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rr1
Euk-VirHemileuca_sp._nucleopolyhedrovirus
rr1__YP_008378353__Hemileuca_sp._nucleopolyhedrovirus__1367203
Identity
- Accession:
- YP_008378353 ↗
- Protein ID:
- rr1
- Kingdom:
- euk
Quality
89.8
mean pLDDT
Taxonomy
TaxID: 1367203
Cluster
View cluster (122 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-100
Domain cluster:
rep: IMGVR_UViG_3300007266_000133-3300007266-Ga0101450_1063124__D4-90
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03477.22 best | ATP-cone | 44.5 | 2.70e-11 | 100.0% | 97.7% |
D2
medium
residues 115-217
Domain cluster:
rep: ribonucleotide_reductase_large_subunit__YP_232955__Vaccinia_virus__10245__D133-214
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00317.27 best | Ribonuc_red_lgN | 78.7 | 3.80e-22 | 70.9% | 96.1% |
D3
medium
residues 218-333_403-452
Domain cluster:
rep: ribonucleotide_reductase_large_subunit__YP_009702292__African_swine_fever_virus__10497__D187-309_381-436_716-757
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02867.21 best | Ribonuc_red_lgC | 147.6 | 7.30e-43 | 70.5% | 21.9% |
| PF02867.21 | Ribonuc_red_lgC | 67.1 | 1.70e-18 | 31.3% | 9.9% |
D4
medium
residues 334-402
Domain cluster:
rep: IMGVR_UViG_3300007266_000133-3300007266-Ga0101450_1063125__D8-101
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02867.21 best | Ribonuc_red_lgC | 69.1 | 4.30e-19 | 100.0% | 13.2% |
D5
medium
residues 453-613_683-740
Domain cluster:
rep: rr1__YP_009552690__Operophtera_brumata_nucleopolyhedrovirus__1046267__D445-618_684-706
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02867.21 best | Ribonuc_red_lgC | 187.9 | 4.30e-55 | 74.4% | 29.6% |
| PF02867.21 | Ribonuc_red_lgC | 61.5 | 8.60e-17 | 27.4% | 11.5% |
D6
medium
residues 614-682_741-756
Domain cluster:
rep: IMGVR_UViG_3300006567_000026-3300006567-Ga0099958_11086953__D213-268
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02867.21 best | Ribonuc_red_lgC | 59.9 | 2.70e-16 | 96.5% | 13.9% |