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serpin
Euk-VirAkhmeta_virus
serpin__YP_010085650__Akhmeta_virus__2200830
Identity
- Accession:
- YP_010085650 ↗
- Protein ID:
- serpin
- Kingdom:
- euk
Quality
83.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Orthopoxvirus›
Orthopoxvirus_akhmetapox
TaxID: 2200830
Cluster
View cluster (68 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-137_243-306
Domain cluster:
rep: Serpin_1__YP_009408115__Eptesipox_virus__1329402__D1-137_237-300
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00079.26 best | Serpin | 84.8 | 9.90e-24 | 69.2% | 42.2% |
| PF00079.26 | Serpin | 52.1 | 8.90e-14 | 32.8% | 16.5% |
D2
high
residues 146-239
Domain cluster:
rep: Filtrate_w_scaffold_3_prodigal-single.1__X__X__00332__D264-353_432-459
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00079.26 best | Serpin | 71.4 | 1.20e-19 | 100.0% | 25.4% |
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1f0cA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 1.00 | 98.0 | 8.83e-01 | 100.0% | 79.7% |
| 1jmoA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.96 | 90.0 | 7.41e-01 | 100.0% | 60.7% |
| 3ozqA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.95 | 87.0 | 6.95e-01 | 100.0% | 53.9% |
| 3ndaA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.95 | 90.0 | 7.78e-01 | 100.0% | 69.7% |
| 3f1sA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.94 | 88.0 | 7.25e-01 | 100.0% | 60.7% |
| 1i99I02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.93 | 89.0 | 8.09e-01 | 100.0% | 79.5% |
| 3zhaQ02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.93 | 87.0 | 7.61e-01 | 100.0% | 70.2% |
| 5inwA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.93 | 87.0 | 8.25e-01 | 98.9% | 85.2% |
| 1qmnA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.92 | 89.0 | 7.56e-01 | 100.0% | 77.9% |
| 4zk3A02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.92 | 89.0 | 7.84e-01 | 100.0% | 78.7% |
| 4dy0B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.92 | 88.0 | 7.74e-01 | 100.0% | 75.0% |
| 1imvA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.91 | 86.0 | 6.83e-01 | 100.0% | 55.0% |
| 3f02B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.90 | 86.0 | 8.39e-01 | 100.0% | 96.0% |
| 2v95A02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.90 | 86.0 | 7.56e-01 | 100.0% | 95.3% |
| 1hp7A01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.89 | 81.0 | 8.09e-01 | 100.0% | 94.7% |
| 5c98B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.86 | 82.0 | 7.22e-01 | 100.0% | 79.1% |
| 5ncsA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.86 | 82.0 | 7.00e-01 | 100.0% | 80.6% |
| 2r9yA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.85 | 78.0 | 6.60e-01 | 100.0% | 62.3% |
| 2wxwA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.85 | 78.0 | 6.44e-01 | 100.0% | 58.2% |
| 1jrrA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.84 | 80.0 | 7.21e-01 | 100.0% | 80.3% |
| 4r9iA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.84 | 77.0 | 7.57e-01 | 100.0% | 93.0% |
| 2peeB02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.83 | 79.0 | 6.92e-01 | 100.0% | 79.4% |
| 2oayA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.82 | 76.0 | 6.00e-01 | 100.0% | 51.7% |
| 1lj5A02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.82 | 77.0 | 6.37e-01 | 100.0% | 63.0% |
| 7vljA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.78 | 66.0 | 6.70e-01 | 100.0% | 92.5% |
| 1h91A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 42.0 | 3.41e-01 | 79.8% | 62.8% |
| 3lygA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 38.0 | 3.54e-01 | 72.3% | 78.3% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 37.0 | 3.26e-01 | 73.4% | 87.4% |
| 2qggA02 | 2.30.30.240 | Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain | 0.52 | 34.0 | 3.61e-01 | 93.6% | 75.9% |
| 4bwgD00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 38.0 | 3.79e-01 | 77.7% | 88.7% |
| 2aujD03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.51 | 31.0 | 3.68e-01 | 91.5% | 91.9% |
| 1sqiA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 41.0 | 3.43e-01 | 88.3% | 84.4% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4767909 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.99 | 96.0 | 6.40e-01 | 100.0% | 31.6% |
| 3553901 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.97 | 91.0 | 5.68e-01 | 100.0% | 22.0% |
