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ser_thr_kinase

Euk-Vir

Pandoravirus_inopinatum

ser_thr_kinase__YP_009119937__Pandoravirus_inopinatum__1605721

Identity

Accession:
YP_009119937 ↗
Protein ID:
ser_thr_kinase
Kingdom:
euk

Quality

79.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D3 medium residues 1-58_240-333
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1pc3A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.87 69.0 7.19e-01 91.4% 87.9%
1ixhA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.86 76.0 7.54e-01 95.4% 89.0%
4jwoA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.82 64.0 6.63e-01 94.1% 86.5%
2capA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.80 71.0 6.22e-01 94.7% 91.4%
4ombA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.79 62.0 6.18e-01 88.8% 79.2%
2x7qA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.61 55.0 4.96e-01 97.4% 90.2%
4qxdB02 3.40.190.80 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.59 42.0 4.45e-01 79.6% 84.7%
6hciB00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 26.0 3.10e-01 93.4% 63.6%
1bdfA01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.54 27.0 3.12e-01 88.2% 63.2%
4k59A00 2.60.40.4380 Mainly Beta › Sandwich › Immunoglobulin-like › Translational regulator CsrA 0.53 21.0 2.94e-01 78.9% 75.8%
6ne6A01 1.10.400.10 Mainly Alpha › Orthogonal Bundle › GI Alpha 1, domain 2-like › GI Alpha 1, domain 2-like 0.52 31.0 3.49e-01 92.8% 76.3%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4987268 7523.1.1.23 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2 0.88 74.0 7.36e-01 94.7% 84.2%
3967342 7523.1.1.23 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2 0.79 64.0 6.30e-01 95.4% 80.4%
3387956 7523.1.1.30 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_11 0.76 54.0 5.92e-01 81.6% 87.2%
4052320 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.76 66.0 6.34e-01 90.1% 86.5%
3986332 7523.1.1.30 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_11 0.74 58.0 4.46e-01 81.6% 78.3%
4234518 7523.1.1.42 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Lipoprotein_8 0.65 52.0 4.27e-01 83.6% 70.9%
1221881 11.1.1.3 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.54 26.0 3.19e-01 94.7% 69.6%
4162019 328.2.1.1 a+b two layers › IF3-like › C-terminal domain of ProRS › C-terminal domain of ProRS › ProRS-C_1 0.52 28.0 3.78e-01 81.6% 100.0%
4928076 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.52 28.0 3.56e-01 96.7% 92.8%
4030054 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.50 25.0 3.18e-01 78.3% 78.9%
D4 medium residues 334-412_574-684
PDB
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4q8rA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.86 50.0 6.47e-01 86.3% 96.5%
1ixhA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.85 65.0 7.25e-01 100.0% 96.1%
4n13A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.84 49.0 6.30e-01 87.4% 94.8%
4jwoA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.82 57.0 6.57e-01 98.9% 94.3%
4ombA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.81 56.0 6.21e-01 94.7% 86.4%
4lvqA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.80 61.0 6.83e-01 96.3% 97.4%
3ho7A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.78 44.0 5.49e-01 88.9% 89.0%
5z50A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.76 43.0 5.17e-01 96.3% 80.9%
3k2dA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.75 48.0 5.70e-01 84.7% 92.4%
3kn3B01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.73 45.0 5.55e-01 84.2% 95.8%
2capA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.73 68.0 6.49e-01 98.9% 95.0%
2p3nA02 3.40.190.80 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.70 41.0 5.00e-01 87.9% 89.3%
3n5lA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.69 47.0 5.42e-01 95.3% 94.9%
1us5A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.69 51.0 5.54e-01 100.0% 91.1%
1ve4A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.68 40.0 4.99e-01 87.9% 93.2%
4i3yA02 3.40.190.80 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.68 39.0 4.85e-01 83.7% 90.0%
1o63A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.66 41.0 5.09e-01 87.4% 97.5%
1zpvA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.66 27.0 3.88e-01 94.7% 81.2%
1h3dA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.65 43.0 5.10e-01 88.4% 96.2%
2vd3A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.65 40.0 4.92e-01 88.4% 94.4%
5zhhA02 3.40.190.80 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.64 36.0 4.51e-01 77.4% 89.0%
2pcrA02 3.40.190.80 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.64 35.0 4.45e-01 77.4% 88.7%
