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ser_thr_kinase

Euk-Vir

Pandoravirus_inopinatum

ser_thr_kinase__YP_009118999__Pandoravirus_inopinatum__1605721

Identity

Accession:: YP_009118999 ↗
Protein ID:: ser_thr_kinase
Kingdom:: euk

Quality

77.7 mean pLDDT

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 45-147_359-427

PDB

Domain cluster: rep: FFSP_09252017_12_scaffold_64_prodigal-single.1__X__X__00352__D23-114_234-274

CATH (76)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1pc3A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.89	70.0	7.76e-01	97.1%	99.3%
4q8rA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.88	58.0	7.12e-01	86.6%	100.0%
4n13A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.87	58.0	7.05e-01	88.4%	99.1%
4ombA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.86	67.0	7.13e-01	94.8%	89.6%
4jwoA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.85	66.0	7.30e-01	99.4%	97.9%
1twyA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.85	56.0	6.85e-01	87.8%	100.0%
1ixhA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.84	73.0	7.71e-01	100.0%	98.7%
3fzvD02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.84	48.0	6.05e-01	87.8%	90.8%
4ecfA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.81	57.0	6.33e-01	88.4%	88.4%
2ql3A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.81	46.0	6.03e-01	77.3%	98.0%
3jv9A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.81	50.0	6.29e-01	88.4%	99.1%
5b7hB01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.81	47.0	5.85e-01	86.6%	91.7%
3hhfA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.80	46.0	6.02e-01	87.2%	98.0%
4kd5A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.80	56.0	6.53e-01	87.8%	99.2%
2onsA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.80	60.0	6.52e-01	95.3%	92.3%
4lvqA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.80	68.0	7.27e-01	95.9%	100.0%
3axfA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.80	54.0	6.45e-01	87.2%	100.0%
3kn3B01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.79	54.0	6.47e-01	84.3%	100.0%
2hxwA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.77	52.0	6.21e-01	87.2%	100.0%
3kosA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.76	46.0	5.81e-01	80.8%	99.0%
3onmA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.76	43.0	5.62e-01	90.7%	100.0%
5z50A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.75	49.0	5.56e-01	96.5%	85.5%
3ho7A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.75	47.0	5.63e-01	88.4%	92.4%
1sbpA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.74	58.0	6.17e-01	88.4%	91.4%
1p99A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.74	57.0	6.19e-01	93.0%	95.1%
3fd3A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.72	44.0	5.48e-01	89.5%	99.1%
2qsxA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.72	40.0	5.27e-01	90.1%	100.0%
3oxnA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.71	46.0	5.42e-01	87.8%	94.8%
2ozzA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.71	48.0	5.29e-01	84.9%	84.2%
4q5tA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.69	55.0	5.90e-01	87.8%	95.9%
1xvxA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.68	55.0	5.81e-01	89.5%	93.5%
1d9yA02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.66	54.0	5.74e-01	89.0%	95.4%
5f7vA00	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.66	55.0	4.16e-01	88.4%	80.2%
1eljA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.65	55.0	5.43e-01	89.0%	85.8%
4i1dC01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.65	53.0	5.35e-01	89.0%	84.7%
4gqoA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.64	55.0	5.20e-01	89.5%	85.0%
4ovjA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.64	54.0	5.36e-01	89.0%	85.1%
1eu8A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.64	54.0	5.23e-01	89.0%	86.3%
3dm0A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.63	54.0	4.13e-01	90.1%	81.9%
3ix1A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.62	58.0	5.52e-01	100.0%	99.0%
6dtuA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.62	53.0	5.19e-01	89.5%	85.9%
2x7qA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.62	58.0	5.44e-01	99.4%	99.5%
2gh9A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.61	51.0	5.02e-01	89.5%	87.1%
2xd3A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.61	51.0	5.06e-01	89.0%	85.6%
4fshA01	3.40.50.10860	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1	0.60	44.0	4.99e-01	84.3%	99.2%
4zs9A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.59	50.0	5.18e-01	89.5%	95.1%
2x26A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.58	52.0	5.07e-01	95.9%	98.9%
3l6gA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.57	47.0	5.00e-01	100.0%	99.3%
3tmgB01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.57	46.0	4.83e-01	92.4%	93.6%
3hriA02	3.40.50.800	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain	0.57	29.0	3.78e-01	75.6%	92.0%
2hxrB00	3.40.190.290	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 ›	0.57	48.0	4.51e-01	87.8%	99.5%
2d5cA01	3.40.50.10860	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1	0.56	37.0	4.36e-01	77.9%	100.0%
2xa5A00	3.40.190.170	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7	0.56	45.0	3.73e-01	86.0%	82.2%
4ne4A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.56	44.0	4.50e-01	85.5%	86.2%
3jyoA01	3.40.50.10860	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1	0.55	43.0	4.69e-01	83.7%	99.3%
1adjB02	3.40.50.800	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain	0.55	31.0	3.97e-01	100.0%	97.9%
1v95A01	3.40.50.800	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain	0.55	31.0	3.65e-01	92.4%	79.3%
1sw2A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.55	45.0	4.60e-01	86.6%	95.8%
1httA02	3.40.50.800	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain	0.55	31.0	3.92e-01	100.0%	95.9%
5swvC02	3.40.50.10860	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1	0.54	41.0	4.54e-01	83.1%	100.0%
2eggB01	3.40.50.10860	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1	0.54	44.0	4.67e-01	84.9%	99.3%
1qe0A02	3.40.50.800	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain	0.54	30.0	3.84e-01	94.2%	97.8%
3u62A01	3.40.50.10860	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1	0.54	39.0	4.43e-01	82.6%	100.0%
3fbtA01	3.40.50.10860	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1	0.54	41.0	4.52e-01	84.9%	98.6%
1wu7A03	3.40.50.800	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain	0.54	31.0	3.88e-01	100.0%	97.9%
2d0oB00	3.40.50.10150	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › B12-dependent dehydatase associated subunit	0.52	32.0	3.90e-01	100.0%	96.3%
1evlA02	3.40.50.800	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain	0.52	32.0	3.82e-01	100.0%	92.9%
3t38A02	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.52	33.0	3.71e-01	98.8%	84.4%
4hwtA02	3.40.50.800	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain	0.51	31.0	3.70e-01	98.8%	92.7%
2diyA01	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.51	27.0	3.19e-01	92.4%	74.8%
1gh2A00	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.51	26.0	3.17e-01	94.2%	74.8%
4j56E00	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.51	26.0	3.15e-01	92.4%	75.2%
1nw2A00	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.50	26.0	3.20e-01	94.2%	78.1%
7ec2A01	3.40.50.2000	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B;	0.50	32.0	3.44e-01	100.0%	72.2%
1tzbA02	3.40.50.10490	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1	0.50	29.0	3.24e-01	79.7%	69.8%
3a32A02	3.40.50.800	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain	0.50	32.0	3.55e-01	94.8%	78.7%

