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rr1

Euk-Vir

Operophtera_brumata_nucleopolyhedrovirus

rr1__YP_009552690__Operophtera_brumata_nucleopolyhedrovirus__1046267

Identity

Accession:
YP_009552690 ↗
Protein ID:
rr1
Kingdom:
euk

Quality

90.2 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Operophtera_brumata_nucleopolyhedrovirus

TaxID: 1046267

Cluster

View cluster (122 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 15-97
PDB
Domain cluster: rep: RR1__YP_010087146__Spodoptera_eridania_nucleopolyhedrovirus__2315721__D152-233
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03477.22 best ATP-cone 35.5 1.60e-08 100.0% 93.2%
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3nqxA02 1.10.390.10 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 0.72 63.0 5.14e-01 94.0% 95.2%
4uurA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.69 47.0 4.17e-01 71.1% 96.0%
2d05A02 1.20.141.10 Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 0.66 55.0 4.98e-01 91.6% 74.8%
4ioeA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.66 35.0 3.52e-01 97.6% 49.4%
6bmeA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.65 47.0 4.08e-01 75.9% 89.0%
2gs4A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.64 52.0 4.19e-01 88.0% 81.6%
2pkeA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.61 48.0 4.96e-01 88.0% 97.4%
2c41C01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.59 48.0 3.95e-01 86.7% 82.6%
2hoqA02 1.10.150.520 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.59 44.0 4.54e-01 91.6% 86.1%
3lfuA02 1.10.10.160 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.59 44.0 4.74e-01 98.8% 95.7%
1sqgA01 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.56 45.0 3.88e-01 91.6% 64.5%
2of5H00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.56 38.0 3.66e-01 98.8% 60.0%
1hu3A00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.55 46.0 3.48e-01 92.8% 40.7%
3hzsA00 1.10.3810.10 Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like 0.54 41.0 3.19e-01 84.3% 41.1%
2yogA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 40.0 3.11e-01 79.5% 46.2%
4l8kA01 3.30.750.44 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › 0.54 46.0 4.53e-01 98.8% 93.3%
1zoyB02 1.10.1060.10 Mainly Alpha › Orthogonal Bundle › Fumarate Reductase Iron-sulfur Protein; Chain B, domain 2 › Alpha-helical ferredoxin 0.54 42.0 3.68e-01 88.0% 94.7%
2fu2A00 1.20.1440.50 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like 0.52 39.0 4.05e-01 81.9% 92.3%
2pqrA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 42.0 4.11e-01 89.2% 80.6%
2i2xB01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.50 41.0 3.87e-01 89.2% 78.0%
1khyD00 1.10.1780.10 Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain 0.50 42.0 3.66e-01 98.8% 99.3%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3486229 103.2.1.0 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone 0.98 94.0 9.14e-01 100.0% 94.4%
3394718 103.2.1.2 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.98 68.0 7.82e-01 71.1% 96.8%
3607359 103.2.1.1 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › Ribonuc_red_lgN 0.97 80.0 5.73e-01 85.5% 35.6%
3519243 1074.1.1.0 ↗ alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases 0.97 80.0 5.76e-01 85.5% 37.5%
3784313 103.2.1.2 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.96 92.0 8.93e-01 100.0% 92.2%
3594048 103.2.1.0 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone 0.96 92.0 8.89e-01 100.0% 94.4%
2320584 103.2.1.2 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.96 91.0 8.58e-01 100.0% 87.6%
4312875 103.2.1.0 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone 0.92 87.0 8.25e-01 100.0% 88.4%
4257906 103.2.1.2 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.92 86.0 8.37e-01 100.0% 93.3%
2791177 103.2.1.2 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.89 84.0 7.63e-01 100.0% 78.3%
4961006 103.2.1.2 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.89 74.0 7.78e-01 96.4% 96.0%
1853272 103.2.1.2 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.89 83.0 7.80e-01 100.0% 84.8%
4942297 103.2.1.2 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.88 68.0 7.41e-01 90.4% 95.7%
4987113 103.2.1.0 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone 0.88 74.0 7.82e-01 98.8% 98.7%
5043182 103.2.1.2 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.87 82.0 7.61e-01 100.0% 97.0%
4987957 103.2.1.0 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone 0.87 74.0 7.80e-01 100.0% 100.0%
1878968 103.2.1.2 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.87 80.0 7.49e-01 100.0% 83.0%
4954173 103.2.1.2 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.86 70.0 7.39e-01 96.4% 96.0%