5i3sC02 3.40.190.80 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.64 39.0 4.61e-01 85.8% 87.1%
4qxdB02 3.40.190.80 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.63 39.0 4.62e-01 85.8% 88.5%
1zbmA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.63 47.0 4.91e-01 93.2% 84.3%
3b8bA02 3.40.190.80 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.62 34.0 4.29e-01 96.3% 90.1%
5lomA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.61 42.0 4.70e-01 90.5% 88.7%
4f3sA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.60 39.0 4.51e-01 84.7% 91.7%
2ahoB03 3.30.70.1130 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha 0.60 25.0 3.54e-01 88.4% 80.7%
6o9aA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.60 42.0 4.68e-01 91.6% 90.7%
4hcwA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.59 49.0 5.10e-01 88.9% 93.3%
1a7gE00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.58 24.0 3.54e-01 95.3% 86.6%
4malA00 1.20.58.2200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 19.0 3.29e-01 97.9% 91.5%
2pfyA00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.56 46.0 3.92e-01 85.3% 79.7%
2bopA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.55 23.0 3.20e-01 93.2% 78.8%
2zzvA00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.55 47.0 3.87e-01 90.0% 91.8%
4pbqA00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.55 47.0 3.99e-01 91.1% 97.7%
6wgmA00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.55 46.0 3.93e-01 89.5% 95.1%
2nxoD01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.54 44.0 4.71e-01 94.7% 97.0%
4p56A00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.54 46.0 3.92e-01 91.1% 96.5%
2czlA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.54 46.0 4.80e-01 96.3% 97.7%
5i7iA00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.54 46.0 3.87e-01 91.1% 97.2%
4pe3A00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.54 46.0 3.89e-01 91.6% 95.6%
4n4uB00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.53 43.0 3.70e-01 84.7% 79.1%
4mncA00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.53 46.0 3.90e-01 91.6% 94.8%
2c7rA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 37.0 3.57e-01 100.0% 62.6%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4936256 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.81 51.0 6.26e-01 87.4% 95.2%
4950137 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.80 51.0 6.13e-01 88.4% 93.1%
3288208 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.79 41.0 5.55e-01 82.6% 93.3%
4956892 7523.1.1.43 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like 0.78 51.0 6.03e-01 93.7% 93.3%
4981136 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.76 56.0 6.30e-01 94.7% 95.3%
4052320 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.74 59.0 6.29e-01 96.3% 92.4%
5041426 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.73 60.0 6.38e-01 100.0% 94.7%
3204061 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.69 45.0 5.44e-01 85.3% 96.2%
3588804 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.69 33.0 4.57e-01 87.9% 90.5%
4946273 7587.1.1.0 a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases 0.67 37.0 4.74e-01 77.9% 91.8%
4137243 7523.1.1.10 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › HisG 0.67 43.0 5.12e-01 85.8% 93.8%
5080224 7523.1.1.10 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › HisG 0.66 42.0 5.10e-01 88.4% 93.8%
4665804 7523.1.1.10 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › HisG 0.66 40.0 4.84e-01 87.9% 90.4%
4992814 7523.1.1.22 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › ABC2_membrane_3 0.66 36.0 4.43e-01 95.3% 81.6%
4475639 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.65 43.0 5.03e-01 88.4% 93.3%
3959585 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.65 41.0 5.05e-01 87.9% 96.8%
4267068 7587.1.1.0 a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases 0.65 38.0 4.63e-01 78.4% 89.2%
4065313 7523.1.1.10 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › HisG 0.65 42.0 5.06e-01 87.9% 95.4%
4929568 7587.1.1.1 a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Inositol_P 0.65 37.0 4.62e-01 76.8% 91.2%
3286624 7587.1.1.0 a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases 0.64 38.0 4.65e-01 80.0% 88.8%
3164273 7587.1.1.1 a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Inositol_P 0.64 37.0 4.56e-01 77.9% 89.9%
3255301 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.63 38.0 4.72e-01 87.9% 96.5%
4974858 7523.1.1.22 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › ABC2_membrane_3 0.61 36.0 4.51e-01 87.4% 94.8%