ECOD (86)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4933990	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.90	69.0	7.73e-01	96.5%	99.3%
5001566	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.90	71.0	7.88e-01	95.9%	99.3%
4955646	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.89	68.0	7.40e-01	95.9%	92.4%
3604355	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.89	72.0	7.62e-01	100.0%	92.9%
4947570	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.88	60.0	6.89e-01	88.4%	90.8%
4987268	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.88	74.0	7.77e-01	100.0%	94.3%
4936256	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.87	62.0	7.28e-01	88.4%	99.2%
4967407	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.87	60.0	7.21e-01	87.8%	100.0%
5016053	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.87	59.0	6.80e-01	87.8%	91.5%
5017139	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.86	59.0	7.00e-01	87.8%	98.3%
5002825	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.86	60.0	7.08e-01	87.8%	98.4%
5072579	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.84	58.0	6.91e-01	86.0%	100.0%
4974440	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.84	61.0	6.84e-01	93.6%	94.1%
3967342	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.83	67.0	7.06e-01	95.3%	90.5%
4930872	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.83	63.0	7.02e-01	100.0%	96.4%
4964541	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.82	66.0	7.16e-01	95.9%	98.6%
4455158	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.81	67.0	6.83e-01	99.4%	88.5%
3285595	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.81	58.0	6.01e-01	91.9%	78.1%
4500068	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.80	58.0	6.42e-01	89.5%	91.3%
4989559	7523.1.1.30 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_11	0.79	52.0	6.14e-01	87.2%	94.2%
4946064	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.79	61.0	6.46e-01	95.9%	88.4%
4625815	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.78	58.0	6.20e-01	95.3%	86.7%
4955711	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.78	59.0	6.38e-01	95.9%	91.0%
3285855	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.78	48.0	6.06e-01	86.6%	100.0%
4928239	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.77	71.0	5.71e-01	94.8%	100.0%
4263910	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.77	45.0	5.54e-01	76.7%	90.0%
5080029	7523.1.1.30 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_11	0.76	59.0	6.42e-01	94.8%	95.2%
3284370	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.76	46.0	5.81e-01	86.6%	99.0%
5061881	7523.1.1.30 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_11	0.76	60.0	6.37e-01	95.9%	91.6%
3973075	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.76	46.0	5.74e-01	92.4%	98.1%
3979934	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.75	44.0	5.59e-01	80.2%	98.0%
4934355	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.74	59.0	5.85e-01	90.7%	78.3%
3981333	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.68	38.0	4.90e-01	88.4%	97.9%
4038832	7523.1.1.4 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_3	0.63	44.0	4.80e-01	85.5%	87.1%
3969712	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.62	47.0	4.34e-01	76.7%	99.0%
4378054	7587.1.1.0 ↗	a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases	0.62	42.0	4.84e-01	87.2%	94.4%
5043968	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.60	53.0	5.11e-01	94.8%	98.9%
3290266	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.59	49.0	4.54e-01	86.6%	96.3%
2172372	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.58	44.0	4.21e-01	76.7%	95.3%
4173680	2007.1.6.4 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › Shikimate_dh_N	0.58	33.0	4.22e-01	94.2%	100.0%
4965625	7523.1.1.27 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › NMT1_2	0.58	52.0	4.30e-01	100.0%	97.2%
4667857	2007.1.6.4 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › Shikimate_dh_N	0.58	34.0	4.29e-01	91.9%	100.0%
3284267	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.57	47.0	4.42e-01	86.6%	99.5%
145336	2007.1.6.4 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › Shikimate_dh_N	0.57	32.0	4.18e-01	91.3%	100.0%
4515160	2007.1.6.4 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › Shikimate_dh_N	0.57	33.0	4.17e-01	93.6%	94.3%
1276447	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.57	29.0	3.62e-01	77.9%	80.0%
4476787	2007.1.6.4 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › Shikimate_dh_N	0.57	32.0	4.08e-01	94.2%	97.9%
4400644	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.57	47.0	4.30e-01	86.6%	97.7%
4079340	2007.1.6.4 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › Shikimate_dh_N	0.56	33.0	4.21e-01	90.1%	100.0%
3805614	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.56	31.0	3.66e-01	100.0%	77.4%
4117289	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.56	32.0	4.03e-01	100.0%	95.9%
4605764	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.56	32.0	4.11e-01	99.4%	100.0%
4618835	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.56	47.0	4.34e-01	87.8%	95.8%
4128301	2007.1.6.4 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › Shikimate_dh_N	0.56	35.0	4.19e-01	84.9%	96.4%
3630682	2485.1.1.1 ↗	a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin	0.56	28.0	3.31e-01	94.2%	68.7%
4121236	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.56	30.0	3.97e-01	100.0%	100.0%
4557982	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.55	31.0	3.91e-01	100.0%	95.8%
4415964	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.55	32.0	4.00e-01	100.0%	97.0%
4937592	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.55	28.0	3.77e-01	92.4%	100.0%
4410215	2007.1.1.12 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › Shikimate_dh_N	0.55	35.0	3.88e-01	100.0%	80.0%
4510149	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.55	32.0	3.94e-01	97.1%	95.0%
4401696	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.55	31.0	3.97e-01	100.0%	98.9%
3283446	7523.1.1.17 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › OpuAC	0.55	44.0	4.51e-01	85.5%	88.5%
4228229	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.55	32.0	3.93e-01	100.0%	95.0%
5047018	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.55	31.0	3.89e-01	95.9%	93.9%
4459236	7502.1.1.0 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS	0.55	32.0	3.99e-01	100.0%	97.0%
5033313	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.54	31.0	3.92e-01	100.0%	96.0%
5001263	7523.1.1.3 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5	0.54	49.0	4.51e-01	100.0%	95.7%
141123	2007.1.6.4 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › Shikimate_dh_N	0.54	34.0	4.11e-01	91.9%	98.1%
4671615	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.54	32.0	3.92e-01	100.0%	92.4%
4122293	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.54	31.0	3.92e-01	100.0%	96.0%
None	—		0.54	32.0	3.94e-01	100.0%	98.0%
4931821	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.54	29.0	3.61e-01	94.2%	85.4%
4345074	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.54	31.0	3.87e-01	100.0%	94.2%
4088338	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.54	32.0	3.90e-01	100.0%	97.0%
4407965	2007.1.1.12 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › Shikimate_dh_N	0.54	33.0	4.06e-01	91.3%	100.0%
4265378	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.54	31.0	3.86e-01	100.0%	94.2%
3981487	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.53	45.0	4.01e-01	89.0%	90.8%
4074525	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.53	31.0	3.85e-01	98.3%	96.0%
4122366	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.53	33.0	3.87e-01	98.8%	88.3%
3344258	2485.1.1.1 ↗	a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin	0.53	27.0	3.28e-01	94.2%	74.0%
4586541	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.53	31.0	3.91e-01	95.3%	100.0%
3507364	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.53	32.0	3.79e-01	98.8%	91.8%
4228426	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.52	30.0	3.80e-01	100.0%	96.0%
3186354	2007.1.1.12 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › Shikimate_dh_N	0.51	36.0	4.17e-01	91.9%	100.0%
4163844	7502.1.1.1 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon	0.50	29.0	3.61e-01	100.0%	97.9%

