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rr1
Euk-VirHyposidra_talaca_nucleopolyhedrovirus
rr1__YP_010086408__Hyposidra_talaca_nucleopolyhedrovirus__1070315
Identity
- Accession:
- YP_010086408 ↗
- Protein ID:
- rr1
- Kingdom:
- euk
Quality
93.0
mean pLDDT
Taxonomy
TaxID: 1070315
Cluster
View cluster (122 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 15-94
Domain cluster:
rep: IMGVR_UViG_3300007266_000133-3300007266-Ga0101450_1063124__D4-90
D2
medium
residues 214-292
Domain cluster:
rep: MW074125.1__QXO06237.1__X__00148__D220-303
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02867.21 best | Ribonuc_red_lgC | 91.0 | 9.80e-26 | 100.0% | 14.9% |
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wghA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.98 | 95.0 | 5.40e-01 | 100.0% | 12.4% |
| 1xjkA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.93 | 84.0 | 4.80e-01 | 100.0% | 12.0% |
| 1peqA02 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.91 | 81.0 | 4.79e-01 | 100.0% | 15.3% |
| 1l1lA02 | 3.30.1620.10 | Alpha Beta › 2-Layer Sandwich › b-12 dependent (class ii) ribonucleotide reductase, Chain A, Domain 2 › b-12 dependent (class ii) ribonucleotide reductase, Chain A, Domain 2 | 0.85 | 74.0 | 6.51e-01 | 93.7% | 70.5% |
| 1ez4B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.75 | 51.0 | 4.20e-01 | 100.0% | 39.0% |
| 1p0kA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.74 | 55.0 | 3.63e-01 | 100.0% | 20.3% |
| 3pvsB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.73 | 54.0 | 4.30e-01 | 100.0% | 40.4% |
| 3vpgA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.73 | 49.0 | 4.07e-01 | 97.5% | 39.0% |
| 2jjmA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.69 | 48.0 | 3.67e-01 | 100.0% | 31.8% |
| 4uulA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.69 | 52.0 | 4.22e-01 | 100.0% | 42.1% |
| 1xwyA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.68 | 50.0 | 3.49e-01 | 100.0% | 23.8% |
| 4bguA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.67 | 48.0 | 3.96e-01 | 98.7% | 41.5% |
| 4s1wB01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.67 | 39.0 | 2.94e-01 | 100.0% | 23.4% |
| 2js7A01 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.67 | 37.0 | 3.12e-01 | 84.8% | 31.6% |
| 4ljkG00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.66 | 43.0 | 3.16e-01 | 100.0% | 24.9% |
| 1telA02 | 3.20.20.110 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain | 0.66 | 53.0 | 3.62e-01 | 100.0% | 24.7% |
| 6rqaA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.65 | 42.0 | 3.32e-01 | 86.1% | 30.6% |
| 2qs7A00 | 3.40.1260.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like | 0.61 | 56.0 | 4.60e-01 | 100.0% | 67.4% |
| 3cz8A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 46.0 | 3.27e-01 | 100.0% | 26.1% |
| 3pnxA00 | 3.40.1260.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like | 0.61 | 56.0 | 4.38e-01 | 100.0% | 70.6% |
| 2j5vB01 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.60 | 52.0 | 3.83e-01 | 100.0% | 54.5% |
| 2wk1A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 52.0 | 3.67e-01 | 97.5% | 34.3% |
| 5niiB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 47.0 | 3.68e-01 | 100.0% | 38.0% |
| 3u9rB01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.59 | 52.0 | 3.62e-01 | 100.0% | 28.9% |
| 3kxqA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 52.0 | 3.72e-01 | 100.0% | 33.3% |
| 3ooyA01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.58 | 51.0 | 3.52e-01 | 100.0% | 33.3% |
| 2i0fA00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.57 | 49.0 | 4.11e-01 | 100.0% | 68.0% |
| 3gy1B02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.57 | 51.0 | 3.62e-01 | 100.0% | 37.8% |
| 1gehA02 | 3.20.20.110 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain | 0.57 | 51.0 | 3.43e-01 | 100.0% | 36.4% |
| 4yrbA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 47.0 | 3.59e-01 | 100.0% | 52.9% |
| 6hcdD00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 43.0 | 3.69e-01 | 100.0% | 51.9% |
| 4tm3A00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 40.0 | 2.62e-01 | 82.3% | 26.6% |
| 2yrmA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.53 | 22.0 | 3.01e-01 | 88.6% | 67.6% |
| 3hebA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 46.0 | 3.82e-01 | 98.7% | 99.3% |
| 4ry8A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 46.0 | 3.79e-01 | 100.0% | 56.1% |
| 3ty2A00 | 3.40.1210.10 | Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase | 0.52 | 43.0 | 3.04e-01 | 89.9% | 59.2% |
| 1jmvA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 47.0 | 3.87e-01 | 100.0% | 56.4% |
| 3ksmA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 46.0 | 3.97e-01 | 100.0% | 67.5% |
