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rifoxyc1_full_scaffold_3_prodigal-single.1__X__X__00147
Bact-Virrifoxyc1_full_scaffold_3_prodigal-single.1__X__X__00147
Identity
- Kingdom:
- phage
Quality
93.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-142
Domain cluster:
representative
CATH (72)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wueA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.77 | 59.0 | 5.01e-01 | 100.0% | 50.0% |
| 3i10A00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.73 | 55.0 | 4.34e-01 | 100.0% | 39.2% |
| 3aptA00 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.71 | 64.0 | 5.01e-01 | 100.0% | 46.6% |
| 1qfjA02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.70 | 44.0 | 4.49e-01 | 85.6% | 64.4% |
| 2nw0A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.70 | 57.0 | 5.13e-01 | 98.6% | 63.5% |
| 4r33A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 65.0 | 4.64e-01 | 100.0% | 39.8% |
| 6arhA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 63.0 | 4.86e-01 | 99.3% | 45.0% |
| 1fdyB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.69 | 61.0 | 4.77e-01 | 99.3% | 45.4% |
| 3bofA02 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.69 | 59.0 | 4.72e-01 | 95.0% | 48.1% |
| 1b30A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.69 | 64.0 | 4.91e-01 | 100.0% | 48.8% |
| 4wqmA03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.69 | 43.0 | 4.46e-01 | 87.1% | 65.4% |
| 4g9pA01 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.69 | 61.0 | 4.78e-01 | 95.7% | 53.0% |
| 1jcjA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.69 | 59.0 | 4.83e-01 | 100.0% | 50.8% |
| 1tqxA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 55.0 | 4.67e-01 | 100.0% | 53.4% |
| 4ff5A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.68 | 61.0 | 5.13e-01 | 100.0% | 59.0% |
| 2r8wA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 59.0 | 4.60e-01 | 99.3% | 44.1% |
| 2i9uA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.68 | 63.0 | 4.79e-01 | 100.0% | 64.9% |
| 1aq0A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.68 | 61.0 | 4.76e-01 | 100.0% | 62.1% |
| 4gj1A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 58.0 | 4.88e-01 | 100.0% | 55.9% |
| 2o7sA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.67 | 56.0 | 4.70e-01 | 100.0% | 52.8% |
| 1jfxA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.67 | 61.0 | 5.24e-01 | 100.0% | 63.1% |
| 4mwaA00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.67 | 62.0 | 4.98e-01 | 100.0% | 85.4% |
| 2a4aA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.67 | 61.0 | 5.01e-01 | 100.0% | 67.6% |
| 6l25A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.67 | 56.0 | 4.64e-01 | 100.0% | 50.2% |
| 1h09A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.67 | 55.0 | 5.02e-01 | 100.0% | 66.3% |
| 6mv2A03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.66 | 44.0 | 4.53e-01 | 87.1% | 70.4% |
| 4gieA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.66 | 53.0 | 4.19e-01 | 100.0% | 41.7% |
| 3nzpB02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.66 | 60.0 | 4.84e-01 | 100.0% | 59.1% |
| 1yx1A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.65 | 55.0 | 4.52e-01 | 100.0% | 50.4% |
| 1uumA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 59.0 | 4.41e-01 | 100.0% | 47.4% |
| 7e6iA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.65 | 48.0 | 4.43e-01 | 76.3% | 100.0% |
| 1ig3A02 | 3.40.50.10240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain | 0.64 | 38.0 | 3.80e-01 | 75.5% | 55.1% |
| 7drdG01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.64 | 58.0 | 4.69e-01 | 100.0% | 52.1% |
| 6fv3C01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.64 | 57.0 | 4.41e-01 | 100.0% | 43.9% |
| 3qllA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.63 | 58.0 | 4.97e-01 | 100.0% | 68.8% |
| 2btoA01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.62 | 56.0 | 4.53e-01 | 98.6% | 100.0% |