| 86478 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.96 | 90.0 | 5.57e-01 | 100.0% | 21.7% |
| 141146 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.95 | 87.0 | 5.57e-01 | 100.0% | 24.5% |
| 3749674 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.95 | 90.0 | 5.65e-01 | 100.0% | 23.6% |
| 3865089 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.95 | 90.0 | 5.74e-01 | 100.0% | 25.6% |
| 3551648 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.95 | 88.0 | 5.60e-01 | 100.0% | 23.7% |
| 4647347 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.95 | 86.0 | 5.45e-01 | 100.0% | 22.6% |
| 3891226 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.95 | 89.0 | 5.66e-01 | 100.0% | 24.9% |
| 2803312 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.95 | 90.0 | 5.67e-01 | 100.0% | 24.1% |
| 3547439 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.94 | 87.0 | 6.00e-01 | 100.0% | 34.0% |
| 3911315 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.94 | 88.0 | 5.61e-01 | 100.0% | 24.6% |
| 3501867 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.94 | 88.0 | 4.81e-01 | 100.0% | 8.1% |
| 366580 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.94 | 88.0 | 5.55e-01 | 100.0% | 23.6% |
| 2998571 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.93 | 85.0 | 5.60e-01 | 96.8% | 27.8% |
| 4783841 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.93 | 88.0 | 5.85e-01 | 100.0% | 29.6% |
| 2332800 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.93 | 86.0 | 5.63e-01 | 100.0% | 26.9% |
| 3998184 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.93 | 86.0 | 5.52e-01 | 100.0% | 24.7% |
| 3224519 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.92 | 85.0 | 5.45e-01 | 100.0% | 24.3% |
| 3547737 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.92 | 88.0 | 5.60e-01 | 100.0% | 24.5% |
| 4785457 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.92 | 85.0 | 5.57e-01 | 100.0% | 27.8% |
| 3391421 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.92 | 87.0 | 5.56e-01 | 100.0% | 24.5% |
| 3062973 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.92 | 84.0 | 5.56e-01 | 100.0% | 28.0% |
| 2650033 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.91 | 86.0 | 5.51e-01 | 100.0% | 25.2% |
| 3900687 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.91 | 87.0 | 5.55e-01 | 100.0% | 25.3% |
| 7648 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.91 | 86.0 | 5.48e-01 | 100.0% | 24.8% |
| 3911919 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.91 | 86.0 | 5.51e-01 | 100.0% | 25.6% |
| 2430490 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.90 | 86.0 | 5.49e-01 | 100.0% | 25.3% |
| 3621630 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.90 | 85.0 | 5.48e-01 | 100.0% | 25.8% |
| 5068508 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.89 | 84.0 | 5.34e-01 | 100.0% | 23.6% |
| 4768540 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.89 | 84.0 | 6.02e-01 | 100.0% | 40.2% |
| 3917472 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.88 | 83.0 | 5.31e-01 | 100.0% | 25.3% |
| 154136 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.88 | 83.0 | 5.31e-01 | 100.0% | 25.1% |
| 3455755 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.87 | 83.0 | 5.53e-01 | 100.0% | 33.5% |
| 3777341 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.86 | 79.0 | 5.05e-01 | 100.0% | 23.6% |
| 166524 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.85 | 78.0 | 5.07e-01 | 100.0% | 24.9% |
| 3626321 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.57 | 30.0 | 3.82e-01 | 75.5% | 87.3% |
| 5010618 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 36.0 | 4.22e-01 | 100.0% | 96.8% |
| 1141950 | 3449.1.1.1 ↗ | a+b two layers › Cpn0803 › Cpn0803 › Cpn0803 › CT_584-like | 0.55 | 29.0 | 2.38e-01 | 75.5% | 27.4% |
| 4857588 | 219.1.1.6 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 | 0.54 | 44.0 | 3.37e-01 | 91.5% | 73.1% |
| 4394739 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.54 | 33.0 | 3.70e-01 | 75.5% | 81.4% |
| 3315568 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.53 | 32.0 | 3.69e-01 | 71.3% | 82.9% |
| 4879890 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 24.0 | 2.67e-01 | 100.0% | 47.4% |
| 3596303 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 33.0 | 3.67e-01 | 75.5% | 82.7% |