4485359 103.2.1.0 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone 0.86 78.0 7.46e-01 97.6% 85.3%
4980139 103.2.1.0 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone 0.85 79.0 7.40e-01 98.8% 93.0%
5057092 103.2.1.2 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.85 65.0 7.05e-01 90.4% 95.7%
5017312 103.2.1.2 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.85 73.0 7.42e-01 100.0% 95.0%
4979817 103.2.1.0 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone 0.84 65.0 6.70e-01 91.6% 85.0%
4948420 103.2.1.2 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.83 71.0 7.28e-01 100.0% 95.0%
4952141 103.2.1.2 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.83 69.0 7.07e-01 98.8% 92.5%
5010578 103.2.1.2 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.82 75.0 7.26e-01 100.0% 90.0%
4997983 103.2.1.2 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.78 65.0 6.78e-01 98.8% 98.7%
3610347 103.2.1.0 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone 0.72 59.0 5.91e-01 89.2% 92.9%
4170883 103.7.1.2 ↗ alpha arrays › RuvA-C › Hypothetical protein MTH1615 › Hypothetical protein MTH1615 › DUF494 0.71 57.0 5.36e-01 89.2% 72.0%
3987696 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.68 40.0 3.16e-01 98.8% 29.1%
3239394 509.1.1.0 ↗ alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain 0.64 41.0 4.39e-01 79.5% 77.1%
5078022 592.2.1.0 ↗ alpha arrays › PWI domain-like › YugE-like › YugE-like 0.60 48.0 4.94e-01 90.4% 95.0%
3965496 4040.1.1.1 ↗ alpha bundles › Fic-like › Fic-like › Fic-like › Fic 0.60 50.0 3.79e-01 96.4% 95.5%
4995419 592.2.1.0 ↗ alpha arrays › PWI domain-like › YugE-like › YugE-like 0.58 46.0 4.66e-01 89.2% 92.9%
3654409 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 45.0 4.07e-01 90.4% 60.9%
5052463 3273.1.1.0 ↗ alpha arrays › Filamentous archaeal viruses coat proteins › Filamentous archaeal viruses coat proteins › Filamentous archaeal viruses coat proteins 0.58 47.0 4.80e-01 94.0% 100.0%
3588019 633.31.1.0 ↗ alpha bundles › Bromodomain-like › Four-helical bundle insertion domain in pyruvate-ferredoxin oxidoreductase › Four-helical bundle insertion domain in pyruvate-ferredoxin oxidoreductase 0.57 42.0 4.49e-01 77.1% 95.7%
3202030 592.1.1.0 ↗ alpha arrays › PWI domain-like › PWI domain › PWI domain 0.56 39.0 3.87e-01 88.0% 70.6%
3385104 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.56 43.0 4.39e-01 85.5% 87.5%
4012688 592.1.1.0 ↗ alpha arrays › PWI domain-like › PWI domain › PWI domain 0.55 39.0 3.63e-01 89.2% 58.1%
3690022 592.1.1.2 ↗ alpha arrays › PWI domain-like › PWI domain › PWI domain › Helicase_PWI 0.55 38.0 3.94e-01 89.2% 76.2%
3187211 592.1.1.2 ↗ alpha arrays › PWI domain-like › PWI domain › PWI domain › Helicase_PWI 0.55 38.0 3.45e-01 88.0% 51.7%
4003475 101.1.2.166 ↗ alpha arrays › HTH › HTH › winged helix domain › MCM6_C 0.54 37.0 3.54e-01 71.1% 91.0%
4977761 4995.1.1.1 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.54 43.0 4.27e-01 90.4% 87.8%
3753507 592.1.1.1 ↗ alpha arrays › PWI domain-like › PWI domain › PWI domain › PWI 0.53 41.0 4.22e-01 100.0% 92.5%
4589 109.4.1.32 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G 0.53 44.0 4.19e-01 100.0% 77.6%
3416922 109.4.1.1199 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_Nup160_C 0.52 44.0 3.10e-01 91.6% 36.7%
3289277 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.51 44.0 2.81e-01 100.0% 42.1%
3938072 632.2.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains 0.51 42.0 4.33e-01 96.4% 95.0%
3626178 592.7.1.1 ↗ alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2 0.51 40.0 3.95e-01 90.4% 82.2%
D2 medium residues 214-333_396-444
PDB
Domain cluster: rep: IMGVR_UViG_3300042092_000730-3300042092-Ga0453238_010587_859_2079__D220-402
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF02867.21 best Ribonuc_red_lgC 156.9 1.00e-45 71.0% 22.1%
PF02867.21 Ribonuc_red_lgC 61.8 7.00e-17 29.0% 9.5%
D3 medium residues 445-618_684-706
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02867.21 best Ribonuc_red_lgC 229.3 1.20e-67 90.4% 34.2%
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wghA00 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 1.00 98.0 6.46e-01 100.0% 37.4%
1xjkA00 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.93 90.0 6.04e-01 100.0% 42.1%
1r1rA02 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.93 90.0 6.36e-01 100.0% 40.4%
1peqA02 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.91 89.0 6.36e-01 100.0% 51.7%
1l1lA01 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.77 66.0 4.72e-01 100.0% 34.1%
2bvdA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.67 41.0 3.60e-01 100.0% 42.4%