| 1fdrA02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.60 | 43.0 | 4.23e-01 | 89.9% | 67.8% |
| 1gzdA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.59 | 44.0 | 3.98e-01 | 79.1% | 72.8% |
| 2h29A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.59 | 44.0 | 3.94e-01 | 77.0% | 81.4% |
| 5aunB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 53.0 | 4.56e-01 | 100.0% | 72.1% |
| 2ajtA01 | 3.40.50.10940 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 43.0 | 4.05e-01 | 77.7% | 85.1% |
| 1f20A01 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.58 | 40.0 | 3.79e-01 | 87.8% | 59.5% |
| 1jkmA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 52.0 | 3.87e-01 | 100.0% | 70.9% |
| 3tlqA00 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.57 | 51.0 | 4.34e-01 | 100.0% | 74.6% |
| 1qv9A01 | 3.40.50.10830 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) | 0.57 | 53.0 | 5.13e-01 | 100.0% | 100.0% |
| 3v3tA01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.56 | 51.0 | 4.46e-01 | 98.6% | 100.0% |
| 1zccA00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.56 | 51.0 | 4.23e-01 | 100.0% | 64.2% |
| 3ug7C00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 51.0 | 3.96e-01 | 100.0% | 99.7% |
| 1rzuA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.55 | 37.0 | 3.22e-01 | 99.3% | 44.0% |
| 4ew6A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 44.0 | 4.67e-01 | 100.0% | 97.5% |
| 5jd5A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 49.0 | 3.82e-01 | 100.0% | 69.7% |
| 3kjhA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 49.0 | 4.02e-01 | 98.6% | 84.3% |
| 4hlnA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 36.0 | 3.14e-01 | 100.0% | 44.1% |
| 5dxfB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 49.0 | 3.99e-01 | 100.0% | 87.0% |
| 1eucB03 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.54 | 46.0 | 4.54e-01 | 93.5% | 88.4% |
| 4yhsA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 41.0 | 4.30e-01 | 100.0% | 88.1% |
| 1bmtA02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.54 | 49.0 | 4.70e-01 | 97.8% | 90.5% |
| 1zl0B02 | 3.50.30.60 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › LD-carboxypeptidase A C-terminal domain-like | 0.54 | 43.0 | 4.37e-01 | 97.8% | 86.3% |
| 1z2aA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 48.0 | 4.56e-01 | 97.1% | 96.3% |
| 1uqtA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 48.0 | 4.00e-01 | 99.3% | 90.1% |
| 6yb3A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 47.0 | 4.02e-01 | 100.0% | 71.3% |
| 8jx6B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 40.0 | 3.54e-01 | 78.4% | 73.0% |
| 4s1hA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 47.0 | 3.78e-01 | 100.0% | 58.2% |
| 4c0hA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 48.0 | 4.04e-01 | 100.0% | 66.4% |
| 3r0vA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 47.0 | 3.82e-01 | 97.8% | 84.4% |
| 2qjtB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 36.0 | 3.23e-01 | 97.1% | 50.0% |
| 1up7A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 39.0 | 4.00e-01 | 100.0% | 81.0% |
| 3d3kA00 | 3.40.50.10260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › YjeF N-terminal domain | 0.51 | 42.0 | 3.60e-01 | 89.2% | 73.0% |
| 3i45A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 46.0 | 4.26e-01 | 100.0% | 80.6% |
| 4xfkA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 46.0 | 4.00e-01 | 100.0% | 100.0% |
| 1usgA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 46.0 | 4.04e-01 | 100.0% | 92.5% |
| 1ispA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 44.0 | 4.09e-01 | 97.1% | 99.4% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5065370 | 2002.1.1.134 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 | 0.73 | 61.0 | 5.19e-01 | 100.0% | 55.1% |
| 4968358 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.73 | 41.0 | 3.84e-01 | 88.5% | 45.3% |
| 4251437 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.70 | 65.0 | 4.68e-01 | 100.0% | 38.7% |