D2 high residues 154-303

PDB

Domain cluster: rep: hypothetical_protein_TW95_gp0253__YP_009119222__Pandoravirus_inopinatum__1605721__D208-350

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4lvqA02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.86	68.0	6.55e-01	100.0%	73.5%
1a40A02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.85	69.0	6.69e-01	100.0%	75.9%
2o1mA02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.63	38.0	4.13e-01	100.0%	71.9%
6ojaA02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.57	38.0	4.33e-01	100.0%	91.7%
4ryaA02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.57	50.0	4.53e-01	100.0%	69.1%
2b3fC02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.57	49.0	4.44e-01	100.0%	69.5%
2yv4A00	3.40.50.11030	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Threonylcarbamoyl-AMP synthase, C-terminal domain	0.50	32.0	3.78e-01	98.7%	94.1%
1dp4C02	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.50	40.0	3.61e-01	84.0%	69.1%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3603435	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.87	74.0	6.68e-01	100.0%	67.7%
4933991	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.87	71.0	6.44e-01	100.0%	65.1%
4531984	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.86	68.0	6.23e-01	100.0%	64.2%
3985645	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.86	70.0	6.50e-01	100.0%	70.0%
3974584	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.75	45.0	5.42e-01	100.0%	90.0%
3165988	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.74	45.0	5.26e-01	100.0%	85.7%
1519583	7523.1.1.8 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1	0.57	49.0	4.85e-01	100.0%	88.0%
2600407	7523.1.1.32 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › NMT1_3	0.56	34.0	4.07e-01	78.7%	90.8%
3359655	2004.1.1.1 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA	0.50	35.0	3.62e-01	78.0%	76.3%

