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scnpilot_solids1_trim150_scaffold_46_prodigal-single.1__X__X__00058

Bact-Vir

scnpilot_solids1_trim150_scaffold_46_prodigal-single.1__X__X__00058

Identity

Kingdom:
phage

Quality

88.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 22-48_118-201
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fpnA01 3.30.2030.10 Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like 0.68 51.0 4.70e-01 78.4% 80.7%
3l4rA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.65 50.0 4.54e-01 81.1% 92.1%
2ra6C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.65 50.0 4.56e-01 81.1% 97.9%
1epaA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 48.0 4.28e-01 80.2% 87.5%
3ostA00 3.30.310.220 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Fungal kinase associated-1 domain 0.63 43.0 4.28e-01 70.3% 82.4%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 44.0 3.80e-01 72.1% 90.6%
3qkgA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 47.0 4.18e-01 80.2% 87.8%
2xstA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 47.0 4.29e-01 80.2% 89.9%
1kyfA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.62 43.0 4.37e-01 73.0% 89.4%
2gfgA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.62 55.0 4.55e-01 97.3% 98.4%
3klxB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 43.0 3.71e-01 73.9% 80.7%
3ijtB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 42.0 3.92e-01 72.1% 90.9%
5h9kA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 46.0 4.10e-01 80.2% 83.1%
2hzrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 45.0 3.96e-01 79.3% 82.6%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 45.0 3.89e-01 80.2% 85.7%
2cm4A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 44.0 4.04e-01 81.1% 89.0%
3eliA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 40.0 3.71e-01 71.2% 94.4%
6mw4A01 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.56 42.0 4.05e-01 79.3% 79.2%
2il5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 39.0 3.46e-01 72.1% 92.0%
3wjcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 41.0 3.71e-01 78.4% 88.2%
3ck1A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 37.0 3.44e-01 70.3% 65.7%
2ffsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 38.0 3.53e-01 73.9% 79.3%
1zo0A00 3.40.630.60 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › 0.53 38.0 3.66e-01 73.9% 88.1%
4e3eA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 44.0 3.12e-01 91.0% 75.5%
1pn2B01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 39.0 3.52e-01 76.6% 57.4%
2xklA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 40.0 3.63e-01 81.1% 82.6%
3omlA03 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 42.0 3.23e-01 88.3% 55.6%
2fs2B00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 36.0 3.36e-01 72.1% 87.0%
2essA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 37.0 3.44e-01 76.6% 67.1%
3kh8B01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.50 35.0 3.11e-01 71.2% 51.9%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.50 30.0 3.64e-01 82.0% 97.1%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3886734 331.4.1.7 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › DUF1499 0.69 51.0 4.43e-01 76.6% 77.0%
3439826 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.69 49.0 4.47e-01 74.8% 99.3%
5038083 331.9.1.0 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.68 48.0 4.66e-01 73.0% 80.6%
6336 331.13.1.1 ↗ a+b two layers › TBP-like › YwmB-like › YwmB-like › DUF1779 0.68 51.0 4.13e-01 78.4% 55.1%
3875866 9.1.1.11 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 0.66 46.0 3.97e-01 72.1% 94.7%
3854952 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.64 49.0 4.42e-01 80.2% 88.7%
3883246 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.63 48.0 4.18e-01 80.2% 84.1%
4050475 331.9.1.1 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Alpha_adaptin_C 0.62 44.0 4.26e-01 73.0% 80.5%
3958686 331.3.1.20 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C 0.62 43.0 3.51e-01 73.0% 70.5%
4032043 331.3.1.9 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.61 42.0 3.70e-01 71.2% 92.1%
4100001 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.60 46.0 3.88e-01 80.2% 78.7%
3550677 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.60 46.0 3.89e-01 80.2% 83.3%
4233258 331.3.1.19 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VanA_C 0.58 41.0 3.37e-01 73.0% 67.9%
3961324 331.3.1.20 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C 0.58 41.0 3.41e-01 73.9% 71.9%
4976589 331.10.2.0 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.58 42.0 4.51e-01 76.6% 96.8%
3953766 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.55 40.0 3.32e-01 73.9% 92.4%
3293091 9.1.1.33 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF1365 0.55 40.0 3.29e-01 75.7% 83.1%
3789272 222.1.1.20 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MFE-2_hydrat-2_N 0.54 38.0 3.46e-01 73.0% 55.3%
3278559 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.53 47.0 4.09e-01 97.3% 71.2%
3555766 222.1.1.4 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.51 40.0 3.27e-01 84.7% 79.5%
