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scnpilot_solids1_trim150_scaffold_46_prodigal-single.1__X__X__00140
Bact-Virscnpilot_solids1_trim150_scaffold_46_prodigal-single.1__X__X__00140
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-126
Domain cluster:
rep: MW825358.1__QVD49171.1__LUCX_101__00101__D6-116
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zoqC00 | 6.20.250.30 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.62 | 27.0 | 3.68e-01 | 78.5% | 79.2% |
| 2og4A01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.56 | 47.0 | 3.69e-01 | 93.5% | 77.2% |
| 3npfA03 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.56 | 39.0 | 3.40e-01 | 71.0% | 86.3% |
| 2govA01 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.56 | 38.0 | 3.26e-01 | 70.1% | 80.9% |
| 5cw3C01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.53 | 42.0 | 3.79e-01 | 86.0% | 96.6% |
| 2qngA01 | 2.60.60.30 | Mainly Beta › Sandwich › Lipoxygenase-1 › sav2460 like domains | 0.52 | 36.0 | 3.15e-01 | 72.0% | 87.9% |
| 6h8oA00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.52 | 38.0 | 4.02e-01 | 78.5% | 94.7% |
| 2n99A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.51 | 34.0 | 3.89e-01 | 76.6% | 94.7% |
| 3zgzD04 | 2.20.28.290 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.50 | 30.0 | 3.72e-01 | 76.6% | 100.0% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3222009 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.53 | 37.0 | 3.91e-01 | 80.4% | 81.1% |
| 3734885 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.52 | 38.0 | 2.79e-01 | 76.6% | 52.6% |
| 3231161 | 5067.1.1.3 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched | 0.52 | 38.0 | 2.29e-01 | 77.6% | 60.9% |
| 3932273 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 30.0 | 3.32e-01 | 86.9% | 71.8% |
| 4346148 | 821.1.1.12 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF29812 | 0.51 | 37.0 | 3.54e-01 | 75.7% | 69.6% |
| 4424212 | 2492.1.1.6 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › A_deamin | 0.50 | 41.0 | 2.85e-01 | 89.7% | 73.2% |
| 3942656 | 2.1.1.45 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › gp32 | 0.50 | 41.0 | 3.33e-01 | 88.8% | 88.3% |