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rifoxyd1_full_scaffold_5_prodigal-single.1__X__X__00069
Bact-Virrifoxyd1_full_scaffold_5_prodigal-single.1__X__X__00069
Identity
- Kingdom:
- phage
Quality
75.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-66
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1w99A03 | 2.100.10.10 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain | 0.61 | 49.0 | 3.64e-01 | 93.5% | 48.3% |
| 5lhrA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 52.0 | 4.28e-01 | 100.0% | 77.8% |
| 3afhA02 | 3.90.800.10 | Alpha Beta › Alpha-Beta Complex › Glutamyl-tRNA Synthetase; domain 3 › Glutamyl-tRNA Synthetase; Domain 3 | 0.58 | 52.0 | 4.37e-01 | 100.0% | 68.3% |
| 1wicA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 44.0 | 3.73e-01 | 100.0% | 66.4% |
| 1akpA00 | 2.60.40.230 | Mainly Beta › Sandwich › Immunoglobulin-like › Neocarzinostatin-like | 0.54 | 46.0 | 3.86e-01 | 100.0% | 69.3% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 34.0 | 3.40e-01 | 100.0% | 65.6% |
| 5b0hA00 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.51 | 36.0 | 3.00e-01 | 79.0% | 54.9% |
| 4pqxA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.51 | 42.0 | 4.06e-01 | 96.8% | 97.3% |
| 1ywmA01 | 2.60.500.10 | Mainly Beta › Sandwich › Surface Active Protein fold › Surface Active Protein domain | 0.51 | 38.0 | 3.34e-01 | 100.0% | 53.1% |