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scnpilot_solids2_trim150_scaffold_133_prodigal-single.1__X__X__00249
Bact-Virscnpilot_solids2_trim150_scaffold_133_prodigal-single.1__X__X__00249
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-64
Domain cluster:
rep: S2_005_003_R2_scaffold_7_prodigal-single.1__X__X__00454__D3-61
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7xkcA01 | 3.30.10.10 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A | 0.75 | 66.0 | 5.96e-01 | 100.0% | 71.6% |
| 3w0eA00 | 3.30.10.10 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A | 0.73 | 60.0 | 5.78e-01 | 100.0% | 80.9% |
| 1cseI00 | 3.30.10.10 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A | 0.73 | 62.0 | 6.10e-01 | 100.0% | 93.7% |
| 1a10I00 | 3.30.10.10 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A | 0.72 | 63.0 | 6.18e-01 | 100.0% | 92.1% |
| 2kudA01 | 3.30.10.20 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › | 0.66 | 46.0 | 4.38e-01 | 100.0% | 61.4% |
| 3pvzA02 | 3.90.25.40 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › | 0.62 | 48.0 | 4.35e-01 | 84.5% | 88.6% |
| 3ahcA01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.62 | 49.0 | 3.04e-01 | 91.4% | 34.7% |
| 6dx5A00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.61 | 53.0 | 3.87e-01 | 100.0% | 81.1% |
| 3anuA01 | 2.40.37.20 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › D-serine dehydratase-like domain | 0.61 | 54.0 | 4.04e-01 | 100.0% | 97.2% |
| 2dbsA00 | 3.40.1350.20 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.60 | 47.0 | 4.35e-01 | 89.7% | 82.5% |
| 3py9A01 | 3.30.10.20 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › | 0.60 | 46.0 | 4.49e-01 | 84.5% | 92.4% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 40.0 | 3.03e-01 | 70.7% | 94.6% |
| 1d5rA01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.59 | 49.0 | 3.65e-01 | 100.0% | 68.4% |
| 4v15A01 | 2.40.37.20 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › D-serine dehydratase-like domain | 0.59 | 52.0 | 3.89e-01 | 100.0% | 95.1% |
| 3m9gA03 | 3.30.10.20 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › | 0.59 | 49.0 | 4.67e-01 | 100.0% | 79.1% |
| 2imgA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.58 | 50.0 | 3.79e-01 | 100.0% | 67.1% |
| 7kw0A02 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.58 | 49.0 | 3.68e-01 | 100.0% | 60.1% |
| 5e0yA00 | 3.30.10.20 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › | 0.58 | 45.0 | 4.30e-01 | 100.0% | 73.5% |
| 6cblD01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.56 | 46.0 | 3.26e-01 | 100.0% | 68.2% |
| 4lusB01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.55 | 42.0 | 3.15e-01 | 84.5% | 98.7% |
| 4ki9A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.55 | 44.0 | 3.40e-01 | 98.3% | 61.1% |
| 1yzyA01 | 3.40.50.10840 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Putative sugar-binding, N-terminal domain | 0.54 | 44.0 | 3.10e-01 | 100.0% | 31.2% |
| 1ndbA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.54 | 46.0 | 3.03e-01 | 100.0% | 57.9% |
| 2esbA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.54 | 43.0 | 3.33e-01 | 98.3% | 60.5% |
| 4e84B00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 41.0 | 2.73e-01 | 94.8% | 51.3% |
| 4kr6A01 | 3.30.2130.30 | Alpha Beta › 2-Layer Sandwich › VC0802-like › | 0.52 | 43.0 | 3.23e-01 | 100.0% | 92.4% |
| 1knwA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.51 | 41.0 | 2.89e-01 | 100.0% | 89.0% |
| 2gb3A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 41.0 | 3.09e-01 | 91.4% | 89.0% |
| 1i1nA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 40.0 | 2.81e-01 | 93.1% | 49.1% |
| 1b3qB02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.50 | 40.0 | 2.92e-01 | 93.1% | 48.6% |
| 2r5fA00 | 3.40.50.1360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 40.0 | 2.90e-01 | 100.0% | 85.8% |
| 2g8lA03 | 3.40.50.10880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Uncharacterised protein PF01937, DUF89, domain 3 | 0.50 | 42.0 | 3.23e-01 | 100.0% | 80.8% |
| 3h8lA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 38.0 | 2.91e-01 | 84.5% | 91.4% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3674451 | 294.1.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors › potato_inhibit | 0.77 | 68.0 | 6.57e-01 | 100.0% | 89.2% |
| 151608 | 294.1.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors › potato_inhibit | 0.76 | 66.0 | 6.25e-01 | 100.0% | 83.1% |
| 2874838 | 294.1.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors › potato_inhibit | 0.75 | 66.0 | 5.89e-01 | 100.0% | 69.0% |