D3 high residues 510-658

PDB

Domain cluster: rep: hypothetical_protein_TW95_gp0253__YP_009119222__Pandoravirus_inopinatum__1605721__D208-350

CATH (19)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1a40A02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.92	83.0	7.92e-01	100.0%	83.7%
4lvqA02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.91	80.0	7.71e-01	100.0%	81.9%
1pc3A02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.90	84.0	7.74e-01	100.0%	78.8%
4n13A02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.84	66.0	6.90e-01	100.0%	87.6%
1twyD02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.84	64.0	6.73e-01	100.0%	86.7%
4jwoA02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.80	64.0	6.52e-01	100.0%	86.7%
2capA02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.78	74.0	7.29e-01	100.0%	98.1%
2hxrB00	3.40.190.290	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 ›	0.76	48.0	4.34e-01	96.0%	47.0%
4kd5A02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.70	46.0	5.29e-01	96.0%	92.5%
2h5yA02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.69	47.0	5.32e-01	95.3%	92.0%
1ftkA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.69	45.0	5.30e-01	94.6%	95.2%
3oxnB02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.67	43.0	5.09e-01	96.0%	96.0%
3mamA02	3.40.190.120	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Osmoprotection protein (prox); domain 2	0.66	44.0	5.10e-01	96.0%	95.2%
5l9iB02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.63	50.0	5.05e-01	94.6%	83.2%
4ntlA02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.61	42.0	4.88e-01	93.3%	99.1%
3k5iD01	3.40.50.20	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.56	34.0	3.87e-01	89.9%	80.0%
2z8fB02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.54	49.0	4.24e-01	100.0%	74.5%
2kl3A01	3.40.250.10	Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain	0.53	33.0	3.80e-01	88.6%	85.8%
1fvpA00	3.20.20.30	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain	0.51	41.0	3.57e-01	86.6%	93.1%

ECOD (34)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4928239	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.93	84.0	6.45e-01	100.0%	46.6%
3985645	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.92	83.0	7.69e-01	100.0%	77.2%
3603435	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.92	87.0	7.77e-01	100.0%	74.9%
4531984	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.91	81.0	7.35e-01	100.0%	72.1%
4929664	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.91	79.0	7.23e-01	100.0%	71.9%
3951711	7523.1.1.8 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1	0.90	84.0	7.65e-01	100.0%	76.3%
3010938	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.90	72.0	7.01e-01	100.0%	76.1%
4933991	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.89	82.0	7.31e-01	100.0%	72.3%
4936246	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.88	66.0	7.09e-01	100.0%	87.7%
4976618	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.87	69.0	7.18e-01	100.0%	87.9%
4948311	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.86	67.0	5.41e-01	100.0%	46.1%
4947571	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.84	65.0	6.76e-01	100.0%	85.0%
1518768	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.84	64.0	6.71e-01	100.0%	86.7%
3969205	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.77	48.0	5.88e-01	95.3%	97.9%
3944973	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.76	49.0	5.69e-01	96.0%	90.5%
3975885	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.75	59.0	6.21e-01	100.0%	88.9%
3965932	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.74	71.0	6.59e-01	100.0%	96.7%
3386891	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.74	66.0	6.47e-01	100.0%	87.5%
3284547	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.73	47.0	5.33e-01	96.0%	86.4%
3971456	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.73	46.0	4.01e-01	96.0%	42.7%
3974584	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.71	46.0	5.43e-01	94.0%	96.0%
3165988	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.71	46.0	5.39e-01	96.0%	93.3%
1518715	7523.1.1.30 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_11	0.71	49.0	5.51e-01	96.0%	92.9%
5060879	7523.1.1.30 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_11	0.70	47.0	5.46e-01	96.0%	95.2%
1521281	7523.1.1.30 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_11	0.70	45.0	5.26e-01	96.0%	92.5%
4263411	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.69	42.0	4.76e-01	97.3%	78.3%
3968439	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.68	43.0	5.16e-01	96.0%	95.0%
4288612	7523.1.1.30 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_11	0.67	44.0	5.14e-01	96.0%	95.2%
3515881	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.65	49.0	4.72e-01	77.2%	97.6%
4032167	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.62	38.0	4.63e-01	96.0%	94.7%
3489816	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.57	35.0	4.04e-01	97.3%	82.7%
4080756	2004.1.1.45 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MutS_V	0.50	44.0	3.40e-01	96.0%	53.3%
3747143	7524.1.1.1 ↗	a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh	0.50	35.0	3.58e-01	89.9%	73.1%
4568224	2004.1.1.45 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MutS_V	0.50	44.0	3.40e-01	96.0%	54.9%