| 3713154 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.70 | 42.0 | 4.16e-01 | 78.4% | 55.9% |
| 4935184 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.70 | 65.0 | 5.27e-01 | 100.0% | 99.6% |
| 5054246 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.70 | 60.0 | 4.84e-01 | 100.0% | 49.8% |
| 1684230 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.69 | 43.0 | 4.46e-01 | 87.1% | 65.4% |
| 3835138 | 2002.1.1.66 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I | 0.69 | 56.0 | 4.58e-01 | 100.0% | 48.0% |
| 4974367 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.69 | 39.0 | 3.52e-01 | 78.4% | 40.5% |
| 5063001 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.69 | 60.0 | 4.74e-01 | 100.0% | 46.8% |
| 1066802 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.68 | 61.0 | 5.13e-01 | 100.0% | 59.0% |
| 4968452 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.68 | 62.0 | 4.50e-01 | 100.0% | 38.9% |
| 4989511 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.68 | 61.0 | 4.67e-01 | 100.0% | 57.6% |
| 4072199 | 2002.1.1.66 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I | 0.68 | 55.0 | 4.61e-01 | 100.0% | 51.7% |
| 4971884 | 2002.1.1.90 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MTHFR | 0.67 | 61.0 | 4.80e-01 | 100.0% | 60.2% |
| 3943459 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.67 | 57.0 | 4.67e-01 | 100.0% | 51.0% |
| 4948540 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.67 | 61.0 | 5.08e-01 | 100.0% | 58.3% |
| 4013247 | 2002.1.1.134 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 | 0.67 | 61.0 | 4.31e-01 | 100.0% | 38.6% |
| 4971612 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.67 | 61.0 | 4.84e-01 | 100.0% | 56.1% |
| 4882357 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.67 | 51.0 | 4.24e-01 | 79.9% | 86.2% |
| 3707620 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.66 | 41.0 | 3.70e-01 | 77.0% | 44.7% |
| 4935176 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.65 | 60.0 | 4.45e-01 | 100.0% | 44.9% |
| 5067783 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.65 | 37.0 | 4.06e-01 | 70.5% | 68.1% |
| 4021476 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.65 | 41.0 | 3.55e-01 | 76.3% | 40.9% |
| 3388038 | 2002.1.1.232 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Fer4_12 | 0.64 | 59.0 | 4.57e-01 | 100.0% | 47.8% |
| 4049043 | 2002.1.1.43 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › His_biosynth | 0.63 | 56.0 | 4.59e-01 | 100.0% | 53.6% |
| 4140157 | 2003.1.6.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like | 0.62 | 58.0 | 4.05e-01 | 100.0% | 64.8% |
| 3517376 | 7514.1.1.3 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_6 | 0.62 | 45.0 | 4.01e-01 | 75.5% | 67.8% |
| 3808715 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.62 | 57.0 | 4.40e-01 | 100.0% | 54.7% |
| 3600917 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.61 | 45.0 | 4.09e-01 | 90.6% | 58.7% |
| 5024379 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.61 | 54.0 | 4.03e-01 | 97.8% | 88.2% |
| 4272781 | 2007.6.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › PGI | 0.60 | 45.0 | 3.50e-01 | 77.0% | 43.9% |
| 4100507 | 2003.1.6.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like | 0.60 | 53.0 | 4.00e-01 | 97.8% | 88.2% |
| 4938634 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.60 | 42.0 | 4.66e-01 | 100.0% | 90.0% |
| 3598789 | 7573.1.1.0 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like | 0.60 | 54.0 | 5.26e-01 | 97.8% | 91.6% |
| 3736401 | 7514.1.1.3 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_6 | 0.59 | 43.0 | 4.10e-01 | 76.3% | 64.4% |
| None | — | 0.59 | 53.0 | 4.21e-01 | 100.0% | 54.8% | |
| 3250123 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.59 | 53.0 | 3.51e-01 | 100.0% | 27.9% |
| 3958813 | 2007.6.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain | 0.59 | 44.0 | 3.47e-01 | 78.4% | 46.3% |
| 3601075 | 7514.1.1.3 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_6 | 0.58 | 39.0 | 3.84e-01 | 89.9% | 61.3% |
