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scnpilot_solids2_trim150_scaffold_133_prodigal-single.1__X__X__00168
Bact-Virscnpilot_solids2_trim150_scaffold_133_prodigal-single.1__X__X__00168
Identity
- Kingdom:
- phage
Quality
79.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 43-91
Domain cluster:
rep: GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00664__D1-57
CATH (79)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xtlA02 | 2.60.40.1140 | Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain | 0.75 | 67.0 | 5.24e-01 | 100.0% | 48.5% |
| 3egrA00 | 3.10.20.520 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B | 0.70 | 57.0 | 5.39e-01 | 95.9% | 82.5% |
| 1t3yA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.70 | 54.0 | 4.03e-01 | 98.0% | 32.8% |
| 1es6A02 | 2.60.510.10 | Mainly Beta › Sandwich › EV matrix protein fold › EV matrix protein | 0.69 | 58.0 | 4.67e-01 | 95.9% | 100.0% |
| 3o4lD01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 61.0 | 4.75e-01 | 100.0% | 65.4% |
| 3e8vA00 | 2.60.40.1120 | Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain | 0.69 | 55.0 | 4.69e-01 | 100.0% | 53.7% |
| 8shiI01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 59.0 | 4.63e-01 | 98.0% | 62.5% |
| 2cyyA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.68 | 59.0 | 4.81e-01 | 100.0% | 85.3% |
| 5fmvA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 54.0 | 4.61e-01 | 100.0% | 53.6% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.67 | 55.0 | 3.97e-01 | 100.0% | 49.1% |
| 3gzaB02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.67 | 54.0 | 4.40e-01 | 98.0% | 45.9% |
| 2pw9C03 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.67 | 54.0 | 4.06e-01 | 95.9% | 36.2% |
| 2yjlA00 | 2.60.40.2990 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 57.0 | 4.50e-01 | 100.0% | 48.1% |
| 2w91A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 59.0 | 4.60e-01 | 100.0% | 48.5% |
| 2cdoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.66 | 58.0 | 4.23e-01 | 100.0% | 39.9% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.66 | 54.0 | 5.02e-01 | 98.0% | 77.3% |
| 2wnvD00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 56.0 | 4.13e-01 | 100.0% | 41.4% |
| 4llgM00 | 3.10.20.510 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor | 0.65 | 51.0 | 5.11e-01 | 93.9% | 94.0% |
| 2dvkA00 | 3.30.1960.10 | Alpha Beta › 2-Layer Sandwich › SSo0622-like fold › tRNA wybutosine-synthesizing-like | 0.65 | 53.0 | 3.77e-01 | 100.0% | 28.9% |
| 3qjhA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 55.0 | 4.31e-01 | 98.0% | 61.7% |
| 5j3uA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 53.0 | 3.98e-01 | 98.0% | 36.3% |
| 1jhjA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 55.0 | 3.86e-01 | 98.0% | 32.9% |
| 3dn7A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 54.0 | 3.90e-01 | 98.0% | 32.4% |
| 4bfiB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 55.0 | 4.27e-01 | 100.0% | 60.7% |
| 4lhsA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 54.0 | 3.93e-01 | 100.0% | 37.6% |
| 2g9gA00 | 2.60.120.1020 | Mainly Beta › Sandwich › Jelly Rolls › PAW domain | 0.64 | 47.0 | 3.23e-01 | 100.0% | 21.2% |
| 5d2lE01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 55.0 | 4.34e-01 | 100.0% | 61.1% |
| 3u83A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 54.0 | 4.30e-01 | 100.0% | 62.4% |
| 4mz2A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 54.0 | 4.23e-01 | 100.0% | 64.0% |
| 2pndA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 54.0 | 4.16e-01 | 100.0% | 57.1% |
| 3f8uB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 53.0 | 4.03e-01 | 100.0% | 60.3% |
| 2huhA01 | 2.60.40.1600 | Mainly Beta › Sandwich › Immunoglobulin-like › Smr-associated-like | 0.63 | 51.0 | 3.87e-01 | 98.0% | 36.8% |
| 1u8sA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 50.0 | 4.43e-01 | 100.0% | 98.8% |
| 4zchA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 53.0 | 4.01e-01 | 100.0% | 42.3% |
| 3au4A02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.63 | 52.0 | 4.35e-01 | 98.0% | 70.2% |
| 2qyxA02 | 3.30.70.1360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › mj0159-like | 0.62 | 51.0 | 4.09e-01 | 100.0% | 44.2% |
| 2drvA00 | 3.30.1960.10 | Alpha Beta › 2-Layer Sandwich › SSo0622-like fold › tRNA wybutosine-synthesizing-like | 0.62 | 53.0 | 3.55e-01 | 95.9% | 68.6% |
| 2f91A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.62 | 52.0 | 4.06e-01 | 98.0% | 46.9% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.62 | 49.0 | 4.19e-01 | 100.0% | 56.4% |
| 1darA05 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 48.0 | 4.21e-01 | 98.0% | 81.6% |
| 2h5eA03 | 3.30.70.3280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptide chain release factor 3, domain III | 0.61 | 49.0 | 3.72e-01 | 98.0% | 51.8% |
| 8bvoA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 46.0 | 4.05e-01 | 100.0% | 53.5% |
| 2cs4A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.60 | 45.0 | 3.84e-01 | 98.0% | 46.3% |
| 2j58A03 | 3.30.1950.10 | Alpha Beta › 2-Layer Sandwich › wza like fold › wza like domain | 0.60 | 49.0 | 4.30e-01 | 98.0% | 96.3% |
| 2v72A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 50.0 | 3.68e-01 | 95.9% | 34.3% |
| 6k2eA01 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 47.0 | 4.41e-01 | 98.0% | 97.1% |
| 6fzvD01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.60 | 47.0 | 3.59e-01 | 100.0% | 36.4% |