| 2i5bA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 45.0 | 3.13e-01 | 100.0% | 36.8% |
| 4s1hA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 44.0 | 3.06e-01 | 100.0% | 34.5% |
| 4da2A02 | 3.40.1350.60 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.51 | 45.0 | 3.65e-01 | 100.0% | 53.3% |
| 5hsgA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 44.0 | 3.86e-01 | 100.0% | 65.6% |
| 2zskA01 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 44.0 | 3.96e-01 | 100.0% | 82.8% |
| 4rk2A00 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.50 | 38.0 | 2.47e-01 | 82.3% | 21.6% |
| 2bi7A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 43.0 | 3.29e-01 | 100.0% | 53.2% |
ECOD (68)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4015532 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.99 | 97.0 | 5.53e-01 | 100.0% | 13.9% |
| 3823652 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.99 | 96.0 | 5.52e-01 | 100.0% | 14.2% |
| 4298539 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.97 | 93.0 | 5.38e-01 | 100.0% | 14.6% |
| 2472944 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.96 | 80.0 | 4.77e-01 | 100.0% | 15.3% |
| 4985374 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.96 | 90.0 | 5.20e-01 | 100.0% | 13.6% |
| 4963031 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.96 | 90.0 | 5.17e-01 | 100.0% | 12.9% |
| 4937370 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.95 | 90.0 | 5.13e-01 | 100.0% | 12.9% |
| 5030208 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.94 | 89.0 | 5.08e-01 | 100.0% | 12.7% |
| 3500621 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.94 | 89.0 | 5.22e-01 | 100.0% | 15.0% |
| 3972491 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.94 | 90.0 | 5.18e-01 | 100.0% | 13.7% |
| 4564490 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.94 | 88.0 | 5.10e-01 | 100.0% | 13.9% |
| 4934525 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.94 | 88.0 | 5.11e-01 | 100.0% | 14.3% |
| 4067125 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.93 | 88.0 | 5.18e-01 | 100.0% | 15.3% |
| 2504767 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.93 | 88.0 | 5.16e-01 | 100.0% | 15.4% |
| 4990406 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.93 | 89.0 | 5.11e-01 | 100.0% | 14.6% |
| 5063882 | 1074.1.1.6 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgC | 0.93 | 88.0 | 5.46e-01 | 100.0% | 22.0% |
| 996122 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.93 | 90.0 | 5.16e-01 | 100.0% | 13.7% |
| 4190659 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.93 | 89.0 | 5.04e-01 | 100.0% | 11.9% |
| 3590466 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.93 | 88.0 | 5.10e-01 | 100.0% | 14.3% |
| 3958480 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.93 | 85.0 | 5.27e-01 | 97.5% | 20.5% |
| 4994375 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.93 | 86.0 | 5.06e-01 | 98.7% | 15.4% |
| 4993733 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.93 | 87.0 | 5.05e-01 | 100.0% | 14.2% |
| 5040104 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.92 | 87.0 | 5.10e-01 | 100.0% | 15.3% |
| 5058546 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.92 | 88.0 | 5.04e-01 | 100.0% | 13.2% |
| 3942765 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.92 | 86.0 | 5.03e-01 | 100.0% | 14.7% |
| 4145444 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.92 | 86.0 | 5.04e-01 | 100.0% | 14.9% |
| 3963206 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.92 | 86.0 | 5.02e-01 | 100.0% | 14.5% |
| 4335947 | 3005.1.1.1 ↗ | a+b three layers › B12-dependent (class II) ribonucleotide reductase, insertion domain › B12-dependent (class II) ribonucleotide reductase, insertion domain › B12-dependent (class II) ribonucleotide reductase, insertion domain › RNR-II_ins_dom | 0.85 | 75.0 | 6.33e-01 | 94.9% | 64.0% |
| 4208725 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.84 | 73.0 | 4.37e-01 | 93.7% | 14.8% |
| 4522651 | 3005.1.1.1 ↗ | a+b three layers › B12-dependent (class II) ribonucleotide reductase, insertion domain › B12-dependent (class II) ribonucleotide reductase, insertion domain › B12-dependent (class II) ribonucleotide reductase, insertion domain › RNR-II_ins_dom | 0.83 | 72.0 | 7.23e-01 | 93.7% | 92.5% |
| 4984338 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.68 | 43.0 | 3.62e-01 | 86.1% | 37.8% |
| 4295946 | 328.9.1.1 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF | 0.68 | 56.0 | 5.36e-01 | 100.0% | 77.8% |
| 5017198 | 7545.1.1.1 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DsrE | 0.65 | 53.0 | 4.71e-01 | 100.0% | 61.4% |
| 5033488 | 7545.1.1.1 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DsrE | 0.65 | 53.0 | 4.64e-01 | 97.5% | 60.5% |