4983503 7523.1.1.5 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PDT 0.60 30.0 4.16e-01 94.7% 95.8%
4949210 7523.1.1.43 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like 0.59 53.0 5.00e-01 93.7% 96.4%
4973913 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.58 53.0 4.93e-01 95.3% 97.8%
5080191 7523.1.1.22 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › ABC2_membrane_3 0.57 38.0 4.51e-01 95.8% 98.5%
4929329 7523.1.1.11 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › VitK2_biosynth 0.57 50.0 4.37e-01 93.2% 90.2%
5006148 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.56 49.0 4.55e-01 92.1% 91.9%
4952329 7523.1.1.22 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › ABC2_membrane_3 0.56 35.0 4.16e-01 84.7% 90.8%
4935549 7523.1.1.5 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PDT 0.56 32.0 4.15e-01 77.9% 97.3%
None 0.56 42.0 4.20e-01 77.9% 99.0%
3163591 304.13.1.1 a+b two layers › Alpha-beta plaits › Hypothetical protein VC0424 › Hypothetical protein VC0424 › RraB 0.56 26.0 3.08e-01 94.2% 61.8%
4928611 7523.1.1.27 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › NMT1_2 0.55 50.0 4.28e-01 100.0% 96.2%
3181481 7523.1.1.54 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › DUF3533 0.55 43.0 4.30e-01 97.9% 79.5%
4983300 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.55 45.0 4.65e-01 84.7% 99.4%
4438599 7523.1.1.11 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › VitK2_biosynth 0.55 48.0 4.27e-01 93.2% 91.3%
4939235 7523.1.1.11 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › VitK2_biosynth 0.54 47.0 4.87e-01 96.3% 97.2%
3388043 7523.1.1.11 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › VitK2_biosynth 0.54 48.0 4.90e-01 100.0% 96.8%
4993303 7523.1.1.11 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › VitK2_biosynth 0.54 46.0 4.79e-01 95.8% 97.1%
5008063 7523.1.1.11 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › VitK2_biosynth 0.54 46.0 4.27e-01 92.1% 93.9%
3839965 7523.1.1.11 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › VitK2_biosynth 0.54 49.0 4.80e-01 98.9% 98.0%
5012117 7523.1.1.11 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › VitK2_biosynth 0.53 48.0 4.23e-01 99.5% 97.9%
3989449 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.53 44.0 4.26e-01 85.8% 97.6%
5067616 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.52 39.0 4.27e-01 98.9% 96.0%
4423416 7523.1.1.16 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › DctP 0.52 45.0 3.92e-01 93.2% 97.6%
4215873 7523.1.1.16 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › DctP 0.52 44.0 4.13e-01 90.0% 96.1%
4215299 7523.1.1.11 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › VitK2_biosynth 0.51 46.0 4.45e-01 97.9% 97.2%
3968201 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.50 44.0 4.16e-01 92.6% 92.9%
D5 medium residues 685-727
PDB
Domain cluster: representative
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF07974.20 best EGF_2 30.0 7.30e-07 83.7% 100.0%
PF00008.34 EGF 23.5 7.40e-05 81.4% 87.5%
PF23106.2 EGF_Teneurin 26.7 6.70e-06 81.4% 90.0%
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fcsD04 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.87 57.0 5.89e-01 79.1% 72.5%
7lyuA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.85 63.0 4.01e-01 100.0% 17.9%
5l0rB00 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.79 63.0 6.54e-01 100.0% 94.9%
5uk5A01 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.77 55.0 5.96e-01 95.3% 100.0%
4d90A02 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.77 60.0 4.78e-01 100.0% 43.0%
2fd6A01 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.75 55.0 5.74e-01 97.7% 89.7%
1eslA00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.74 68.0 4.46e-01 100.0% 99.4%
1ccfA00 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.73 54.0 5.52e-01 100.0% 85.7%
5wb7E00 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.72 60.0 5.82e-01 100.0% 83.0%
2pe4A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.72 57.0 3.29e-01 88.4% 18.0%
1nqlB00 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.71 59.0 5.70e-01 97.7% 83.3%
2e26A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.70 64.0 3.98e-01 100.0% 99.5%
2e26A03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.69 64.0 4.01e-01 100.0% 97.4%
3tbdA01 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.69 48.0 3.85e-01 76.7% 37.6%
1tozA02 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.68 50.0 4.38e-01 100.0% 50.7%
2hoxA01 2.10.25.30 Mainly Beta › Ribbon › Laminin › EGF-like, alliinase 0.67 55.0 4.24e-01 100.0% 40.0%