| 3pvlA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.60 | 49.0 | 4.08e-01 | 100.0% | 52.1% |
| 3am2A02 | 2.60.120.1050 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 48.0 | 3.73e-01 | 98.0% | 39.3% |
| 1o5lA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 50.0 | 3.69e-01 | 98.0% | 36.4% |
| 5xbfA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 48.0 | 4.14e-01 | 100.0% | 55.2% |
| 2llzA01 | 3.30.70.2360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 45.0 | 3.92e-01 | 93.9% | 91.1% |
| 2wadA02 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.58 | 44.0 | 3.30e-01 | 95.9% | 29.7% |
| 1z1dB00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.58 | 51.0 | 3.75e-01 | 100.0% | 45.0% |
| 6vgwA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.58 | 46.0 | 3.43e-01 | 93.9% | 68.1% |
| 2rilA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 46.0 | 3.92e-01 | 98.0% | 93.7% |
| 7a6pB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 51.0 | 3.64e-01 | 98.0% | 74.6% |
| 8afoA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 45.0 | 3.91e-01 | 100.0% | 53.4% |
| 1pgl100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 49.0 | 3.40e-01 | 100.0% | 34.6% |
| 1wscA01 | 3.30.700.20 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Hypothetical protein ph0010; domain 1 | 0.57 | 45.0 | 3.41e-01 | 98.0% | 43.6% |
| 4osnA00 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.56 | 46.0 | 3.61e-01 | 93.9% | 90.0% |
| 2v5yA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 44.0 | 3.71e-01 | 100.0% | 49.0% |
| 2pjyC00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.55 | 44.0 | 3.99e-01 | 100.0% | 91.1% |
| 3zq5A03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.55 | 41.0 | 2.99e-01 | 83.7% | 29.4% |
| 1ywhC03 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.55 | 44.0 | 3.86e-01 | 100.0% | 90.9% |
| 2a90A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.55 | 44.0 | 3.74e-01 | 100.0% | 76.5% |
| 3eeaA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.55 | 39.0 | 2.90e-01 | 81.6% | 45.1% |
| 2y26A02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 46.0 | 3.26e-01 | 100.0% | 37.0% |
| 3zn6A01 | 2.60.120.1170 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 45.0 | 3.41e-01 | 100.0% | 43.3% |
| 1yi9A02 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 45.0 | 3.38e-01 | 100.0% | 36.5% |
| 4bwsF00 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.54 | 42.0 | 3.95e-01 | 100.0% | 71.6% |
| 1wapA00 | 2.60.40.50 | Mainly Beta › Sandwich › Immunoglobulin-like › TRAP-like | 0.53 | 42.0 | 3.94e-01 | 100.0% | 86.8% |
| 4mxwD00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 42.0 | 3.24e-01 | 95.9% | 41.5% |
| 4dxaB01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 42.0 | 3.54e-01 | 100.0% | 56.7% |
| 2ea9A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 35.0 | 2.97e-01 | 71.4% | 48.9% |
| 3b2dC00 | 2.60.40.770 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 41.0 | 3.19e-01 | 100.0% | 48.9% |
| 4dmiA02 | 2.60.120.1010 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 40.0 | 3.12e-01 | 98.0% | 44.5% |
| 3hrzC01 | 2.20.210.20 | Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › | 0.51 | 40.0 | 4.02e-01 | 98.0% | 95.9% |
| 2h6cA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 40.0 | 3.16e-01 | 100.0% | 47.3% |
ECOD (74)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5061002 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.76 | 63.0 | 5.03e-01 | 100.0% | 47.4% |
| 3603749 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.75 | 66.0 | 5.57e-01 | 98.0% | 92.5% |
| 4408833 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.75 | 62.0 | 4.86e-01 | 100.0% | 43.7% |
| 3510118 | 4076.1.1.0 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like | 0.75 | 62.0 | 5.95e-01 | 98.0% | 80.0% |
| 1168385 | 11.1.4.31 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › GramPos_pilinD3 | 0.75 | 67.0 | 5.03e-01 | 100.0% | 42.5% |
| 5015637 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.75 | 64.0 | 5.50e-01 | 98.0% | 95.0% |
| 4373827 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.72 | 61.0 | 5.08e-01 | 98.0% | 86.4% |
| 3533173 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.71 | 54.0 | 4.61e-01 | 98.0% | 51.2% |
| 3705856 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.71 | 60.0 | 3.73e-01 | 100.0% | 45.0% |
| 5010216 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.71 | 59.0 | 5.36e-01 | 98.0% | 95.7% |
| 5011764 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.70 | 59.0 | 5.10e-01 | 98.0% | 85.0% |
| 5014007 | 3115.2.1.0 ↗ | a+b two layers › GP2-like › GP2 › GP2 | 0.69 | 56.0 | 5.49e-01 | 98.0% | 89.1% |
| 3572890 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.69 | 61.0 | 4.32e-01 | 100.0% | 36.0% |
| 4202051 | 10.32.1.271 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF27237 | 0.69 | 59.0 | 4.81e-01 | 100.0% | 52.2% |
| 5005599 | 10.1.2.201 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PF27237 | 0.69 | 59.0 | 4.81e-01 | 100.0% | 52.2% |
| 4654177 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.69 | 58.0 | 3.75e-01 | 100.0% | 21.6% |
| 3780458 | 223.2.1.51 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Njmu-R1 | 0.68 | 48.0 | 3.52e-01 | 77.6% | 39.2% |
| 3907242 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.67 | 57.0 | 3.69e-01 | 100.0% | 22.9% |
