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serpin

Euk-Vir

Hemileuca_sp._nucleopolyhedrovirus

serpin__YP_008378234__Hemileuca_sp._nucleopolyhedrovirus__1367203

Identity

Accession:
YP_008378234 ↗
Protein ID:
serpin
Kingdom:
euk

Quality

70.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 54-191_315-340
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00079.26 best Serpin 62.7 5.10e-17 97.6% 38.4%
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1attB02 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.92 88.0 7.36e-01 100.0% 72.1%
1as4A02 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.90 87.0 7.64e-01 100.0% 79.8%
1jrrA02 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.90 86.0 7.65e-01 100.0% 79.2%
2h4pA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.89 86.0 7.28e-01 100.0% 73.4%
3ndaA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.89 85.0 7.30e-01 100.0% 74.0%
2oayA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.88 73.0 6.96e-01 100.0% 75.5%
4r9iA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.87 83.0 6.78e-01 100.0% 64.4%
1ovaA02 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.87 83.0 7.18e-01 100.0% 81.3%
1mtpA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.86 83.0 7.28e-01 100.0% 73.7%
5inwA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.86 82.0 7.29e-01 100.0% 76.6%
1c8oA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.86 74.0 7.40e-01 100.0% 88.0%
2peeA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.86 82.0 7.03e-01 100.0% 72.2%
3le2A01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.86 81.0 7.06e-01 100.0% 76.7%
4p0fA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.85 82.0 7.26e-01 100.0% 77.9%
3pzfA02 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.85 80.0 7.53e-01 98.2% 92.1%
4if8B01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.84 80.0 6.65e-01 100.0% 65.7%
1wz9A01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.84 80.0 7.12e-01 100.0% 79.2%
4dy0B01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.84 80.0 7.50e-01 100.0% 88.1%
3f1sA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.84 79.0 6.90e-01 100.0% 74.9%
1i99I01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.83 79.0 7.46e-01 100.0% 88.5%
3ozqA02 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.83 77.0 7.55e-01 98.2% 91.5%
1db2A01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.83 78.0 7.37e-01 100.0% 87.6%
3stoA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.83 79.0 6.97e-01 100.0% 80.8%
1jmoA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.83 78.0 6.90e-01 100.0% 78.9%
4dteA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.82 77.0 7.32e-01 100.0% 87.4%
4au2B01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.81 77.0 6.87e-01 100.0% 76.5%
5c98A01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.81 76.0 6.80e-01 100.0% 80.5%
2r9yA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.81 76.0 6.82e-01 100.0% 76.3%
2wxwA02 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.80 75.0 6.83e-01 98.2% 90.3%
1imvA02 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.79 74.0 6.78e-01 100.0% 79.1%
3q6oA02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 28.0 3.45e-01 70.1% 72.8%
5fhiA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 26.0 3.61e-01 70.1% 89.5%
3kgkB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.56 29.0 3.65e-01 70.7% 81.6%
5gizA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.53 34.0 3.75e-01 72.6% 81.4%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3937095 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.90 87.0 6.43e-01 100.0% 73.0%
5068508 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.90 87.0 6.31e-01 100.0% 69.8%
4955122 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.90 87.0 6.46e-01 100.0% 73.4%
2332800 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.90 87.0 6.59e-01 100.0% 81.4%
3501867 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.89 85.0 4.98e-01 100.0% 24.7%
3615909 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.89 85.0 6.36e-01 100.0% 75.8%
141145 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.89 85.0 6.29e-01 100.0% 74.1%
154136 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.89 85.0 6.24e-01 100.0% 72.8%
3478193 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.89 72.0 6.29e-01 84.1% 61.8%
4785457 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.88 85.0 6.53e-01 100.0% 83.6%
3487083 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.88 84.0 6.16e-01 100.0% 72.3%
3489562 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.88 84.0 6.13e-01 100.0% 71.6%
3470034 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.88 84.0 6.19e-01 100.0% 74.2%
3388801 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.88 84.0 6.20e-01 100.0% 74.1%
3852230 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.88 84.0 5.96e-01 100.0% 66.1%
3862912 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.88 84.0 6.14e-01 100.0% 71.9%
3507066 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.88 83.0 6.13e-01 100.0% 71.9%
3547737 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.87 84.0 6.14e-01 100.0% 72.3%
3616512 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.87 83.0 6.15e-01 100.0% 71.3%
3390247 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.87 83.0 6.17e-01 100.0% 73.9%
3513192 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.87 83.0 5.51e-01 100.0% 48.7%
1684137 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.87 83.0 6.17e-01 100.0% 75.0%
3923459 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.87 83.0 6.11e-01 100.0% 72.1%
3443735 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.87 83.0 5.99e-01 100.0% 71.1%
3550875 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.87 83.0 6.09e-01 100.0% 70.6%
3900687 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.87 83.0 6.10e-01 100.0% 73.2%
3240710 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.87 83.0 6.20e-01 100.0% 74.7%
3925504 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.87 83.0 6.15e-01 100.0% 74.0%
2998442 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.87 82.0 6.17e-01 100.0% 77.0%
3998184 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.87 83.0 6.16e-01 100.0% 74.2%
3853539 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.87 83.0 6.03e-01 100.0% 69.7%