| 5024506 | 7545.1.1.3 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DrsE_2 | 0.64 | 59.0 | 4.88e-01 | 100.0% | 65.9% |
| 5019172 | 7545.1.1.1 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DsrE | 0.63 | 51.0 | 4.38e-01 | 100.0% | 55.2% |
| 4997946 | 7545.1.1.3 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DrsE_2 | 0.63 | 53.0 | 4.62e-01 | 100.0% | 61.0% |
| 3231459 | 2006.1.2.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › CDC45 | 0.63 | 48.0 | 3.11e-01 | 81.0% | 87.5% |
| 4962917 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.63 | 54.0 | 4.45e-01 | 100.0% | 52.4% |
| None | — | 0.63 | 58.0 | 4.56e-01 | 100.0% | 71.6% | |
| 3647976 | 2006.1.2.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases | 0.63 | 49.0 | 3.46e-01 | 83.5% | 79.6% |
| 5008349 | 7545.1.1.3 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DrsE_2 | 0.62 | 57.0 | 4.83e-01 | 100.0% | 68.0% |
| 4945217 | 7545.1.1.3 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DrsE_2 | 0.61 | 57.0 | 4.67e-01 | 100.0% | 65.9% |
| 5011787 | 7545.1.1.1 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DsrE | 0.61 | 56.0 | 4.76e-01 | 100.0% | 64.0% |
| 4982634 | 7545.1.1.0 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like | 0.61 | 56.0 | 4.63e-01 | 100.0% | 65.2% |
| 4991441 | 7545.1.1.3 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DrsE_2 | 0.61 | 56.0 | 4.58e-01 | 100.0% | 64.7% |
| 5079358 | 7539.1.1.1 ↗ | a/b three-layered sandwiches › Creatininase › Creatininase › Creatininase › Creatininase | 0.60 | 54.0 | 3.74e-01 | 100.0% | 46.2% |
| 4992249 | 7545.1.1.1 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DsrE | 0.60 | 54.0 | 4.57e-01 | 100.0% | 68.2% |
| 863091 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.60 | 48.0 | 4.31e-01 | 100.0% | 62.3% |
| 2131271 | 2003.1.2.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2,Pyr_redox_2 | 0.59 | 47.0 | 4.02e-01 | 100.0% | 51.9% |
| 4993793 | 7545.1.1.3 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DrsE_2 | 0.59 | 54.0 | 4.50e-01 | 100.0% | 66.7% |
| 2140326 | 2003.1.2.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.59 | 47.0 | 4.29e-01 | 100.0% | 63.4% |
| 2138551 | 2003.1.2.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2,Pyr_redox_2 | 0.59 | 48.0 | 4.12e-01 | 100.0% | 54.5% |
| 4982083 | 7545.1.1.3 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DrsE_2 | 0.58 | 53.0 | 4.39e-01 | 98.7% | 66.7% |
| 4944927 | 7545.1.1.3 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DrsE_2 | 0.58 | 53.0 | 4.27e-01 | 100.0% | 72.0% |
| 4932710 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.58 | 51.0 | 3.52e-01 | 100.0% | 28.4% |
| 2817077 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.58 | 53.0 | 4.08e-01 | 100.0% | 53.3% |
| 4487962 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.57 | 50.0 | 4.15e-01 | 100.0% | 59.5% |
| 5052045 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.57 | 50.0 | 3.80e-01 | 100.0% | 42.6% |
| 4099547 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.57 | 43.0 | 3.56e-01 | 82.3% | 53.5% |
| 1734609 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.55 | 47.0 | 4.25e-01 | 100.0% | 93.2% |
| 3968073 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.55 | 47.0 | 3.95e-01 | 100.0% | 53.8% |
| 3392118 | 304.107.1.0 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain | 0.55 | 42.0 | 2.57e-01 | 84.8% | 17.6% |
| 3954644 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.55 | 48.0 | 3.90e-01 | 100.0% | 61.3% |
| 3250157 | 7504.1.1.2 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T | 0.53 | 41.0 | 3.18e-01 | 93.7% | 36.2% |
| 4039685 | 2004.1.1.105 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinase-PPPase | 0.52 | 47.0 | 4.07e-01 | 100.0% | 67.5% |
| 4971636 | 7539.1.1.1 ↗ | a/b three-layered sandwiches › Creatininase › Creatininase › Creatininase › Creatininase | 0.51 | 45.0 | 3.21e-01 | 100.0% | 52.8% |
| 5056760 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.51 | 44.0 | 3.43e-01 | 100.0% | 63.2% |
D3
medium
residues 293-423
Domain cluster:
rep: ribonucleotide-diphosphate_reductase_large_chain__YP_009119180__Pandoravirus_inopinatum__1605721__D783-936
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02867.21 best | Ribonuc_red_lgC | 164.3 | 6.20e-48 | 100.0% | 25.2% |
D4
medium
residues 424-618_683-702
Domain cluster:
rep: rr1__YP_009552690__Operophtera_brumata_nucleopolyhedrovirus__1046267__D445-618_684-706
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02867.21 best | Ribonuc_red_lgC | 256.2 | 8.80e-76 | 92.1% | 38.0% |
D5
medium
residues 619-682
Domain cluster:
rep: IMGVR_UViG_3300006567_000026-3300006567-Ga0099958_11086953__D213-268
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02867.21 best | Ribonuc_red_lgC | 45.7 | 5.50e-12 | 100.0% | 11.8% |