| 4492672 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 54.0 | 4.12e-01 | 100.0% | 37.5% |
| 4440530 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.67 | 55.0 | 3.97e-01 | 100.0% | 31.7% |
| 4012870 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.67 | 55.0 | 5.03e-01 | 98.0% | 100.0% |
| 3932770 | 11.1.4.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › TTR-52 | 0.66 | 56.0 | 4.42e-01 | 100.0% | 45.5% |
| 3820477 | 11.1.1.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › E1_DerP2_DerF2 | 0.66 | 57.0 | 4.17e-01 | 100.0% | 47.9% |
| 3620456 | 221.1.1.64 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Formin_GBD_N | 0.66 | 57.0 | 4.47e-01 | 100.0% | 45.5% |
| 5070734 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.66 | 58.0 | 4.51e-01 | 100.0% | 53.6% |
| 4981974 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 57.0 | 4.24e-01 | 100.0% | 46.2% |
| 5052821 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 56.0 | 4.47e-01 | 100.0% | 48.6% |
| 5022446 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.66 | 54.0 | 5.03e-01 | 95.9% | 98.5% |
| 3769452 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 57.0 | 4.36e-01 | 100.0% | 42.6% |
| 3574796 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 53.0 | 3.98e-01 | 100.0% | 35.4% |
| 4524847 | 329.1.1.1 ↗ | a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › GAD | 0.65 | 47.0 | 3.59e-01 | 81.6% | 79.2% |
| 3574016 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.65 | 53.0 | 4.84e-01 | 100.0% | 100.0% |
| 4180988 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.65 | 54.0 | 3.49e-01 | 98.0% | 20.9% |
| 2324048 | 1185.1.1.1 ↗ | a+b two layers › A hypothetical protein from Neisseria gonorrhoeae › A hypothetical protein from Neisseria gonorrhoeae › A hypothetical protein from Neisseria gonorrhoeae › DUF6911 | 0.65 | 53.0 | 3.99e-01 | 100.0% | 37.0% |
| 3910189 | 11.1.1.597 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ELFN_Fn3 | 0.64 | 53.0 | 3.99e-01 | 98.0% | 36.2% |
| 5080205 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.64 | 52.0 | 5.20e-01 | 98.0% | 98.0% |
| 4646775 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.64 | 52.0 | 4.68e-01 | 100.0% | 96.0% |
| 5069287 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.64 | 55.0 | 4.29e-01 | 100.0% | 52.7% |
| 5048876 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.64 | 48.0 | 4.51e-01 | 100.0% | 67.7% |
| 3514167 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 54.0 | 4.00e-01 | 100.0% | 40.7% |
| 4048590 | 10.32.1.53 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GalBD_like | 0.64 | 54.0 | 3.75e-01 | 100.0% | 28.6% |
| 5008176 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.64 | 53.0 | 3.71e-01 | 100.0% | 32.6% |
| 5005349 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 52.0 | 3.06e-01 | 100.0% | 10.3% |
| 3941066 | 11.1.4.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › TTR-52 | 0.63 | 55.0 | 4.27e-01 | 100.0% | 44.5% |
| 3479367 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.63 | 50.0 | 4.66e-01 | 98.0% | 71.9% |
| 3933905 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.62 | 51.0 | 3.85e-01 | 100.0% | 38.6% |
| 5039612 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.62 | 53.0 | 4.10e-01 | 100.0% | 44.1% |
| 3243597 | 10.32.1.277 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF870 | 0.61 | 51.0 | 4.40e-01 | 100.0% | 63.5% |
| 5014311 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.61 | 51.0 | 3.33e-01 | 100.0% | 27.3% |
| 3569682 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.61 | 52.0 | 4.05e-01 | 100.0% | 44.3% |
| 3326623 | 221.1.1.166 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PF26130 | 0.60 | 49.0 | 4.45e-01 | 100.0% | 67.1% |
| 3985028 | 213.1.1.103 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Mom | 0.60 | 48.0 | 3.22e-01 | 89.8% | 32.1% |
| 5068866 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.60 | 51.0 | 4.02e-01 | 100.0% | 50.9% |
| 4014216 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.60 | 47.0 | 2.91e-01 | 100.0% | 13.3% |
| 2874793 | 6016.1.1.1 ↗ | a+b two layers › Domain 1 of outer membrane lipoprotein Wza › Domain 1 of outer membrane lipoprotein Wza › Domain 1 of outer membrane lipoprotein Wza › Poly_export | 0.60 | 49.0 | 4.24e-01 | 98.0% | 90.7% |
| 3579526 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.60 | 49.0 | 3.59e-01 | 100.0% | 35.5% |
| 3701633 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.60 | 48.0 | 4.12e-01 | 100.0% | 54.1% |
| 4024040 | 822.1.1.0 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain | 0.60 | 47.0 | 4.45e-01 | 100.0% | 72.3% |
| 3878866 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.60 | 50.0 | 3.52e-01 | 100.0% | 29.4% |
| 3232933 | 11.1.1.1234 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF870 | 0.59 | 49.0 | 3.88e-01 | 100.0% | 47.0% |
| 5040308 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.58 | 49.0 | 3.50e-01 | 100.0% | 32.7% |
| 3602817 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.58 | 46.0 | 4.34e-01 | 98.0% | 73.3% |
| 1720475 | 10.2.1.25 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_SCP | 0.58 | 48.0 | 3.31e-01 | 100.0% | 32.1% |
| 5025698 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.57 | 50.0 | 3.95e-01 | 100.0% | 52.4% |
| 5038998 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 50.0 | 3.76e-01 | 100.0% | 43.3% |