| 3742000 | 294.1.1.0 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors | 0.75 | 59.0 | 6.09e-01 | 98.3% | 92.7% |
| 4533266 | 294.1.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors › potato_inhibit | 0.74 | 65.0 | 6.13e-01 | 98.3% | 82.9% |
| 3457336 | 294.1.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors › potato_inhibit | 0.74 | 65.0 | 6.12e-01 | 100.0% | 95.7% |
| 1831278 | 294.1.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors › potato_inhibit | 0.73 | 64.0 | 6.16e-01 | 100.0% | 86.6% |
| 3972532 | 294.1.1.2 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors › Inhibitor_I78 | 0.72 | 63.0 | 6.15e-01 | 100.0% | 90.6% |
| 1005023 | 294.1.1.2 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors › Inhibitor_I78 | 0.72 | 59.0 | 5.64e-01 | 100.0% | 80.9% |
| 3741562 | 294.1.1.2 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors › Inhibitor_I78 | 0.72 | 63.0 | 6.19e-01 | 100.0% | 98.4% |
| 4020903 | 294.1.1.0 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors | 0.70 | 59.0 | 5.74e-01 | 96.6% | 90.8% |
| 3196538 | 294.1.1.2 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors › Inhibitor_I78 | 0.70 | 60.0 | 5.77e-01 | 100.0% | 89.9% |
| 1120788 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.66 | 46.0 | 4.38e-01 | 100.0% | 61.4% |
| 3638982 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.63 | 53.0 | 3.68e-01 | 100.0% | 74.1% |
| 3592513 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 54.0 | 3.39e-01 | 100.0% | 72.2% |
| 5040986 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.62 | 52.0 | 4.62e-01 | 100.0% | 67.8% |
| 1145747 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.60 | 47.0 | 4.48e-01 | 84.5% | 91.0% |
| 1141805 | 4247.1.1.1 ↗ | a+b duplicates or obligate multimers › TTHC002-like › TTHC002-like › TTHC002-like › DUF5647 | 0.60 | 47.0 | 4.35e-01 | 89.7% | 82.5% |
| 4022826 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.60 | 51.0 | 3.76e-01 | 100.0% | 75.3% |
| 5038175 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.60 | 47.0 | 4.29e-01 | 89.7% | 83.7% |
| 4951610 | 294.2.1.0 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C | 0.59 | 46.0 | 4.74e-01 | 82.8% | 100.0% |
| 4356302 | 294.2.1.0 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C | 0.59 | 48.0 | 4.75e-01 | 100.0% | 85.0% |
| 4196487 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.59 | 48.0 | 3.49e-01 | 100.0% | 66.2% |
| 2800195 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.58 | 45.0 | 4.49e-01 | 84.5% | 90.0% |
| 3815755 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.58 | 44.0 | 3.33e-01 | 89.7% | 84.1% |
| 3279899 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.57 | 47.0 | 3.45e-01 | 100.0% | 59.0% |
| 3288204 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.57 | 48.0 | 4.63e-01 | 100.0% | 83.1% |
| 3446564 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.57 | 44.0 | 3.42e-01 | 89.7% | 84.8% |
| 3705897 | 2007.2.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › DSPc | 0.57 | 47.0 | 3.46e-01 | 98.3% | 62.3% |
| 3991481 | 221.1.1.163 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › GRHL1_C | 0.56 | 38.0 | 3.44e-01 | 70.7% | 96.2% |
| 3586987 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.56 | 43.0 | 4.32e-01 | 84.5% | 90.0% |
| 5019344 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.56 | 47.0 | 4.61e-01 | 100.0% | 87.3% |
| 4935046 | 2004.1.1.97 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB | 0.55 | 45.0 | 3.58e-01 | 94.8% | 95.4% |
| 3960451 | 294.2.1.0 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C | 0.54 | 46.0 | 4.47e-01 | 100.0% | 86.2% |
| 3611373 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.54 | 45.0 | 3.58e-01 | 100.0% | 81.4% |
| 4346910 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.54 | 46.0 | 3.07e-01 | 100.0% | 58.1% |
| 3668341 | 7577.1.1.7 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Cys_Met_Meta_PP | 0.53 | 43.0 | 2.90e-01 | 100.0% | 67.8% |
| 4958439 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.52 | 41.0 | 3.12e-01 | 91.4% | 68.4% |
| 3254537 | 2007.2.5.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese | 0.52 | 42.0 | 3.33e-01 | 98.3% | 81.3% |
| 3927599 | 2007.1.13.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase | 0.51 | 39.0 | 3.09e-01 | 89.7% | 57.9% |
| 4995270 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.51 | 42.0 | 2.99e-01 | 93.1% | 49.7% |
| 3278739 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.51 | 42.0 | 3.27e-01 | 96.6% | 54.3% |
| 5061317 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.50 | 42.0 | 3.23e-01 | 94.8% | 55.6% |