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rifoxyd1_full_scaffold_5_prodigal-single.1__X__X__00174
Bact-Virrifoxyd1_full_scaffold_5_prodigal-single.1__X__X__00174
Identity
- Kingdom:
- phage
Quality
86.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-67
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qlzA02 | 6.10.250.2960 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.68 | 46.0 | 4.25e-01 | 70.1% | 68.6% |
| 4p5aC00 | 3.30.1360.170 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.68 | 46.0 | 3.19e-01 | 70.1% | 61.0% |
| 4bzaA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.58 | 41.0 | 4.13e-01 | 79.1% | 73.5% |
| 2pnqA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.55 | 48.0 | 3.02e-01 | 100.0% | 70.4% |
| 2kzyA00 | 1.20.5.4770 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.54 | 34.0 | 3.56e-01 | 77.6% | 69.4% |
| 3s1tA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 35.0 | 3.31e-01 | 70.1% | 88.7% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.56 | 46.0 | 2.88e-01 | 100.0% | 62.0% | |
| 3412803 | 207.1.1.114 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_TMOD-LMOD | 0.56 | 51.0 | 3.48e-01 | 100.0% | 52.2% |
| 3687615 | 109.24.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in dedicator of cytokinesis protein 9 › Helical domain in dedicator of cytokinesis protein 9 | 0.53 | 49.0 | 4.32e-01 | 100.0% | 90.5% |