| 5052820 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 49.0 | 3.31e-01 | 100.0% | 49.5% |
| 4968901 | 304.22.1.0 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain | 0.56 | 43.0 | 4.07e-01 | 91.8% | 100.0% |
| 4021799 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 46.0 | 3.36e-01 | 100.0% | 50.7% |
| 3218243 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.53 | 43.0 | 3.70e-01 | 95.9% | 81.2% |
| 3743150 | 11.1.1.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › E1_DerP2_DerF2 | 0.53 | 42.0 | 3.20e-01 | 98.0% | 49.3% |
| 3505782 | 7508.1.1.1 ↗ | a/b three-layered sandwiches › O-glucosyltransferase rumi N-terminal domain › O-glucosyltransferase rumi N-terminal domain › O-glucosyltransferase rumi N-terminal domain › Glyco_transf_90 | 0.53 | 37.0 | 2.99e-01 | 75.5% | 37.0% |
| 3922466 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 44.0 | 3.29e-01 | 100.0% | 48.6% |
| 4943853 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 44.0 | 3.20e-01 | 100.0% | 60.0% |
| 3237567 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.50 | 42.0 | 4.07e-01 | 100.0% | 85.5% |
D2
high
residues 165-207
Domain cluster:
representative
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pkaA00 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.70 | 55.0 | 4.54e-01 | 100.0% | 47.5% |
| 2v94B00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.68 | 49.0 | 3.99e-01 | 83.7% | 45.2% |
| 2vecA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.67 | 48.0 | 3.62e-01 | 100.0% | 32.0% |
| 2xvlA02 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 56.0 | 3.90e-01 | 100.0% | 35.4% |
| 1ne6A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 53.0 | 3.78e-01 | 100.0% | 31.1% |
| 5e16A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 53.0 | 3.67e-01 | 100.0% | 27.5% |
| 4myjA04 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 53.0 | 3.69e-01 | 100.0% | 29.5% |
| 3ocpB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 52.0 | 3.67e-01 | 100.0% | 29.7% |
| 6s2wA01 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.64 | 52.0 | 4.38e-01 | 100.0% | 65.9% |
| 4rz7A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 52.0 | 3.69e-01 | 100.0% | 31.4% |
| 1d2oA01 | 2.60.40.1140 | Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain | 0.63 | 54.0 | 4.10e-01 | 100.0% | 42.1% |
| 2dmwA01 | 3.30.450.50 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain | 0.62 | 45.0 | 3.39e-01 | 86.0% | 30.2% |
| 4llgM00 | 3.10.20.510 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor | 0.62 | 50.0 | 4.87e-01 | 100.0% | 84.0% |
| 2vsdA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 53.0 | 4.16e-01 | 100.0% | 46.2% |
| 2pw9C03 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.61 | 49.0 | 3.64e-01 | 100.0% | 31.9% |
| 4gb7A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.61 | 45.0 | 2.70e-01 | 86.0% | 42.5% |
| 3cq9A00 | 3.40.50.10240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain | 0.61 | 46.0 | 3.01e-01 | 83.7% | 29.7% |
| 4esnA00 | 2.60.320.10 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain | 0.60 | 52.0 | 4.31e-01 | 100.0% | 94.9% |
| 4devD01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 50.0 | 3.62e-01 | 100.0% | 33.6% |
| 3cu7A05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.59 | 50.0 | 3.83e-01 | 100.0% | 41.5% |
| 6grqA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 49.0 | 4.02e-01 | 100.0% | 50.0% |
| 1ollA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 48.0 | 3.87e-01 | 100.0% | 47.4% |
| 3skvA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 47.0 | 3.33e-01 | 100.0% | 26.6% |
| 2wngA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 48.0 | 3.91e-01 | 100.0% | 50.6% |
| 1zczA02 | 3.40.140.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › AICAR transformylase, duplication domain | 0.57 | 44.0 | 3.44e-01 | 100.0% | 35.9% |
| 2xbzA00 | 2.60.40.2380 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 47.0 | 3.41e-01 | 100.0% | 31.8% |
| 7pjjA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 40.0 | 3.04e-01 | 100.0% | 27.9% |
| 7o0eA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 41.0 | 3.44e-01 | 100.0% | 43.4% |
| 1z3aA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.56 | 48.0 | 3.30e-01 | 100.0% | 34.0% |
| 2w3jA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 50.0 | 3.47e-01 | 100.0% | 33.6% |
| 3wqbA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 45.0 | 3.14e-01 | 100.0% | 72.3% |
| 5f7uA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 45.0 | 3.49e-01 | 100.0% | 41.4% |
| 1wh2A01 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.55 | 40.0 | 3.78e-01 | 100.0% | 62.3% |
| 2vvfA01 | 2.60.120.730 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 45.0 | 3.24e-01 | 100.0% | 52.5% |
| 1g8mA03 | 3.40.140.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › AICAR transformylase, duplication domain | 0.54 | 43.0 | 3.13e-01 | 100.0% | 42.2% |
| 1zczA03 | 3.40.140.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › AICAR transformylase, duplication domain | 0.53 | 43.0 | 3.23e-01 | 100.0% | 33.9% |
| 2q18X02 | 3.90.850.10 | Alpha Beta › Alpha-Beta Complex › Fumarylacetoacetate hydrolase; domain 2 › Fumarylacetoacetase-like, C-terminal domain | 0.53 | 40.0 | 2.66e-01 | 83.7% | 82.5% |
| 2bv4A00 | 2.60.120.400 | Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin | 0.52 | 44.0 | 3.29e-01 | 100.0% | 36.3% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 45.0 | 3.21e-01 | 100.0% | 38.0% |