1yo8A03 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.60 45.0 4.57e-01 97.7% 95.0%
3fbyA01 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.59 44.0 4.39e-01 100.0% 78.7%
4ay7A00 3.20.20.210 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.59 49.0 2.94e-01 100.0% 39.2%
2e4uA03 2.10.50.30 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › GPCR, family 3, nine cysteines domain 0.55 36.0 3.24e-01 76.7% 44.6%
1kloA01 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.53 40.0 3.84e-01 90.7% 100.0%
2dsyD00 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 35.0 3.05e-01 72.1% 58.0%
1ioxA00 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.50 39.0 3.81e-01 100.0% 82.0%
ECOD (89)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4001637 389.1.1.49 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_Teneurin 0.90 64.0 7.03e-01 74.4% 100.0%
3566798 389.1.1.9 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_2 0.88 65.0 7.18e-01 79.1% 97.1%
None 0.87 67.0 6.91e-01 97.7% 87.5%
4444437 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.87 65.0 7.09e-01 79.1% 97.1%
3501134 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.84 65.0 6.22e-01 100.0% 72.0%
3504416 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.83 65.0 6.70e-01 100.0% 90.0%
3520199 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.83 68.0 7.02e-01 100.0% 95.0%
3921456 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.82 64.0 6.06e-01 97.7% 72.0%
3557644 389.1.1.20 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › C8A_B_C6_EGF-like 0.82 60.0 6.20e-01 100.0% 85.0%
3502153 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.81 53.0 5.92e-01 72.1% 96.7%
3991001 389.1.1.9 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_2 0.81 61.0 6.65e-01 93.0% 100.0%
3535311 389.1.1.14 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › hEGF 0.81 61.0 6.68e-01 97.7% 100.0%
3499118 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.80 59.0 4.11e-01 100.0% 25.2%
3501192 389.1.1.49 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_Teneurin 0.80 65.0 6.21e-01 100.0% 76.0%
3405638 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.80 66.0 6.87e-01 100.0% 97.5%
3580646 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.80 64.0 6.66e-01 100.0% 95.0%
3528183 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.80 61.0 6.10e-01 100.0% 80.0%
3617369 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.80 64.0 6.67e-01 100.0% 92.5%
3887037 389.1.1.49 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_Teneurin 0.80 65.0 6.17e-01 88.4% 92.0%
3995046 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.79 61.0 6.35e-01 100.0% 90.0%
3514831 389.1.1.9 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_2 0.79 62.0 6.43e-01 97.7% 92.5%
4583578 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.79 64.0 6.09e-01 100.0% 76.0%
3232994 389.1.1.49 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_Teneurin 0.79 60.0 6.23e-01 100.0% 87.5%
3503858 389.1.1.14 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › hEGF 0.79 65.0 6.44e-01 100.0% 86.7%
3551187 389.1.1.49 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_Teneurin 0.79 72.0 7.08e-01 100.0% 97.8%
None 0.79 71.0 6.75e-01 100.0% 90.0%
3751388 389.1.1.49 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_Teneurin 0.78 67.0 6.58e-01 100.0% 88.9%
3488838 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.78 63.0 5.99e-01 100.0% 76.0%
3503847 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.78 63.0 5.43e-01 97.7% 58.5%
3416377 389.1.1.49 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_Teneurin 0.78 62.0 6.16e-01 95.3% 84.4%
3479890 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.78 62.0 6.43e-01 100.0% 95.0%
3218695 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.77 59.0 4.96e-01 88.4% 50.0%
3929937 389.1.1.9 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_2 0.77 59.0 5.82e-01 97.7% 80.0%
3999966 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.77 61.0 6.26e-01 100.0% 92.5%
3766059 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.77 64.0 6.67e-01 97.7% 100.0%
None 0.77 61.0 6.34e-01 100.0% 95.0%
3518608 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.77 64.0 6.36e-01 97.7% 88.9%
3909269 389.1.1.99 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › PF30999 0.76 64.0 6.38e-01 100.0% 88.9%
3503984 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.75 60.0 6.26e-01 95.3% 92.5%
3999106 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.75 65.0 6.47e-01 100.0% 93.3%
None 0.75 61.0 6.30e-01 100.0% 95.0%