D4 medium residues 428-479

PDB

Domain cluster: representative

CATH (88)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1ixhA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.88	77.0	5.30e-01	96.2%	31.6%
4ecfA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.87	78.0	5.61e-01	98.1%	37.0%
1pc3A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.86	76.0	5.39e-01	96.2%	35.5%
4q8rA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.85	72.0	5.49e-01	92.3%	42.1%
4jwoA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.85	75.0	5.33e-01	96.2%	35.5%
1twyA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.85	73.0	5.54e-01	94.2%	42.6%
4n13A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.83	71.0	5.45e-01	96.2%	43.1%
4ombA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.80	68.0	4.83e-01	96.2%	32.5%
3fzvD02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.79	67.0	5.27e-01	96.2%	46.8%
5b7hB01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.79	68.0	5.31e-01	96.2%	47.2%
2onsA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.79	68.0	4.99e-01	100.0%	37.8%
4aq4A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.79	69.0	4.58e-01	100.0%	29.7%
1i6aA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.78	67.0	5.26e-01	96.2%	47.2%
2hxrB00	3.40.190.290	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 ›	0.78	67.0	4.44e-01	96.2%	25.2%
2ql3A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.77	66.0	5.31e-01	96.2%	51.5%
3l6gA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.77	67.0	4.71e-01	98.1%	33.3%
3tmgB01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.76	64.0	4.52e-01	94.2%	31.4%
4kd5A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.76	63.0	4.85e-01	96.2%	40.7%
3jv9A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.75	64.0	5.07e-01	96.2%	47.2%
5kztA03	3.10.105.10	Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3	0.75	64.0	4.21e-01	98.1%	24.2%
3ho7A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.75	64.0	4.89e-01	96.2%	43.2%
1sbpA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.74	61.0	4.53e-01	98.1%	37.1%
3hhfA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.74	61.0	4.90e-01	96.2%	47.5%
1xs5A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.73	61.0	4.62e-01	98.1%	38.1%
3up9A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.72	60.0	4.50e-01	98.1%	37.7%
3fd3A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.72	61.0	4.84e-01	96.2%	47.2%
1ixcA02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.71	60.0	4.93e-01	98.1%	52.0%
4ovjA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.71	59.0	4.12e-01	98.1%	32.0%
3onmA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.70	58.0	4.81e-01	94.2%	52.1%
3qufA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.70	58.0	4.25e-01	98.1%	35.3%
3jzjA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.70	57.0	3.94e-01	96.2%	30.2%
4q5tA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.70	57.0	4.24e-01	96.2%	35.4%
2f5xA01	3.40.190.150	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bordetella uptake gene, domain 1	0.69	58.0	4.08e-01	98.1%	32.6%
3kosA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.69	56.0	4.52e-01	96.2%	46.6%
2uvgA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.69	55.0	3.94e-01	96.2%	31.6%
5iaiA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.68	56.0	3.91e-01	98.1%	29.7%
5f7vA00	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.68	57.0	3.43e-01	98.1%	14.2%
3uorB01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.68	56.0	3.86e-01	96.2%	29.1%
4myrC00	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.68	55.0	4.29e-01	96.2%	61.1%
1eu8A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.67	55.0	3.89e-01	100.0%	29.5%
4p1zA00	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.66	54.0	4.24e-01	98.1%	45.7%
5z6bA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.66	52.0	3.74e-01	94.2%	31.2%
4n03A02	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.66	53.0	3.83e-01	98.1%	46.0%
1efaA02	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.66	53.0	4.14e-01	96.2%	64.3%
4y9tA01	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.66	53.0	4.02e-01	98.1%	37.2%
6i3gA03	3.10.105.10	Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3	0.65	54.0	3.68e-01	98.1%	25.4%
4xijA01	3.40.50.10860	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1	0.65	53.0	4.17e-01	100.0%	42.6%
1npdB01	3.40.50.10860	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1	0.65	53.0	4.04e-01	100.0%	37.0%
3lvuB00	3.10.105.10	Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3	0.65	54.0	3.55e-01	100.0%	23.0%
1abeA01	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.65	52.0	3.98e-01	96.2%	58.0%
2d5cA01	3.40.50.10860	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1	0.64	50.0	4.10e-01	96.2%	43.4%
6ecpB01	3.40.50.10860	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1	0.64	53.0	4.00e-01	100.0%	35.9%
3ry3A02	3.10.105.10	Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3	0.64	52.0	3.47e-01	100.0%	24.6%
3nbmA00	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.63	50.0	4.22e-01	98.1%	72.1%
3lopA02	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.62	51.0	3.85e-01	98.1%	57.7%
1h9cA00	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.62	52.0	4.26e-01	100.0%	69.8%
2c2xA02	3.40.50.10860	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1	0.61	50.0	3.74e-01	100.0%	35.1%
1edzA02	3.40.50.10860	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1	0.61	49.0	3.87e-01	100.0%	40.5%
3u80A00	3.40.50.9100	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dehydroquinase, class II	0.61	49.0	3.83e-01	96.2%	40.2%
1uqwA03	3.10.105.10	Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3	0.61	48.0	3.34e-01	100.0%	25.3%
1akqA00	3.40.50.360	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain	0.61	50.0	3.74e-01	98.1%	54.4%
2h3hA01	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.61	48.0	3.68e-01	98.1%	35.1%
4xxhA01	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.60	48.0	3.72e-01	98.1%	38.4%
3slrA01	3.40.50.1110	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase	0.60	48.0	3.31e-01	98.1%	24.4%
4r2fA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.60	47.0	3.35e-01	96.2%	28.7%
3jyoA01	3.40.50.10860	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1	0.60	48.0	3.69e-01	98.1%	39.6%
1z9bA01	3.40.50.10050	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor IF- 2, domain 3	0.60	47.0	4.22e-01	98.1%	91.7%
3k9cB01	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.59	48.0	3.80e-01	100.0%	40.5%
3t66A02	3.10.105.10	Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3	0.59	47.0	3.26e-01	98.1%	25.9%
1eljA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.59	46.0	3.38e-01	98.1%	68.9%
4r2bA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.59	46.0	3.35e-01	100.0%	31.0%
3ksmA01	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.59	47.0	3.74e-01	98.1%	41.3%
5swvC02	3.40.50.10860	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1	0.59	47.0	3.62e-01	98.1%	36.8%
3jvdB01	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.58	45.0	3.66e-01	96.2%	41.8%
1t4yA01	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.58	44.0	3.90e-01	94.2%	57.3%
2xvyA02	3.40.50.1400	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.57	46.0	3.67e-01	98.1%	79.8%
3lmkA02	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.57	45.0	3.28e-01	94.2%	32.5%
4rk6A01	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.57	44.0	3.50e-01	98.1%	38.1%
4impA02	3.40.50.11460	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.57	45.0	3.17e-01	98.1%	43.1%
2diyA01	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.57	46.0	3.76e-01	96.2%	48.6%
4rxuA01	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.57	44.0	3.44e-01	100.0%	56.5%
3hs3A01	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.56	44.0	3.56e-01	98.1%	42.1%
2uzhA00	3.30.1330.50	Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	0.56	43.0	3.30e-01	96.2%	35.9%
3ombA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.55	43.0	3.03e-01	100.0%	29.7%
3huuC02	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.54	41.0	3.31e-01	94.2%	38.3%
1b1aA00	3.40.50.280	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain	0.54	44.0	3.41e-01	100.0%	62.8%
4q6bA02	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.53	41.0	3.19e-01	96.2%	35.1%
3co5A00	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.51	40.0	3.17e-01	96.2%	75.4%