| 6se8A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 3.24e-01 | 100.0% | 50.0% |
| 3n0aA02 | 2.60.40.1110 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 44.0 | 3.19e-01 | 100.0% | 35.6% |
| 2okxA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 42.0 | 2.93e-01 | 100.0% | 45.2% |
| 4kc3B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 42.0 | 3.36e-01 | 100.0% | 43.2% |
| 2e56A00 | 2.60.40.770 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 42.0 | 3.04e-01 | 100.0% | 41.7% |
| 4ofkB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 41.0 | 3.30e-01 | 100.0% | 50.0% |
| 1g8mA02 | 3.40.140.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › AICAR transformylase, duplication domain | 0.51 | 38.0 | 2.78e-01 | 100.0% | 38.1% |
| 2pjhA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 40.0 | 3.52e-01 | 100.0% | 89.5% |
| 1yq2A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 39.0 | 3.10e-01 | 100.0% | 46.1% |
| 2yt4A01 | 3.30.160.590 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.50 | 38.0 | 4.19e-01 | 86.0% | 100.0% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4011630 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.77 | 52.0 | 5.55e-01 | 100.0% | 81.6% |
| 3953385 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.74 | 52.0 | 5.37e-01 | 100.0% | 80.0% |
| 4008901 | 3462.1.1.20 ↗ | extended segments › V-type proton ATPase subunit G › V-type proton ATPase subunit G › V-type proton ATPase subunit G › Band_7 | 0.72 | 50.0 | 5.17e-01 | 100.0% | 80.0% |
| 3307087 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.70 | 50.0 | 5.16e-01 | 100.0% | 82.5% |
| 5018703 | 815.1.1.0 ↗ | a+b two layers › Chromosomal protein MC1 › Chromosomal protein MC1 › Chromosomal protein MC1 | 0.70 | 58.0 | 4.68e-01 | 100.0% | 56.7% |
| 3824036 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.70 | 50.0 | 5.14e-01 | 100.0% | 82.5% |
| 3572818 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.70 | 47.0 | 4.90e-01 | 100.0% | 77.5% |
| 4946746 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.64 | 55.0 | 4.14e-01 | 100.0% | 62.7% |
| 4463006 | 3115.2.1.0 ↗ | a+b two layers › GP2-like › GP2 › GP2 | 0.64 | 53.0 | 5.33e-01 | 100.0% | 97.8% |
| 5047307 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.62 | 47.0 | 3.83e-01 | 97.7% | 43.4% |
| 3401104 | 10.12.1.108 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › POPDC1-3 | 0.62 | 53.0 | 3.62e-01 | 100.0% | 26.5% |
| 3585444 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.62 | 49.0 | 3.39e-01 | 100.0% | 26.2% |
| 5031760 | 304.4.1.19 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › SCO4226-like | 0.61 | 48.0 | 4.08e-01 | 100.0% | 95.3% |
| 4516271 | 10.12.1.108 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › POPDC1-3 | 0.60 | 53.0 | 3.46e-01 | 100.0% | 23.2% |
| 3776000 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.60 | 50.0 | 3.99e-01 | 100.0% | 45.3% |
| 3756439 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 49.0 | 3.52e-01 | 100.0% | 30.7% |
| 4955497 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 49.0 | 3.73e-01 | 100.0% | 41.8% |
| 3441110 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.58 | 50.0 | 4.10e-01 | 100.0% | 91.3% |
| 3953036 | 223.3.1.1 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.58 | 43.0 | 2.56e-01 | 86.0% | 80.0% |
| 4969662 | 11.1.1.246 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 | 0.57 | 47.0 | 3.63e-01 | 100.0% | 50.0% |
| 4978609 | 4019.1.1.0 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins | 0.57 | 42.0 | 2.91e-01 | 86.0% | 75.9% |
| 3924084 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.57 | 45.0 | 3.64e-01 | 100.0% | 97.0% |
| 3754873 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.56 | 42.0 | 3.36e-01 | 100.0% | 38.9% |
| 3743609 | 223.6.1.1 ↗ | a+b three layers › Profilin-like › GlcG-like › GlcG-like › HbpS-like | 0.56 | 39.0 | 2.73e-01 | 79.1% | 60.9% |
| 3972444 | 4019.1.1.1 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.55 | 43.0 | 2.56e-01 | 90.7% | 78.9% |
| 5051709 | 4019.1.1.1 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.54 | 44.0 | 2.68e-01 | 97.7% | 62.7% |
| 3935475 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 43.0 | 2.77e-01 | 100.0% | 19.2% |
| 3784800 | 10.32.1.240 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PNGaseA | 0.54 | 45.0 | 3.07e-01 | 100.0% | 69.1% |
| 5017957 | 4019.1.1.1 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.53 | 40.0 | 2.43e-01 | 86.0% | 84.2% |
| 3907901 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.53 | 45.0 | 3.48e-01 | 100.0% | 46.7% |
| 3671153 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.53 | 38.0 | 3.15e-01 | 81.4% | 51.1% |
| 4129719 | 10.32.1.215 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29167 | 0.53 | 44.0 | 3.02e-01 | 100.0% | 61.1% |
| 3258529 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.53 | 44.0 | 3.45e-01 | 100.0% | 45.0% |
| 2995198 | 10.2.1.54 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_N | 0.52 | 38.0 | 2.53e-01 | 79.1% | 58.4% |
| 3222106 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 37.0 | 2.88e-01 | 88.4% | 30.0% |
| 3920661 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.52 | 44.0 | 3.42e-01 | 100.0% | 45.7% |
| 3324666 | 10.32.1.212 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GUB_WAK_bind | 0.52 | 44.0 | 2.80e-01 | 100.0% | 23.4% |