3744550 223.2.1.48 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › FNIP_N, Longin_2 0.50 37.0 3.31e-01 77.5% 97.6%
4889523 222.1.1.1 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydratas 0.50 39.0 3.51e-01 82.9% 65.2%
D2 medium residues 49-117
PDB
Domain cluster: representative
CATH (77)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fblB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.80 62.0 4.74e-01 100.0% 38.5%
2g30A02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.77 54.0 4.52e-01 73.9% 81.9%
3qlbA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.76 54.0 3.19e-01 75.4% 18.0%
1pzdA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.76 54.0 4.49e-01 73.9% 86.1%
7wa9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.76 53.0 4.10e-01 75.4% 35.5%
1lurA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.75 55.0 3.50e-01 76.8% 96.6%
1jmxA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.74 46.0 3.98e-01 75.4% 40.4%
4bboA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.73 52.0 4.37e-01 76.8% 45.1%
3jtyB01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.72 52.0 3.23e-01 76.8% 15.6%
5dl7A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.72 52.0 3.19e-01 76.8% 14.4%
2dslA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.71 50.0 4.18e-01 73.9% 83.5%
5zc1D00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 54.0 4.83e-01 89.9% 58.2%
3e1eC00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.70 52.0 4.02e-01 78.3% 72.3%
3bdrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.69 49.0 3.75e-01 78.3% 32.7%
5is8A02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.69 48.0 3.48e-01 73.9% 52.3%
2ichA01 2.40.370.10 Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain 0.69 60.0 4.48e-01 100.0% 89.4%
1zo0A00 3.40.630.60 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › 0.67 47.0 3.84e-01 72.5% 39.7%
4ge1C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.67 58.0 4.17e-01 94.2% 74.6%
3w7tA01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.67 49.0 3.34e-01 76.8% 85.3%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.67 59.0 4.60e-01 100.0% 81.2%
3djwA00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.67 48.0 4.35e-01 79.7% 55.8%
2h36X00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 47.0 4.09e-01 78.3% 48.1%
3f1tB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.66 46.0 3.66e-01 72.5% 74.3%
4n3tA00 2.60.40.200 Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain 0.66 58.0 4.50e-01 100.0% 93.5%
2qwzA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.65 49.0 3.89e-01 79.7% 75.2%
3fcyA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.65 48.0 3.16e-01 81.2% 27.1%
1ms9A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.65 56.0 3.55e-01 98.6% 68.0%
2qkdA03 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.64 44.0 4.90e-01 71.0% 100.0%
3r87A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.64 51.0 4.25e-01 91.3% 100.0%
1l7aA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.64 47.0 3.11e-01 81.2% 27.0%
6qp7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 53.0 3.23e-01 94.2% 30.8%
6p2kB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 55.0 3.44e-01 95.7% 20.4%
2cy9B00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.64 48.0 3.81e-01 79.7% 72.7%
1ni9A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.63 44.0 3.46e-01 73.9% 57.6%
1zkiA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.63 47.0 3.78e-01 78.3% 78.4%
3qooA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.63 46.0 3.72e-01 78.3% 83.6%
2vckA00 3.40.1500.20 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › 0.63 51.0 3.64e-01 89.9% 88.9%
3ci0I00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.63 46.0 4.33e-01 78.3% 65.1%
4ge6A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.62 43.0 2.85e-01 72.5% 23.4%
1a5yA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.62 42.0 2.79e-01 71.0% 24.6%
4k00A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.62 51.0 4.19e-01 95.7% 100.0%
4w78F00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.61 46.0 3.84e-01 82.6% 97.6%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 53.0 4.23e-01 97.1% 73.9%
3mnmA00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.61 49.0 4.24e-01 89.9% 98.2%
2gvhB02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.61 48.0 4.05e-01 87.0% 92.3%
2egjA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.61 46.0 3.85e-01 84.1% 100.0%
3dkzA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.60 44.0 3.70e-01 79.7% 82.4%
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.60 45.0 4.40e-01 82.6% 81.0%
5c0pA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 51.0 3.43e-01 98.6% 70.4%
1kv3A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 45.0 3.85e-01 82.6% 96.6%
4bs9A05 3.30.160.660 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.60 50.0 4.36e-01 100.0% 69.3%
7vd7A01 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.59 48.0 4.43e-01 92.8% 68.5%
1yguA02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.59 40.0 2.74e-01 73.9% 17.8%
3lbeB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 46.0 3.87e-01 87.0% 85.5%
2kt4B01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 50.0 4.09e-01 100.0% 78.9%