| 3607929 | 7579.1.1.35 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › PGAP1 | 0.58 | 51.0 | 4.00e-01 | 99.3% | 80.6% |
| 4964861 | 2006.1.6.38 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF444 | 0.57 | 52.0 | 4.40e-01 | 97.8% | 78.2% |
| 5026948 | 2004.1.1.67 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA | 0.57 | 52.0 | 4.40e-01 | 99.3% | 69.8% |
| 4052713 | 2487.1.1.18 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › Peptidase_S66C | 0.56 | 45.0 | 4.52e-01 | 98.6% | 83.6% |
| 3788928 | 7514.1.1.0 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain | 0.56 | 46.0 | 4.33e-01 | 87.8% | 72.7% |
| 4002702 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.56 | 44.0 | 3.71e-01 | 84.2% | 52.5% |
| 4338769 | 2007.3.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA | 0.56 | 48.0 | 4.50e-01 | 93.5% | 76.2% |
| 3784175 | 7579.1.1.53 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Say1_Mug180 | 0.56 | 49.0 | 3.49e-01 | 96.4% | 71.6% |
| 5076026 | 2004.1.1.67 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA | 0.56 | 50.0 | 4.02e-01 | 97.1% | 98.1% |
| 4974794 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.56 | 50.0 | 4.69e-01 | 98.6% | 90.0% |
| 4350189 | 247.1.1.29 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2, Anti-Pycsar_Apyc1 | 0.56 | 50.0 | 3.85e-01 | 100.0% | 93.1% |
| None | — | 0.55 | 49.0 | 3.88e-01 | 98.6% | 84.7% | |
| 3440759 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.55 | 45.0 | 4.53e-01 | 100.0% | 87.1% |
| 4979289 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.55 | 49.0 | 3.96e-01 | 100.0% | 96.7% |
| None | — | 0.54 | 48.0 | 3.88e-01 | 95.7% | 97.0% | |
| 4190724 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.54 | 47.0 | 3.78e-01 | 95.0% | 97.0% |
| 3719200 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.54 | 48.0 | 3.70e-01 | 100.0% | 64.3% |
| 2077715 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.53 | 49.0 | 3.80e-01 | 100.0% | 86.4% |
| 3702704 | 207.1.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6 | 0.53 | 47.0 | 3.10e-01 | 97.8% | 31.9% |
| 3618420 | 7512.1.1.54 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Alg14 | 0.53 | 49.0 | 4.20e-01 | 100.0% | 83.3% |
| 3424210 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.53 | 47.0 | 4.66e-01 | 98.6% | 91.0% |
| 3274023 | 7579.1.1.65 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF726 | 0.53 | 46.0 | 3.69e-01 | 97.8% | 81.0% |
| 3703702 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.52 | 42.0 | 4.09e-01 | 100.0% | 76.8% |
| 4200761 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.51 | 45.0 | 3.62e-01 | 97.8% | 86.2% |
| 5004384 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 45.0 | 4.07e-01 | 99.3% | 71.3% |
D2
high
residues 168-325
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05167.18 best | DUF711 | 69.8 | 2.90e-19 | 98.7% | 34.9% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3t1iA02 | 3.30.110.110 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Mre11, capping domain | 0.68 | 40.0 | 5.00e-01 | 83.5% | 95.8% |
| 1f6yA00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.65 | 44.0 | 3.74e-01 | 100.0% | 42.2% |
| 1m6eX02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 40.0 | 3.61e-01 | 91.8% | 45.3% |
| 6xo2A01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 29.0 | 3.44e-01 | 84.2% | 69.5% |
| 1wdkC01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.57 | 33.0 | 3.04e-01 | 84.2% | 41.3% |
| 1telA02 | 3.20.20.110 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain | 0.57 | 41.0 | 3.39e-01 | 100.0% | 41.7% |
| 3qfwB02 | 3.20.20.110 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain | 0.57 | 41.0 | 3.49e-01 | 100.0% | 46.8% |
| 3pubA01 | 1.10.10.2400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain | 0.56 | 28.0 | 3.86e-01 | 97.5% | 98.6% |
| 1g6cB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 34.0 | 3.05e-01 | 100.0% | 42.9% |
| 2pe4A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 50.0 | 3.68e-01 | 100.0% | 47.2% |