ECOD (89)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5001566	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.88	78.0	5.57e-01	96.2%	35.7%
4987268	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.88	79.0	5.44e-01	98.1%	32.3%
4500068	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.88	76.0	5.43e-01	94.2%	35.5%
4955646	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.87	80.0	5.64e-01	100.0%	36.8%
4933990	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.86	76.0	5.46e-01	96.2%	37.0%
4939067	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.86	76.0	5.45e-01	96.2%	37.0%
5054839	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.85	75.0	6.04e-01	96.2%	52.6%
5016053	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.85	76.0	5.57e-01	98.1%	39.5%
2703489	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.85	76.0	6.31e-01	98.1%	58.6%
1518769	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.85	73.0	6.40e-01	94.2%	65.3%
3604355	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.84	76.0	5.34e-01	100.0%	34.4%
4974440	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.84	75.0	5.49e-01	100.0%	39.3%
4936256	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.84	73.0	5.42e-01	96.2%	40.0%
4930872	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.83	75.0	5.39e-01	100.0%	38.6%
4964541	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.83	72.0	5.15e-01	96.2%	35.2%
5017139	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.83	73.0	5.51e-01	98.1%	42.5%
4455158	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.83	73.0	4.99e-01	96.2%	30.3%
1521757	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.83	71.0	6.27e-01	96.2%	65.8%
3956127	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.83	73.0	5.08e-01	96.2%	32.3%
4209998	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.81	71.0	4.42e-01	96.2%	19.2%
4131080	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.81	73.0	5.02e-01	100.0%	32.1%
1520702	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.81	71.0	5.74e-01	96.2%	52.6%
4008498	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.81	71.0	5.30e-01	96.2%	42.5%
3285595	7523.1.1.23 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2	0.80	69.0	4.82e-01	96.2%	31.2%
5005063	7523.1.1.30 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_11	0.79	70.0	5.13e-01	100.0%	38.5%
4359334	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.79	70.0	5.46e-01	100.0%	49.1%
1549374	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.79	68.0	6.04e-01	96.2%	69.9%
4009807	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.78	66.0	5.19e-01	96.2%	47.3%
3974136	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.78	64.0	5.24e-01	98.1%	49.0%
3496859	7585.1.1.1 ↗	a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Sec1	0.77	55.0	3.55e-01	76.9%	54.9%
1522282	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.77	65.0	5.83e-01	96.2%	68.9%
2482253	7523.1.1.30 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_11	0.76	63.0	5.36e-01	96.2%	58.4%
1547795	7523.1.1.17 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › OpuAC	0.76	65.0	5.59e-01	96.2%	60.2%
3978511	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.76	65.0	5.15e-01	96.2%	48.6%
1916724	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.76	65.0	5.79e-01	96.2%	69.9%
1521203	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.76	65.0	5.80e-01	96.2%	69.9%
4008286	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.76	65.0	4.26e-01	96.2%	24.3%
3479299	7585.1.1.1 ↗	a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Sec1	0.75	54.0	4.24e-01	76.9%	38.2%
4677521	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.75	65.0	4.27e-01	98.1%	25.1%
3959650	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.75	63.0	3.94e-01	100.0%	17.5%
3950738	7523.1.1.30 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_11	0.75	63.0	3.90e-01	100.0%	17.0%
3284370	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.74	62.0	4.99e-01	96.2%	47.6%
4370818	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.74	61.0	6.15e-01	94.2%	96.2%
4263910	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.73	61.0	4.90e-01	98.1%	46.4%
3967274	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.73	63.0	5.03e-01	98.1%	54.3%
3517824	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.72	62.0	4.88e-01	100.0%	45.2%
3703625	7585.1.1.1 ↗	a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Sec1	0.72	50.0	3.90e-01	73.1%	34.5%