| 3627211 | 11.2.1.8 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PTEN_C2 | 0.52 | 40.0 | 2.77e-01 | 100.0% | 76.2% |
| 4870234 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 44.0 | 3.40e-01 | 100.0% | 57.4% |
| 3976564 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.50 | 39.0 | 2.86e-01 | 100.0% | 30.0% |
| 3213885 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.50 | 43.0 | 3.33e-01 | 100.0% | 55.2% |
D3
medium
residues 106-161
Domain cluster:
representative
CATH (63)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kr9A02 | 1.10.287.1890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.91 | 70.0 | 6.80e-01 | 80.4% | 75.4% |
| 3tklB01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.91 | 86.0 | 8.25e-01 | 100.0% | 91.9% |
| 3u0cA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.90 | 84.0 | 5.94e-01 | 100.0% | 37.7% |
| 2dw4A03 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.89 | 84.0 | 6.69e-01 | 100.0% | 77.2% |
| 4aifA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.89 | 80.0 | 5.73e-01 | 100.0% | 37.5% |
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.88 | 69.0 | 7.39e-01 | 100.0% | 95.9% |
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.88 | 71.0 | 6.46e-01 | 92.9% | 67.6% |
| 1sg2A00 | 3.30.910.20 | Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain | 0.87 | 79.0 | 5.78e-01 | 100.0% | 39.7% |
| 2ch7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.87 | 79.0 | 4.81e-01 | 100.0% | 19.4% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.87 | 80.0 | 7.64e-01 | 100.0% | 89.1% |
| 3rkvA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.86 | 76.0 | 5.51e-01 | 98.2% | 36.7% |
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.86 | 80.0 | 6.80e-01 | 100.0% | 66.3% |
| 1rq0A01 | 6.10.140.160 | Special › Helix non-globular › Helix Hairpins › | 0.86 | 80.0 | 6.90e-01 | 100.0% | 69.9% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.86 | 79.0 | 7.82e-01 | 100.0% | 94.8% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.85 | 76.0 | 7.58e-01 | 98.2% | 96.6% |
| 4mh6A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.84 | 76.0 | 5.39e-01 | 100.0% | 92.5% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.84 | 76.0 | 6.71e-01 | 100.0% | 75.3% |
| 4a4kA01 | 1.20.1500.20 | Mainly Alpha › Up-down Bundle › YheA-like fold › | 0.84 | 77.0 | 5.97e-01 | 98.2% | 53.1% |
| 3pt1A02 | 1.20.930.60 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.84 | 73.0 | 5.65e-01 | 96.4% | 46.7% |
| 3qf7A02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.83 | 78.0 | 7.44e-01 | 100.0% | 93.7% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.83 | 74.0 | 6.67e-01 | 98.2% | 73.0% |
| 3fnbA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.83 | 70.0 | 5.45e-01 | 91.1% | 44.7% |
| 1wpaA01 | 6.10.140.340 | Special › Helix non-globular › Helix Hairpins › | 0.83 | 76.0 | 6.19e-01 | 100.0% | 58.6% |
| 3hiuD00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.83 | 75.0 | 5.40e-01 | 100.0% | 37.5% |
| 3zgxA02 | 6.10.140.1720 | Special › Helix non-globular › Helix Hairpins › | 0.83 | 74.0 | 6.28e-01 | 100.0% | 65.9% |
| 2p4vA01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.83 | 75.0 | 6.73e-01 | 100.0% | 84.2% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.83 | 75.0 | 6.61e-01 | 98.2% | 79.5% |
| 1t7sA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.82 | 73.0 | 5.55e-01 | 100.0% | 44.2% |
| 1ykhA00 | 6.10.140.200 | Special › Helix non-globular › Helix Hairpins › | 0.82 | 74.0 | 6.11e-01 | 98.2% | 60.0% |
| 7t7kA01 | 1.20.930.60 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.81 | 72.0 | 5.58e-01 | 98.2% | 73.7% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.81 | 71.0 | 6.70e-01 | 98.2% | 98.5% |
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.81 | 72.0 | 5.95e-01 | 100.0% | 61.2% |
| 1k90B03 | 1.20.140.60 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.81 | 73.0 | 5.68e-01 | 100.0% | 48.7% |
| 4gouA03 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.81 | 72.0 | 4.86e-01 | 98.2% | 73.1% |
| 3uumA00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 72.0 | 5.54e-01 | 100.0% | 46.7% |
| 3lnnB03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.80 | 71.0 | 6.74e-01 | 100.0% | 100.0% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.80 | 73.0 | 7.12e-01 | 100.0% | 93.4% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.79 | 70.0 | 5.54e-01 | 98.2% | 68.2% |
| 4hwdD00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.78 | 64.0 | 5.46e-01 | 100.0% | 56.7% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 61.0 | 5.66e-01 | 87.5% | 69.9% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.78 | 66.0 | 5.92e-01 | 96.4% | 100.0% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.77 | 66.0 | 5.14e-01 | 100.0% | 44.9% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.77 | 68.0 | 5.33e-01 | 98.2% | 76.9% |
| 3h1nA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.77 | 68.0 | 5.30e-01 | 100.0% | 56.7% |
| 2yevA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.75 | 66.0 | 5.98e-01 | 96.4% | 77.0% |
| 3gnlB02 | 1.10.287.1890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.73 | 58.0 | 5.54e-01 | 94.6% | 76.5% |
| 3kdrA01 | 1.20.1270.210 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.72 | 60.0 | 4.91e-01 | 94.6% | 70.8% |
| 4l8jA04 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.72 | 62.0 | 6.13e-01 | 98.2% | 100.0% |
