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scnpilot_solids2_trim150_scaffold_133_prodigal-single.1__X__X__00159
Bact-Virscnpilot_solids2_trim150_scaffold_133_prodigal-single.1__X__X__00159
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-137
Domain cluster:
rep: NC_048757.1__YP_009844891.1__HWC13_gp082__00082__D259-407
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18925.6 best | DUF5675 | 102.7 | 1.70e-29 | 91.9% | 99.1% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lwjA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 24.0 | 3.84e-01 | 85.3% | 100.0% |
| 5cfvA01 | 3.30.700.10 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin | 0.55 | 27.0 | 2.99e-01 | 88.2% | 57.0% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 34.0 | 3.42e-01 | 98.5% | 64.4% |
| 3d89A00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.52 | 37.0 | 3.80e-01 | 81.6% | 75.7% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1980 | 12.1.1.11 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › MGTA_C | 0.59 | 24.0 | 3.82e-01 | 85.3% | 100.0% |
| 3523669 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.53 | 32.0 | 3.79e-01 | 99.3% | 88.9% |
| 3884574 | 66.1.1.3 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Sol_Rieske_ferrdox | 0.51 | 38.0 | 3.76e-01 | 78.7% | 77.9% |
| 3492201 | 295.1.1.1 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 | 0.51 | 26.0 | 3.40e-01 | 77.2% | 89.3% |
| 3640328 | 4.1.1.411 ↗ | beta barrels › SH3 › SH3 › SH3 › Pkinase_fungal | 0.50 | 24.0 | 3.15e-01 | 96.3% | 84.3% |