3bqyA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.60 33.0 3.76e-01 74.1% 69.3%
4m0mA03 1.20.1270.430 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.60 21.0 3.38e-01 97.5% 81.0%
3vk5B00 3.20.20.390 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases 0.57 34.0 3.15e-01 100.0% 44.4%
4ay7A00 3.20.20.210 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.56 46.0 3.80e-01 100.0% 50.1%
1r85A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.55 40.0 3.28e-01 100.0% 39.6%
7dvqK01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.54 31.0 3.31e-01 74.1% 62.4%
4ap2B01 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.52 32.0 3.80e-01 93.4% 89.6%
6qkgA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 44.0 3.53e-01 100.0% 47.1%
1c17M00 1.20.120.220 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ATP synthase, F0 complex, subunit A 0.51 32.0 3.67e-01 75.6% 85.2%
3bxjB03 1.10.506.10 Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › GTPase Activation - p120gap; domain 1 0.50 39.0 3.86e-01 82.2% 99.5%
2fq4A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.50 30.0 3.55e-01 78.7% 83.9%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3823652 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 1.00 99.0 6.70e-01 100.0% 49.9%
4015532 2500.1.1.0 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 1.00 99.0 6.67e-01 100.0% 45.9%
996122 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.99 98.0 6.61e-01 100.0% 46.0%
4298539 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.97 95.0 6.57e-01 100.0% 47.5%
4990406 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.96 94.0 6.36e-01 100.0% 50.8%
4994375 2500.1.1.0 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.96 94.0 6.63e-01 100.0% 53.4%
4934525 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.96 94.0 6.46e-01 100.0% 48.8%
4564490 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.94 92.0 6.30e-01 100.0% 51.1%
4822330 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.94 92.0 6.67e-01 100.0% 55.5%
4190659 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.94 92.0 6.00e-01 100.0% 57.9%
5058546 2500.1.1.0 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.94 91.0 6.14e-01 100.0% 51.0%
5030208 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.94 91.0 6.13e-01 100.0% 47.6%
3963206 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.93 91.0 6.30e-01 100.0% 43.0%
4145444 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.93 91.0 6.34e-01 100.0% 44.2%
3942765 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.93 91.0 6.31e-01 100.0% 43.8%
3500621 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.92 90.0 6.32e-01 100.0% 43.1%
2504767 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.92 90.0 6.31e-01 100.0% 46.9%
4067125 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.91 89.0 6.26e-01 100.0% 44.1%
3972491 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.91 89.0 6.06e-01 100.0% 49.6%
3590466 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.91 89.0 6.14e-01 100.0% 45.0%
5040104 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.90 88.0 6.22e-01 100.0% 47.3%
4937370 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.90 88.0 5.92e-01 100.0% 50.7%
4985374 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.86 84.0 5.71e-01 100.0% 41.4%
4993733 2500.1.1.0 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.86 84.0 5.77e-01 100.0% 43.5%
4963031 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.86 83.0 5.62e-01 100.0% 43.0%
2472944 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.78 76.0 5.58e-01 100.0% 49.8%
4825675 2500.1.1.0 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.74 47.0 4.24e-01 82.7% 49.6%
4934859 2500.1.1.0 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.70 61.0 4.59e-01 100.0% 41.6%
5051775 2500.1.1.9 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › RNR-II_ins_dom 0.68 66.0 4.73e-01 100.0% 40.6%
4208725 2500.1.1.0 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.68 66.0 4.67e-01 100.0% 39.6%
5027411 2500.1.1.0 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.61 54.0 3.86e-01 100.0% 33.5%
3503848 601.4.1.38 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › RHG29_45_N 0.55 31.0 3.64e-01 84.3% 77.1%
4972548 1076.1.1.4 ↗ alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › PrsW-protease 0.55 43.0 4.59e-01 93.4% 94.7%
4027931 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 37.0 3.30e-01 75.1% 70.7%
D4 medium residues 619-683
PDB
Domain cluster: rep: IMGVR_UViG_3300006567_000026-3300006567-Ga0099958_11086953__D213-268
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02867.21 best Ribonuc_red_lgC 51.9 7.10e-14 100.0% 12.2%