3862288 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.87 83.0 6.04e-01 100.0% 72.1%
4641764 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.87 82.0 6.04e-01 100.0% 72.4%
3843221 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.86 82.0 6.04e-01 100.0% 75.1%
3062973 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.86 82.0 6.38e-01 100.0% 86.6%
4768829 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.86 83.0 6.44e-01 100.0% 81.2%
2389142 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.86 82.0 6.18e-01 100.0% 75.9%
151337 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.86 83.0 5.95e-01 100.0% 69.1%
3884771 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.86 82.0 6.06e-01 100.0% 72.4%
2804034 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.86 82.0 6.05e-01 100.0% 71.1%
3923453 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.86 82.0 6.10e-01 100.0% 74.1%
3912871 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.86 82.0 6.03e-01 100.0% 72.3%
4783841 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.86 82.0 6.43e-01 100.0% 85.4%
2430490 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.86 82.0 6.06e-01 100.0% 74.1%
3404796 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.86 82.0 6.09e-01 100.0% 73.8%
3395896 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.86 82.0 6.06e-01 100.0% 73.9%
3432147 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.86 81.0 5.87e-01 100.0% 71.3%
138212 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.86 81.0 5.96e-01 100.0% 71.8%
986348 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.86 81.0 6.15e-01 100.0% 79.3%
1678306 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.86 81.0 6.07e-01 100.0% 73.8%
3224519 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.86 81.0 6.04e-01 100.0% 72.8%
1289420 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.85 82.0 6.08e-01 100.0% 72.1%
4458125 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.85 81.0 6.13e-01 100.0% 78.8%
3405995 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.85 81.0 5.93e-01 100.0% 71.9%
4058628 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.85 81.0 5.98e-01 100.0% 72.8%
4199509 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.85 81.0 6.14e-01 100.0% 78.9%
358183 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.85 81.0 6.03e-01 100.0% 74.1%
3389012 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.85 81.0 6.01e-01 100.0% 72.1%
3865089 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.85 81.0 6.07e-01 100.0% 76.7%
3749674 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.85 81.0 5.92e-01 100.0% 70.8%
86481 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.85 80.0 5.98e-01 100.0% 73.4%
3899510 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.85 81.0 5.96e-01 100.0% 72.4%
7646 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.85 80.0 5.97e-01 100.0% 73.7%
279848 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.85 80.0 5.98e-01 100.0% 75.3%
2998571 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.85 80.0 6.27e-01 100.0% 85.3%
3402750 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.85 80.0 5.98e-01 100.0% 73.7%
3553901 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.85 80.0 5.80e-01 100.0% 67.1%
3551728 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.84 80.0 5.96e-01 100.0% 74.9%
3395892 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.84 80.0 5.90e-01 100.0% 72.6%
4067074 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.84 80.0 5.91e-01 100.0% 73.9%
2077183 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.84 80.0 5.95e-01 100.0% 73.2%
3918321 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.84 79.0 5.86e-01 100.0% 71.0%
3630592 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.84 80.0 6.14e-01 100.0% 72.5%
1481964 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.84 79.0 6.00e-01 100.0% 76.8%
3642282 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.84 79.0 5.91e-01 100.0% 78.4%
3437937 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.83 79.0 5.82e-01 100.0% 73.1%
141146 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.83 79.0 5.93e-01 100.0% 73.9%
3551648 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.83 79.0 5.83e-01 100.0% 71.4%
366580 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.83 79.0 5.82e-01 100.0% 71.2%
3911919 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.83 79.0 5.86e-01 100.0% 73.6%
364017 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.83 79.0 5.86e-01 100.0% 72.1%
3813233 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.83 74.0 5.47e-01 93.3% 71.3%
2803312 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.83 78.0 5.81e-01 100.0% 72.8%
3872729 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.83 78.0 5.88e-01 100.0% 74.2%
86478 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.83 78.0 5.63e-01 100.0% 66.2%
3911315 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.82 78.0 5.83e-01 100.0% 73.0%
3403800 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.82 78.0 5.78e-01 100.0% 71.8%
3770064 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.82 78.0 5.78e-01 100.0% 73.1%
3409432 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.82 77.0 5.71e-01 100.0% 70.3%
3640458 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.82 77.0 5.60e-01 100.0% 72.3%
3619206 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.81 78.0 5.67e-01 100.0% 70.3%
3391421 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.81 76.0 5.67e-01 100.0% 72.9%
3841359 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.81 76.0 5.71e-01 100.0% 74.1%
1885705 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.81 76.0 5.75e-01 100.0% 76.6%
3394128 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.80 77.0 5.72e-01 100.0% 75.3%
2650033 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.80 76.0 5.67e-01 100.0% 73.2%
7648 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.80 75.0 5.61e-01 100.0% 72.0%
3891226 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.79 75.0 5.63e-01 100.0% 73.7%
3214133 4059.1.1.0 a+b complex topology › Serpins › Serpins › Serpins 0.74 70.0 5.26e-01 100.0% 71.4%
D2 high residues 198-306_357-407
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00079.26 best Serpin 31.4 1.70e-07 68.1% 19.2%
PF00079.26 Serpin 37.2 2.90e-09 53.8% 14.3%