| 1uhvA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 50.0 | 3.88e-01 | 100.0% | 50.9% |
| 3kw2B02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.55 | 29.0 | 2.92e-01 | 85.4% | 46.5% |
| 5lp7E01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.55 | 31.0 | 2.91e-01 | 83.5% | 42.4% |
| 1khtB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 43.0 | 4.07e-01 | 100.0% | 72.3% |
| 3c3jA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.51 | 33.0 | 3.14e-01 | 100.0% | 53.6% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5059938 | 2500.1.1.4 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › DUF711 | 0.94 | 74.0 | 5.49e-01 | 100.0% | 37.0% |
| 4981444 | 2500.1.1.4 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › DUF711 | 0.91 | 80.0 | 5.77e-01 | 100.0% | 37.7% |
| 4975367 | 2500.1.1.4 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › DUF711 | 0.89 | 82.0 | 5.66e-01 | 100.0% | 33.2% |
| 4240206 | 2500.1.1.4 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › DUF711 | 0.88 | 80.0 | 5.52e-01 | 100.0% | 32.9% |
| 4955977 | 2500.1.1.4 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › DUF711 | 0.87 | 75.0 | 5.72e-01 | 100.0% | 42.4% |
| 4563841 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.69 | 33.0 | 4.34e-01 | 72.8% | 82.4% |
| 4497590 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.65 | 32.0 | 4.02e-01 | 70.9% | 76.8% |
| 3259105 | 2003.1.5.30 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_7 | 0.64 | 42.0 | 4.23e-01 | 91.8% | 66.5% |
| 4958784 | 1075.1.1.3 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_2 | 0.64 | 49.0 | 4.02e-01 | 80.4% | 89.1% |
| 4075331 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.63 | 31.0 | 3.94e-01 | 71.5% | 80.0% |
| 4064751 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.62 | 30.0 | 3.92e-01 | 70.3% | 80.0% |
| 3597485 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.60 | 39.0 | 3.35e-01 | 94.3% | 42.5% |
| 3473091 | 2003.1.6.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin_3 | 0.59 | 39.0 | 4.03e-01 | 91.8% | 68.4% |
| 4809707 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.58 | 32.0 | 3.11e-01 | 90.5% | 45.4% |
| None | — | 0.58 | 38.0 | 3.52e-01 | 100.0% | 50.5% | |
| 4022631 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.58 | 43.0 | 3.77e-01 | 91.8% | 50.4% |
| 5048552 | 2003.1.1.381 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Pyr_redox_2 | 0.56 | 34.0 | 3.11e-01 | 87.3% | 46.3% |
| 4966543 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.53 | 37.0 | 3.49e-01 | 100.0% | 57.5% |
D3
medium
residues 326-391
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05167.18 best | DUF711 | 44.3 | 1.60e-11 | 93.9% | 12.0% |
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pbkA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.67 | 43.0 | 3.66e-01 | 84.8% | 39.8% |
| 3bmxA02 | 3.40.50.1700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycoside hydrolase family 3 C-terminal domain | 0.62 | 54.0 | 3.77e-01 | 100.0% | 61.0% |
| 2r75102 | 3.30.1330.20 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain | 0.60 | 39.0 | 3.41e-01 | 95.5% | 40.9% |
| 3o1iC01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 52.0 | 4.11e-01 | 100.0% | 79.1% |
| 7febA01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.59 | 51.0 | 4.17e-01 | 100.0% | 86.9% |
| 2vzfA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.59 | 52.0 | 3.77e-01 | 100.0% | 74.2% |
| 1ci9A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.57 | 43.0 | 2.71e-01 | 83.3% | 100.0% |
| 6gs2C01 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.57 | 48.0 | 3.38e-01 | 100.0% | 78.0% |
| 1ursB01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 48.0 | 3.57e-01 | 100.0% | 79.0% |
| 3kegA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.55 | 47.0 | 3.51e-01 | 100.0% | 93.2% |
| 1xg8A00 | 3.40.30.30 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Hypothetical protein sa0798. | 0.55 | 46.0 | 4.05e-01 | 98.5% | 75.9% |
| 6ketA01 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.54 | 41.0 | 2.69e-01 | 84.8% | 35.7% |