3ir3A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 46.0 3.83e-01 87.0% 96.0%
1ah5A03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.59 44.0 4.17e-01 82.6% 70.9%
1mveA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 50.0 3.51e-01 100.0% 43.8%
4ae8D00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 43.0 3.33e-01 79.7% 63.0%
1qwdB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 50.0 3.83e-01 97.1% 65.1%
1q4tA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.58 43.0 3.46e-01 81.2% 75.4%
4ae7A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.58 42.0 3.19e-01 79.7% 56.5%
2k4vA00 3.30.160.370 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 0.57 45.0 3.82e-01 89.9% 76.8%
3hm0A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 44.0 3.65e-01 84.1% 100.0%
4qunA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.57 39.0 2.63e-01 75.4% 17.3%
5byuA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 50.0 4.12e-01 100.0% 100.0%
2fujA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 40.0 3.48e-01 76.8% 94.1%
6x1kA01 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.56 47.0 4.12e-01 100.0% 98.3%
2hljA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 46.0 3.74e-01 92.8% 97.8%
2o62A02 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 47.0 3.87e-01 97.1% 92.7%
4fzlA02 3.30.450.400 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Colicin M, catalytic domain 0.55 41.0 3.27e-01 81.2% 55.3%
3d6xB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 40.0 3.27e-01 79.7% 77.9%
4dy0B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.54 41.0 3.33e-01 81.2% 70.3%
4i0kA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 37.0 3.44e-01 75.4% 58.9%
2bzlA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.53 37.0 2.50e-01 73.9% 18.0%
2wllA02 2.60.40.1400 Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 0.52 43.0 3.45e-01 95.7% 96.6%
6dnzA02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.50 40.0 3.09e-01 92.8% 60.1%
ECOD (83)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3959649 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.80 55.0 3.96e-01 75.4% 26.3%
5037697 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.80 59.0 4.02e-01 78.3% 72.6%
3270919 331.9.1.2 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C 0.79 56.0 4.67e-01 73.9% 84.3%
3931614 331.9.1.2 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C 0.78 56.0 4.62e-01 73.9% 83.5%
4026594 331.9.1.2 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C 0.78 55.0 4.56e-01 73.9% 82.2%
4026208 331.9.1.2 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C 0.78 55.0 4.59e-01 73.9% 83.5%
3711360 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.76 56.0 3.64e-01 76.8% 20.4%
3987311 7579.1.1.27 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › AXE1 0.76 55.0 3.53e-01 76.8% 27.9%
3292017 331.9.1.4 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Coatomer_g_Cpla 0.76 54.0 4.49e-01 73.9% 87.8%
3252530 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.76 53.0 3.37e-01 72.5% 18.8%
4176400 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.75 50.0 4.87e-01 75.4% 62.7%
3616309 5.1.5.236 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_WDR3_1st 0.75 54.0 3.31e-01 75.4% 13.6%
3782242 331.9.1.4 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Coatomer_g_Cpla 0.75 53.0 4.50e-01 73.9% 89.1%
4028798 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.74 53.0 3.98e-01 75.4% 46.1%
2549178 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.73 53.0 4.46e-01 76.8% 47.8%
3602029 868.1.1.0 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.73 65.0 4.64e-01 100.0% 34.9%
5049477 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.72 49.0 5.26e-01 73.9% 81.7%
5009702 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.72 51.0 4.06e-01 75.4% 46.4%
4014830 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.72 49.0 5.41e-01 72.5% 98.2%
3734383 5.1.11.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.71 60.0 3.74e-01 94.2% 45.1%
3916012 192.29.1.276 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › FmiP_Thoc5 0.70 51.0 3.74e-01 76.8% 33.5%
4024178 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.70 59.0 3.68e-01 94.2% 27.3%
3760326 3291.1.1.50 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › FmiP_Thoc5 0.70 52.0 3.84e-01 78.3% 32.0%
3890539 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.70 55.0 5.83e-01 91.3% 100.0%
3388794 71.2.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like 0.70 59.0 4.04e-01 94.2% 27.1%
3553953 3922.1.1.259 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › FmiP_Thoc5 0.70 51.0 3.83e-01 78.3% 32.6%
3847769 3755.3.1.306 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › FmiP_Thoc5 0.70 51.0 3.85e-01 78.3% 33.5%
3232806 216.1.1.26 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › FmiP_Thoc5 0.70 50.0 3.92e-01 76.8% 39.3%
5014272 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.69 56.0 5.64e-01 88.4% 90.0%
3593405 897.1.1.0 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 0.69 55.0 4.18e-01 89.9% 35.9%
3541901 3698.1.1.2 ↗ beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT_C 0.69 49.0 3.42e-01 73.9% 48.4%
