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rifoxyc1_full_scaffold_3_prodigal-single.1__X__X__00194
Bact-Virrifoxyc1_full_scaffold_3_prodigal-single.1__X__X__00194
Identity
- Kingdom:
- phage
Quality
64.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-93
Domain cluster:
rep: MK433262.1__QAY16617.1__SEA_NIMROD_129__00127__D60-125
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2auaA01 | 3.20.170.10 | Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › ADP-ribosylation domain | 0.71 | 57.0 | 5.46e-01 | 87.0% | 89.8% |
| 4eyyQ02 | 3.20.170.50 | Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › Dot/Icm secretion system IcmQ, C-terminal domain | 0.67 | 60.0 | 5.59e-01 | 100.0% | 89.5% |
| 6hmjA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.61 | 36.0 | 3.51e-01 | 78.3% | 52.4% |
| 2wiiC02 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.54 | 29.0 | 3.49e-01 | 98.9% | 78.7% |
| 1rgxA02 | 2.60.40.4230 | Mainly Beta › Sandwich › Immunoglobulin-like › Resistin head domain | 0.50 | 27.0 | 3.13e-01 | 78.3% | 73.4% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3735675 | 237.1.1.36 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › DUF7587 | 0.77 | 63.0 | 5.35e-01 | 87.0% | 99.3% |
| 3274727 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.66 | 54.0 | 4.49e-01 | 97.8% | 51.9% |
| 3597208 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.65 | 60.0 | 4.76e-01 | 100.0% | 62.2% |
| 4952123 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.65 | 42.0 | 5.01e-01 | 85.9% | 100.0% |
| 3255679 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.60 | 54.0 | 4.07e-01 | 97.8% | 45.2% |
| 5026214 | 1.1.5.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › UbiD | 0.56 | 49.0 | 3.86e-01 | 100.0% | 66.2% |
| 4101639 | 1.1.5.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › UbiD | 0.56 | 49.0 | 3.79e-01 | 100.0% | 69.3% |
| 2117154 | 1.1.5.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › UbiD | 0.55 | 48.0 | 3.65e-01 | 100.0% | 66.8% |
| 4992167 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.51 | 42.0 | 2.67e-01 | 91.3% | 33.0% |
| 3546694 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.51 | 36.0 | 3.32e-01 | 93.5% | 56.7% |
| 4189981 | 2008.1.1.37 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NaeI | 0.50 | 40.0 | 3.28e-01 | 93.5% | 44.3% |
D2
high
residues 128-300