3166332	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.72	61.0	4.50e-01	98.1%	38.6%
4152850	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.72	62.0	4.82e-01	100.0%	44.1%
3587006	2007.2.2.2 ↗	a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › PTS_IIB	0.71	58.0	4.77e-01	96.2%	73.1%
1919887	7523.1.1.8 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1	0.71	59.0	4.63e-01	98.1%	49.2%
4663229	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.71	59.0	3.95e-01	98.1%	23.6%
5000239	7523.1.1.3 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5	0.70	59.0	3.46e-01	100.0%	11.1%
4377573	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.70	60.0	3.91e-01	98.1%	26.8%
3980908	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.70	59.0	4.73e-01	96.2%	47.6%
3587932	7523.1.1.8 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1	0.70	58.0	4.19e-01	98.1%	35.2%
3982913	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.70	59.0	4.71e-01	98.1%	54.5%
4434724	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.70	59.0	4.73e-01	100.0%	53.6%
3282261	7523.1.1.8 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1	0.70	57.0	3.93e-01	94.2%	31.9%
5063270	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.69	60.0	4.00e-01	100.0%	29.0%
3967678	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.69	56.0	3.82e-01	96.2%	24.3%
2527000	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.69	57.0	4.43e-01	98.1%	46.0%
1884680	7523.1.1.8 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1	0.68	57.0	4.51e-01	98.1%	47.8%
2773987	7523.1.1.3 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5	0.68	57.0	3.83e-01	100.0%	23.9%
2771089	2007.1.6.4 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › Shikimate_dh_N	0.67	55.0	4.55e-01	100.0%	49.0%
1518723	7523.1.1.8 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1	0.67	55.0	4.37e-01	100.0%	45.9%
4129373	2007.1.3.0 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like	0.66	55.0	4.18e-01	100.0%	57.1%
3691936	2007.1.6.2 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › THF_DHG_CYH	0.66	56.0	4.06e-01	100.0%	33.5%
5079103	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.66	54.0	4.15e-01	100.0%	37.9%
4261511	2007.1.6.2 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › THF_DHG_CYH	0.65	54.0	4.18e-01	100.0%	40.8%
1123475	2007.1.3.0 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like	0.64	51.0	4.02e-01	96.2%	60.6%
3980081	2007.2.2.2 ↗	a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › PTS_IIB	0.64	51.0	4.36e-01	94.2%	53.8%
4945360	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.64	52.0	3.52e-01	100.0%	24.8%
2603107	7523.1.1.21 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › DUF3502	0.64	53.0	4.15e-01	96.2%	47.1%
3742232	2007.1.1.12 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › Shikimate_dh_N	0.64	49.0	4.05e-01	98.1%	44.8%
4032825	7523.1.1.22 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › ABC2_membrane_3	0.62	51.0	3.85e-01	94.2%	37.8%
1879147	2007.1.2.4 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor	0.62	50.0	3.99e-01	98.1%	42.5%
4048656	2007.1.6.2 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › THF_DHG_CYH	0.61	51.0	4.08e-01	100.0%	46.1%
1523922	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.61	49.0	3.95e-01	96.2%	47.4%
3407203	2007.1.16.1 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 › Diphthamide_syn	0.60	45.0	3.36e-01	96.2%	30.0%
4338175	2485.1.1.27 ↗	a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › KaiB	0.60	48.0	3.95e-01	98.1%	49.1%
4009283	2004.1.1.196 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22	0.60	45.0	3.31e-01	90.4%	75.9%
3411651	7510.1.1.0 ↗	a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like	0.59	47.0	3.44e-01	100.0%	29.4%
4667158	2007.1.2.11 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4	0.59	47.0	3.60e-01	100.0%	35.2%
4410215	2007.1.1.12 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › Shikimate_dh_N	0.58	47.0	3.67e-01	100.0%	40.0%
3275337	7526.1.1.1 ↗	a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2	0.58	47.0	3.69e-01	100.0%	39.2%
3708170	2007.1.16.1 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 › Diphthamide_syn	0.57	42.0	3.20e-01	98.1%	30.0%
3173168	2004.1.1.338 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SPA	0.53	43.0	3.32e-01	98.1%	63.7%
3466788	2005.1.1.3 ↗	a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp	0.52	36.0	2.99e-01	78.8%	36.4%