3762480 11.1.5.83 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › BTBD16_C 0.69 57.0 4.60e-01 89.9% 83.1%
3462000 5.3.1.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.69 50.0 3.84e-01 75.4% 92.7%
3266046 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.68 50.0 5.32e-01 78.3% 96.7%
3508100 241.15.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.68 53.0 4.17e-01 82.6% 42.1%
3368252 5.1.4.164 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 0.68 62.0 3.81e-01 100.0% 58.6%
2639349 2004.1.1.480 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 0.68 46.0 3.83e-01 71.0% 87.8%
3451905 5015.1.1.0 ↗ extended segments › PetM subunit of the cytochrome b6f complex › PetM subunit of the cytochrome b6f complex › PetM subunit of the cytochrome b6f complex 0.68 47.0 5.31e-01 72.5% 100.0%
3205249 222.1.1.4 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.68 49.0 3.84e-01 78.3% 70.7%
3716903 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.67 59.0 3.68e-01 95.7% 19.7%
5009919 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.67 60.0 4.27e-01 100.0% 51.7%
154696 9.1.1.2 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Nitrophorin 0.67 58.0 4.15e-01 94.2% 73.8%
3633770 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.67 58.0 3.50e-01 97.1% 14.8%
3574877 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.67 48.0 3.09e-01 75.4% 17.4%
3437088 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.67 50.0 3.66e-01 81.2% 36.9%
4629131 9.29.1.1 ↗ beta barrels › Lipocalins/Streptavidin › VirK › VirK › VirK 0.66 55.0 4.58e-01 92.8% 52.8%
3582595 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.66 57.0 3.91e-01 95.7% 49.4%
3241917 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.66 56.0 3.67e-01 92.8% 34.3%
4189396 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.66 49.0 3.74e-01 78.3% 73.8%
3247982 11.8.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like 0.66 51.0 3.96e-01 85.5% 72.5%
3642523 222.1.1.4 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.65 46.0 3.68e-01 76.8% 73.8%
5015593 3111.1.1.0 ↗ beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain 0.64 55.0 4.62e-01 95.7% 73.3%
3298838 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.64 46.0 4.06e-01 75.4% 97.0%
4054729 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.64 45.0 4.46e-01 75.4% 72.0%
4611568 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.63 43.0 4.24e-01 71.0% 73.3%
4951451 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.63 45.0 3.60e-01 75.4% 37.9%
3965263 274.1.1.5 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › YadA_anchor 0.62 42.0 4.07e-01 71.0% 61.3%
3401376 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.62 53.0 3.42e-01 97.1% 56.0%
4268461 274.1.1.5 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › YadA_anchor 0.62 42.0 4.01e-01 72.5% 58.8%
3857251 1134.1.2.0 ↗ alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Archaeal C-Ala helical domain 0.62 46.0 3.99e-01 79.7% 100.0%
3297744 5.1.4.45 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_3 0.61 54.0 3.26e-01 100.0% 69.3%
3314422 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.61 41.0 4.16e-01 71.0% 74.3%
3965735 274.1.1.5 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › YadA_anchor 0.61 43.0 4.11e-01 76.8% 62.4%
3919600 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 54.0 3.32e-01 100.0% 84.1%
5075519 230.1.1.5 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.60 44.0 3.38e-01 79.7% 90.9%
4459482 6129.1.1.1 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.60 51.0 3.71e-01 100.0% 74.4%
222972 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.60 46.0 4.26e-01 84.1% 71.9%
3892414 11.1.1.363 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 0.60 45.0 4.00e-01 81.2% 100.0%
5067760 283.1.1.0 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase 0.59 41.0 3.84e-01 73.9% 62.2%
5004059 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.59 46.0 3.64e-01 84.1% 49.0%
4132764 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.59 44.0 4.18e-01 82.6% 71.8%
5023443 330.4.1.0 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 0.58 40.0 4.10e-01 71.0% 80.0%
4975692 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.58 44.0 4.08e-01 82.6% 67.8%
4558929 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.58 43.0 4.20e-01 82.6% 73.8%
4638787 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.57 44.0 4.27e-01 88.4% 78.8%
4460237 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.55 44.0 4.34e-01 89.9% 84.0%
3693314 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.55 48.0 3.07e-01 95.7% 47.8%
4175367 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.55 43.0 4.01e-01 88.4% 73.3%
3416429 2004.1.1.442 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21 0.54 47.0 2.91e-01 98.6% 99.8%
4552605 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.53 41.0 4.02e-01 88.4% 80.8%
4135153 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.53 41.0 4.02e-01 88.4% 81.3%
3964888 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.52 45.0 3.24e-01 98.6% 74.3%
3203375 219.1.1.129 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF7770 0.50 44.0 3.63e-01 100.0% 89.8%