28.0 | 3.88e-01 | 100.0% | 93.6% |
| 3511696 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.55 | 19.0 | 3.14e-01 | 82.0% | 85.7% |
| 3962288 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.53 | 30.0 | 3.61e-01 | 88.0% | 82.3% |
| 4202712 | 10.1.1.26 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C | 0.51 | 33.0 | 3.67e-01 | 83.0% | 78.8% |
D2
medium
residues 263-322