| 4mcoA00 | 3.40.190.170 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 | 0.54 | 48.0 | 3.10e-01 | 100.0% | 78.5% |
| 4pbhA00 | 3.40.190.170 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 | 0.54 | 48.0 | 3.09e-01 | 100.0% | 77.6% |
| 1dikA01 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.54 | 44.0 | 3.38e-01 | 90.9% | 66.7% |
| 5tuuA00 | 1.20.140.80 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Transcription factor DP | 0.54 | 44.0 | 3.45e-01 | 90.9% | 68.1% |
| 2hzlB01 | 3.40.190.170 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 | 0.53 | 45.0 | 3.25e-01 | 100.0% | 72.9% |
| 2xxpA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 46.0 | 4.00e-01 | 100.0% | 77.1% |
| 4n6kA00 | 3.40.190.170 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 | 0.53 | 47.0 | 3.04e-01 | 100.0% | 78.1% |
| 2ymbA00 | 3.30.870.30 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › MITD, C-terminal phospholipase D-like domain | 0.53 | 42.0 | 3.27e-01 | 92.4% | 38.6% |
| 4pe3A00 | 3.40.190.170 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 | 0.53 | 46.0 | 3.00e-01 | 100.0% | 77.1% |
| 1y44A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.53 | 43.0 | 2.91e-01 | 92.4% | 42.9% |
| 3ty2A00 | 3.40.1210.10 | Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase | 0.52 | 44.0 | 2.99e-01 | 93.9% | 51.2% |
| 3kosA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 44.0 | 3.88e-01 | 100.0% | 96.1% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4981444 | 2500.1.1.4 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › DUF711 | 0.98 | 89.0 | 5.32e-01 | 95.5% | 16.6% |
| 5059938 | 2500.1.1.4 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › DUF711 | 0.96 | 87.0 | 5.29e-01 | 95.5% | 18.4% |
| 5048562 | 2500.1.1.4 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › DUF711 | 0.94 | 89.0 | 5.23e-01 | 100.0% | 16.9% |
| 4240206 | 2500.1.1.4 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › DUF711 | 0.90 | 85.0 | 4.95e-01 | 100.0% | 14.6% |
| 3599341 | 5051.1.1.0 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like | 0.68 | 53.0 | 3.33e-01 | 86.4% | 72.4% |
| 4468319 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.64 | 40.0 | 3.14e-01 | 93.9% | 28.0% |
| 4936562 | 2007.1.9.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › MCR_C | 0.60 | 51.0 | 3.71e-01 | 100.0% | 73.0% |
| 4886308 | 3253.1.1.1 ↗ | a+b two layers › ferredoxin-like domain in flagellar biosynthesis protein flhA › ferredoxin-like domain in flagellar biosynthesis protein flhA › ferredoxin-like domain in flagellar biosynthesis protein flhA › FHIPEP | 0.59 | 50.0 | 4.44e-01 | 98.5% | 72.0% |
| 3495491 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.59 | 49.0 | 3.49e-01 | 92.4% | 42.5% |
| 3321013 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.58 | 40.0 | 2.41e-01 | 72.7% | 10.0% |
| 1520856 | 7523.1.1.16 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › DctP | 0.57 | 50.0 | 3.95e-01 | 98.5% | 94.1% |
| 5058414 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.56 | 47.0 | 3.12e-01 | 100.0% | 49.8% |
| 3751659 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.56 | 48.0 | 3.90e-01 | 100.0% | 49.2% |
| 1521770 | 7523.1.1.16 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › DctP | 0.54 | 48.0 | 3.93e-01 | 98.5% | 96.6% |
| 4993643 | 7566.1.1.2 ↗ | a/b three-layered sandwiches › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › GTP-bdg_N | 0.54 | 43.0 | 3.24e-01 | 90.9% | 39.4% |
| 5082022 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 39.0 | 3.02e-01 | 78.8% | 45.8% |
| 2062549 | 7523.1.1.16 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › DctP | 0.52 | 46.0 | 3.73e-01 | 98.5% | 93.7% |
| 3962478 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.51 | 41.0 | 2.98e-01 | 95.5% | 80.9% |
| 4107918 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.51 | 43.0 | 3.53e-01 | 100.0% | 70.4% |
| 4931121 | 7523.1.1.6 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Porphobil_deam | 0.50 | 43.0 | 3.63e-01 | 100.0% | 78.3% |