| 5nohA00 | 1.20.120.1350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain | 0.71 | 54.0 | 4.35e-01 | 80.4% | 43.7% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.71 | 61.0 | 6.02e-01 | 100.0% | 100.0% |
| 2kkmA01 | 1.20.1440.170 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Translation machinery-associated protein 16-like | 0.71 | 57.0 | 4.38e-01 | 87.5% | 90.4% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 57.0 | 5.49e-01 | 94.6% | 76.9% |
| 2l35A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.70 | 60.0 | 5.88e-01 | 100.0% | 96.8% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 59.0 | 5.38e-01 | 96.4% | 73.7% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.70 | 57.0 | 4.43e-01 | 100.0% | 51.0% |
| 1ij5A01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 59.0 | 5.41e-01 | 100.0% | 75.0% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 58.0 | 5.13e-01 | 100.0% | 98.9% |
| 3cqcB01 | 1.20.58.1380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 54.0 | 4.73e-01 | 91.1% | 55.6% |
| 2m6uA00 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.69 | 57.0 | 5.08e-01 | 92.9% | 67.1% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.68 | 56.0 | 5.02e-01 | 100.0% | 67.4% |
| 1zbtA01 | 6.10.140.1950 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 57.0 | 5.11e-01 | 100.0% | 67.5% |
| 4dyqA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.66 | 53.0 | 4.54e-01 | 96.4% | 53.4% |
| 3cegA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.56 | 46.0 | 3.02e-01 | 100.0% | 19.5% |
ECOD (80)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4939089 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.95 | 87.0 | 5.28e-01 | 96.4% | 20.1% |
| 3397137 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.94 | 85.0 | 7.57e-01 | 96.4% | 72.0% |
| 4202466 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.94 | 72.0 | 8.02e-01 | 80.4% | 100.0% |
| 4196271 | 4246.1.1.2 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 | 0.94 | 89.0 | 5.18e-01 | 100.0% | 14.8% |
| 5009681 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.93 | 88.0 | 6.31e-01 | 100.0% | 40.7% |
| 4667859 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.93 | 87.0 | 6.67e-01 | 100.0% | 49.6% |
| 3192393 | 2004.1.1.430 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, ABC_tran_Xtn | 0.93 | 86.0 | 4.80e-01 | 100.0% | 9.3% |
| 3219691 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.93 | 76.0 | 7.00e-01 | 87.5% | 70.0% |
| 3348106 | 5076.2.1.10 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › PF29520 | 0.92 | 86.0 | 5.34e-01 | 100.0% | 22.2% |
| 3852268 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.92 | 86.0 | 5.96e-01 | 100.0% | 62.6% |
| 3642421 | 603.1.1.5 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N | 0.92 | 85.0 | 6.36e-01 | 100.0% | 48.0% |
| 3817615 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.91 | 85.0 | 6.72e-01 | 100.0% | 54.3% |
| 3253283 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.91 | 86.0 | 6.99e-01 | 100.0% | 63.2% |
| 3795985 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.91 | 81.0 | 6.90e-01 | 94.6% | 63.5% |
| 3594586 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.91 | 86.0 | 6.97e-01 | 100.0% | 60.0% |
| 3491738 | 632.8.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 | 0.91 | 85.0 | 6.86e-01 | 100.0% | 60.6% |
| 3755476 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.91 | 85.0 | 5.76e-01 | 100.0% | 32.6% |
| 3796589 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.91 | 79.0 | 6.35e-01 | 92.9% | 53.0% |
| 3719591 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.91 | 85.0 | 5.51e-01 | 100.0% | 26.5% |
| 3872955 | 109.4.1.2380 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_8, TPR_10, TPR_12, TPR_MalT | 0.91 | 85.0 | 4.81e-01 | 100.0% | 11.6% |
| 4108773 | 142.1.1.1 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 | 0.91 | 84.0 | 5.05e-01 | 100.0% | 17.2% |
| 3681637 | 603.1.1.5 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N | 0.91 | 83.0 | 5.70e-01 | 100.0% | 32.6% |
| 3436926 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.90 | 84.0 | 7.56e-01 | 100.0% | 77.0% |
| 3615269 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.90 | 84.0 | 5.49e-01 | 100.0% | 27.1% |
| 3595990 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.90 | 84.0 | 5.72e-01 | 100.0% | 34.3% |
| 3280999 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.90 | 83.0 | 5.86e-01 | 100.0% | 36.8% |
| 3877612 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.90 | 84.0 | 6.14e-01 | 100.0% | 44.4% |
| 3676043 | 5076.2.1.10 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › PF29520 | 0.90 | 83.0 | 5.10e-01 | 100.0% | 21.4% |
| 3740547 | 5086.1.1.87 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ING | 0.90 | 84.0 | 6.52e-01 | 100.0% | 54.5% |
| 3841109 | 192.29.1.293 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › SHCBP_N | 0.90 | 83.0 | 6.70e-01 | 100.0% | 57.0% |
| 3356933 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.90 | 85.0 | 5.91e-01 | 100.0% | 36.8% |
| 3629501 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.90 | 77.0 | 4.49e-01 | 92.9% | 12.7% |
| 4213046 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.90 | 83.0 | 7.84e-01 | 100.0% | 89.2% |
| 3471215 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.89 | 84.0 | 7.50e-01 | 100.0% | 74.7% |
| 4349607 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.89 | 83.0 | 6.47e-01 | 100.0% | 51.8% |