D5 medium residues 480-496_709-755

PDB

Domain cluster: representative

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4638268	3666.1.1.1 ↗	extended segments › 30S ribosomal protein S21 › 30S ribosomal protein S21 › 30S ribosomal protein S21 › Ribosomal_S21	0.55	32.0	3.38e-01	73.4%	63.3%

D6 medium residues 497-509_659-708

PDB

Domain cluster: representative

CATH (12)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4xchA00	3.30.1360.80	Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS)	0.62	51.0	3.90e-01	92.1%	93.3%
1vx4407	3.30.70.240	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.58	45.0	4.43e-01	87.3%	100.0%
3encA00	3.30.310.50	Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain	0.55	41.0	3.93e-01	85.7%	96.2%
2zx2A01	2.60.120.740	Mainly Beta › Sandwich › Jelly Rolls › Rhamnose-binding lectin domain (RBL)	0.54	46.0	4.10e-01	100.0%	83.3%
1rwuA00	3.30.70.260	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain	0.54	41.0	3.78e-01	85.7%	86.2%
2l3mA00	3.30.70.100	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.54	41.0	4.00e-01	85.7%	94.4%
1q8bA00	3.30.70.100	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.53	45.0	4.06e-01	98.4%	96.8%
5ajiB03	3.30.70.100	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.52	41.0	3.63e-01	87.3%	94.7%
4e4tA03	3.30.470.20	Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain	0.51	40.0	2.90e-01	87.3%	50.5%
1j6wA00	3.30.1360.80	Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS)	0.51	38.0	3.05e-01	88.9%	79.5%
3v2uC02	3.30.70.3170	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.51	40.0	3.64e-01	93.7%	97.9%
2q5wE00	3.90.1170.40	Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Molybdopterin biosynthesis MoaE subunit	0.51	38.0	2.98e-01	79.4%	79.6%

ECOD (27)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3429509	323.1.1.7 ↗	a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase	0.57	44.0	3.11e-01	84.1%	71.0%
4886521	309.1.1.3 ↗	a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › LuxS	0.56	44.0	3.48e-01	92.1%	89.0%
4885955	309.1.1.3 ↗	a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › LuxS	0.56	44.0	3.47e-01	92.1%	87.7%
4951920	304.39.1.1 ↗	a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd	0.56	42.0	3.59e-01	81.0%	80.6%
4096536	309.1.1.3 ↗	a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › LuxS	0.55	45.0	3.44e-01	92.1%	88.1%
1172545	304.39.1.1 ↗	a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd	0.55	42.0	3.59e-01	82.5%	82.4%
5036264	304.39.1.1 ↗	a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd	0.55	41.0	3.52e-01	81.0%	81.9%
5013852	3501.1.1.1 ↗	a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1	0.55	41.0	3.80e-01	84.1%	98.8%
5019631	304.39.1.1 ↗	a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd	0.55	42.0	3.62e-01	82.5%	84.0%
4937238	304.39.1.1 ↗	a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd	0.55	41.0	3.56e-01	82.5%	81.9%
5060761	304.39.1.1 ↗	a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd	0.54	40.0	3.48e-01	82.5%	83.8%
3171965	323.1.1.12 ↗	a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › TRI-like_N	0.54	41.0	2.88e-01	84.1%	75.8%
4293141	304.39.1.1 ↗	a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd	0.54	40.0	3.57e-01	84.1%	89.0%
151816	304.39.1.1 ↗	a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd	0.54	40.0	3.52e-01	82.5%	84.2%
3701221	304.43.1.0 ↗	a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725	0.53	43.0	3.71e-01	90.5%	87.6%
4981037	304.39.1.1 ↗	a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd	0.53	41.0	3.73e-01	85.7%	97.8%
3602951	304.39.1.1 ↗	a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd	0.52	40.0	3.47e-01	85.7%	83.8%
3700806	304.31.1.3 ↗	a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase › FAZ1_cons	0.52	37.0	3.25e-01	74.6%	89.5%
3706819	304.49.1.6 ↗	a+b two layers › Alpha-beta plaits › TRADD, N-terminal domain/Dystroglycan, domain 2 › TRADD, N-terminal domain/Dystroglycan, domain 2 › FAZ1_cons	0.52	38.0	3.15e-01	79.4%	77.5%
5076402	304.39.1.0 ↗	a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain	0.51	38.0	3.54e-01	82.5%	92.9%
5049194	304.4.1.0 ↗	a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel	0.51	42.0	3.94e-01	98.4%	91.8%
3566319	304.9.1.63 ↗	a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_PARP14_3	0.51	39.0	3.67e-01	90.5%	92.9%
3491970	206.1.1.1 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase	0.51	38.0	2.46e-01	82.5%	37.3%
4990743	304.42.1.1 ↗	a+b two layers › Alpha-beta plaits › Molybdenum cofactor biosynthesis protein C, MoaC › Molybdenum cofactor biosynthesis protein C, MoaC › MoaC	0.51	40.0	3.60e-01	98.4%	94.3%
3307617	304.39.1.0 ↗	a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain	0.51	38.0	3.23e-01	82.5%	81.8%
4567496	331.2.1.1 ↗	a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV	0.50	34.0	3.26e-01	71.4%	84.0%
4438667	304.42.1.0 ↗	a+b two layers › Alpha-beta plaits › Molybdenum cofactor biosynthesis protein C, MoaC › Molybdenum cofactor biosynthesis protein C, MoaC	0.50	40.0	3.60e-01	100.0%	93.3%

D7 medium residues 756-810

PDB

Domain cluster: rep: hypothetical_protein_TW95_gp0254__YP_009119223__Pandoravirus_inopinatum__1605721__D7-54

D8 medium residues 867-923

PDB