3232565 389.1.1.49 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_Teneurin 0.74 61.0 5.84e-01 100.0% 78.0%
3482865 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.74 59.0 6.08e-01 100.0% 92.5%
3500185 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.74 61.0 6.32e-01 97.7% 100.0%
3570094 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.74 59.0 6.27e-01 97.7% 100.0%
3579827 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.74 64.0 6.17e-01 100.0% 90.0%
3503950 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.73 61.0 6.08e-01 100.0% 88.9%
3895635 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.73 63.0 6.25e-01 100.0% 91.1%
3542063 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.73 64.0 6.34e-01 97.7% 100.0%
3627848 389.1.1.49 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_Teneurin 0.72 64.0 6.11e-01 100.0% 92.0%
3885895 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.72 63.0 6.23e-01 97.7% 100.0%
3215331 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.71 62.0 5.33e-01 97.7% 63.1%
3225568 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.71 58.0 5.99e-01 95.3% 100.0%
3218151 389.1.1.49 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_Teneurin 0.70 62.0 5.89e-01 97.7% 98.0%
4024497 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.70 63.0 5.78e-01 100.0% 92.7%
3884618 10.32.1.225 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF31127 0.70 58.0 3.86e-01 95.3% 93.3%
3937730 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.70 60.0 5.56e-01 100.0% 76.4%
3499551 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.70 61.0 6.10e-01 100.0% 95.6%
3498934 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.69 61.0 6.07e-01 100.0% 95.6%
3478687 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.69 62.0 5.69e-01 100.0% 100.0%
3498024 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.69 61.0 5.65e-01 100.0% 94.5%
3228394 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.69 61.0 6.03e-01 97.7% 93.3%
3906442 389.1.1.2 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Laminin_EGF 0.69 57.0 5.07e-01 90.7% 68.3%
3246106 11.1.1.990 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EGF_Teneurin 0.69 61.0 4.12e-01 100.0% 92.9%
3211022 2002.1.1.68 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_56 0.69 62.0 3.57e-01 100.0% 22.6%
None 0.68 47.0 4.62e-01 97.7% 66.0%
170044 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.68 54.0 5.46e-01 100.0% 93.0%
None 0.67 44.0 4.75e-01 72.1% 96.7%
3491920 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.67 59.0 5.84e-01 97.7% 100.0%
3220853 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.67 59.0 5.27e-01 100.0% 83.3%
3517344 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.67 59.0 5.67e-01 100.0% 86.0%
3245701 389.1.1.9 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_2 0.66 55.0 5.35e-01 100.0% 92.0%
3896604 389.1.1.100 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › cEGF, EGF_3 0.65 49.0 5.09e-01 100.0% 92.5%
3232311 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.65 57.0 5.07e-01 97.7% 71.7%
3759989 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.64 56.0 5.54e-01 100.0% 95.6%
3572043 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.64 48.0 4.94e-01 100.0% 95.0%
3508511 389.1.1.16 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_3 0.63 49.0 4.86e-01 100.0% 86.7%
3244317 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.63 54.0 3.72e-01 100.0% 34.2%
3763365 389.1.1.16 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_3 0.63 46.0 4.39e-01 100.0% 67.3%
3627384 389.1.1.49 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_Teneurin 0.62 53.0 3.89e-01 97.7% 43.3%
3938845 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.62 43.0 4.43e-01 81.4% 94.3%
3630224 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.60 42.0 3.94e-01 88.4% 56.7%
3984750 375.1.1.295 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_11, DUF7828 0.55 39.0 2.98e-01 79.1% 52.0%
3932697 389.1.1.15 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_MSP1_1 0.55 40.0 4.13e-01 97.7% 97.5%
3570788 389.1.1.117 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › PF27506 0.54 40.0 4.11e-01 100.0% 97.5%
3778247 101.1.2.381 alpha arrays › HTH › HTH › winged helix domain › UBR1-like_wing 0.54 41.0 3.30e-01 93.0% 51.0%
3503876 101.1.2.381 alpha arrays › HTH › HTH › winged helix domain › UBR1-like_wing 0.54 42.0 3.34e-01 93.0% 48.0%
3511514 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.53 38.0 3.73e-01 97.7% 72.0%
3945997 309.1.2.0 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain 0.51 38.0 2.97e-01 95.3% 36.3%