| 4958743 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.89 | 82.0 | 6.34e-01 | 100.0% | 51.3% |
| 4028368 | 109.40.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › DNA polymerase alpha-binding protein Ctf4 C-terminal domain | 0.89 | 83.0 | 5.82e-01 | 100.0% | 58.1% |
| 3669818 | 3922.1.1.284 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › PF29520 | 0.89 | 82.0 | 5.48e-01 | 100.0% | 31.6% |
| 4036549 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.89 | 80.0 | 4.71e-01 | 96.4% | 14.8% |
| 3894565 | 4207.1.2.65 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › OLF | 0.89 | 82.0 | 4.80e-01 | 100.0% | 15.0% |
| 4644377 | 223.1.1.122 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › HisKA | 0.89 | 82.0 | 5.18e-01 | 100.0% | 23.7% |
| 4972401 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.88 | 80.0 | 5.18e-01 | 96.4% | 26.5% |
| 3937759 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.88 | 73.0 | 6.73e-01 | 89.3% | 71.4% |
| 3990182 | 3922.1.1.226 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Fy-3 | 0.88 | 81.0 | 6.25e-01 | 100.0% | 52.2% |
| 3995124 | 632.8.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 | 0.88 | 80.0 | 6.03e-01 | 100.0% | 45.6% |
| 4978165 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.88 | 79.0 | 5.20e-01 | 96.4% | 28.5% |
| 3346803 | 5076.2.1.10 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › PF29520 | 0.87 | 78.0 | 4.82e-01 | 100.0% | 19.7% |
| 4146694 | 192.29.1.277 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Dynamitin | 0.87 | 81.0 | 7.67e-01 | 100.0% | 89.2% |
| 3299091 | 3567.1.1.126 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › PF29520 | 0.87 | 78.0 | 5.79e-01 | 100.0% | 44.4% |
| 4977429 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.86 | 76.0 | 5.56e-01 | 96.4% | 40.7% |
| 3215140 | 3939.1.1.190 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › KIF21A_4th | 0.86 | 79.0 | 5.49e-01 | 100.0% | 34.5% |
| 3678111 | 3711.1.1.4 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › DOG1 | 0.86 | 77.0 | 4.93e-01 | 100.0% | 73.9% |
| 4883924 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.85 | 77.0 | 6.83e-01 | 100.0% | 71.2% |
| 3964578 | 5094.1.1.1 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH | 0.85 | 78.0 | 5.69e-01 | 100.0% | 40.7% |
| 4541195 | 3755.3.1.470 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › T3SSipB | 0.85 | 76.0 | 5.74e-01 | 100.0% | 43.8% |
| 4581983 | 5086.1.1.13 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › T3SSipB | 0.85 | 76.0 | 5.61e-01 | 100.0% | 42.9% |
| 2456957 | 192.13.1.1 ↗ | alpha bundles › Long alpha-hairpin › ISY1 N-terminal domain-like › ISY1 N-terminal domain-like › Isy1 | 0.85 | 77.0 | 7.74e-01 | 98.2% | 98.2% |
| 3415405 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.84 | 76.0 | 4.44e-01 | 100.0% | 13.5% |
| 3472169 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.84 | 77.0 | 5.47e-01 | 100.0% | 36.8% |
| 4124331 | 192.15.1.76 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › CUPID | 0.84 | 76.0 | 6.01e-01 | 100.0% | 54.5% |
| 4947400 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.84 | 76.0 | 5.59e-01 | 100.0% | 44.3% |
| 2524047 | 601.14.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin | 0.84 | 77.0 | 5.39e-01 | 100.0% | 34.6% |
| 4958744 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.84 | 75.0 | 5.96e-01 | 100.0% | 50.9% |
| 4999337 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.84 | 74.0 | 5.26e-01 | 96.4% | 61.3% |
| 3984016 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.84 | 76.0 | 6.40e-01 | 100.0% | 66.7% |
| 4300120 | 605.1.1.108 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › GrpE | 0.83 | 71.0 | 7.18e-01 | 92.9% | 94.5% |
| 3718795 | 109.4.1.257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PDS5 | 0.83 | 74.0 | 4.09e-01 | 98.2% | 16.2% |
| 3931593 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.83 | 70.0 | 6.20e-01 | 92.9% | 66.3% |
| 4977784 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.83 | 74.0 | 4.75e-01 | 96.4% | 46.8% |
| 4951260 | 601.14.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin | 0.83 | 74.0 | 5.47e-01 | 100.0% | 43.6% |
| 3622515 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.83 | 75.0 | 6.44e-01 | 100.0% | 64.7% |
| 4774281 | 1147.1.1.1 ↗ | alpha bundles › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › Occludin_ELL | 0.82 | 75.0 | 5.93e-01 | 100.0% | 53.2% |
| 4590389 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.82 | 74.0 | 5.27e-01 | 100.0% | 36.8% |
| 3286637 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.81 | 70.0 | 4.97e-01 | 96.4% | 34.5% |
| 4961346 | 3805.1.1.1 ↗ | alpha bundles › Hypothetical protein TTHB059 › Hypothetical protein TTHB059 › Hypothetical protein TTHB059 › DUF3209 | 0.81 | 72.0 | 5.54e-01 | 98.2% | 76.7% |
| 222003 | 133.1.1.1 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF | 0.81 | 74.0 | 4.98e-01 | 100.0% | 52.4% |
| 3998192 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.80 | 71.0 | 3.86e-01 | 100.0% | 5.8% |
| 3271963 | 133.1.1.1 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF | 0.76 | 67.0 | 4.81e-01 | 100.0% | 55.2% |
| 2914508 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.76 | 67.0 | 4.23e-01 | 100.0% | 21.1% |
| 3582116 | 1147.1.1.1 ↗ | alpha bundles › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › Occludin_ELL | 0.74 | 65.0 | 5.11e-01 | 100.0% | 75.8% |