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serpin_family_protein

Euk-Vir

Penguinpox_virus

serpin_family_protein__YP_009046042__Penguinpox_virus__648998

Identity

Accession:
YP_009046042 ↗
Protein ID:
serpin_family_protein
Kingdom:
euk

Quality

87.3 mean pLDDT

Cluster

View cluster (68 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-125_234-307
PDB
Domain cluster: rep: Serpin_1__YP_009408115__Eptesipox_virus__1329402__D1-137_237-300
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1as4A02 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.93 78.0 7.47e-01 86.3% 99.6%
2h4pA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.92 83.0 7.58e-01 93.4% 97.6%
4p0fA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.92 77.0 7.39e-01 86.3% 97.7%
5inwA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.91 76.0 7.28e-01 86.3% 96.8%
3ndaA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.90 82.0 7.51e-01 93.9% 98.3%
1jrrA02 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.90 75.0 7.22e-01 86.3% 99.1%
1mtpA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.89 80.0 7.57e-01 93.4% 98.7%
1jmoA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.89 73.0 6.96e-01 85.3% 97.4%
1wz9A01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.89 74.0 7.07e-01 85.8% 98.6%
1ovaA02 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.88 72.0 6.77e-01 85.3% 99.1%
3le2A01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.87 72.0 6.75e-01 86.3% 97.0%
2r9yA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.87 72.0 6.96e-01 86.3% 95.9%
4dy0B01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.86 61.0 6.20e-01 71.6% 94.8%
3pzfA02 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.85 60.0 6.15e-01 71.6% 100.0%
1imvA02 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.85 69.0 6.82e-01 83.8% 97.6%
1i99I01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.85 60.0 6.10e-01 71.6% 94.8%
5c98A01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.84 70.0 6.74e-01 86.3% 98.6%
4au2B01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.84 71.0 6.80e-01 87.3% 95.5%
3ozqA02 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.82 57.0 6.02e-01 70.1% 100.0%
4if8B01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.79 76.0 6.73e-01 100.0% 95.1%
2oayA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.76 60.0 6.13e-01 80.2% 91.0%
1fm4A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 27.0 3.01e-01 94.4% 58.5%
3ddvB01 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.53 34.0 4.00e-01 95.9% 90.5%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 26.0 2.85e-01 94.9% 55.2%
2d4rA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 25.0 2.85e-01 93.9% 58.9%
2vneA01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 26.0 2.82e-01 94.4% 56.4%
6ka3A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 26.0 3.01e-01 94.4% 64.6%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2332800 4059.1.1.0 ↗ a+b complex topology › Serpins › Serpins › Serpins 0.93 86.0 6.90e-01 94.4% 98.8%
1289420 4059.1.1.0 ↗ a+b complex topology › Serpins › Serpins › Serpins 0.92 85.0 6.64e-01 94.9% 88.6%
4783841 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.91 77.0 6.40e-01 86.8% 100.0%
4785457 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.91 82.0 6.69e-01 92.4% 100.0%
4768829 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.89 80.0 6.63e-01 93.4% 99.1%
986348 4059.1.1.0 ↗ a+b complex topology › Serpins › Serpins › Serpins 0.88 75.0 5.99e-01 87.3% 92.1%
4199509 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.87 74.0 5.98e-01 88.8% 95.1%
154136 4059.1.1.0 ↗ a+b complex topology › Serpins › Serpins › Serpins 0.86 83.0 6.44e-01 100.0% 90.3%
141145 4059.1.1.0 ↗ a+b complex topology › Serpins › Serpins › Serpins 0.85 82.0 6.41e-01 100.0% 98.9%
4539644 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.83 72.0 5.77e-01 89.8% 96.9%
3547737 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.80 77.0 5.99e-01 100.0% 97.1%
3957979 4059.1.1.0 ↗ a+b complex topology › Serpins › Serpins › Serpins 0.80 73.0 6.10e-01 94.9% 96.2%
3551648 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.80 76.0 5.94e-01 100.0% 96.4%
3862288 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.79 76.0 5.87e-01 100.0% 97.2%
141146 4059.1.1.0 ↗ a+b complex topology › Serpins › Serpins › Serpins 0.79 75.0 5.96e-01 100.0% 97.8%
3551728 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.78 75.0 5.89e-01 100.0% 99.2%
154755 4059.1.1.0 ↗ a+b complex topology › Serpins › Serpins › Serpins 0.78 75.0 5.85e-01 100.0% 96.0%
3437937 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.78 74.0 5.71e-01 99.0% 100.0%
358183 4059.1.1.0 ↗ a+b complex topology › Serpins › Serpins › Serpins 0.78 74.0 5.86e-01 100.0% 99.5%
3911315 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.78 74.0 5.84e-01 100.0% 98.1%
7646 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.77 74.0 5.81e-01 100.0% 97.9%
86481 4059.1.1.0 ↗ a+b complex topology › Serpins › Serpins › Serpins 0.77 74.0 5.80e-01 100.0% 97.9%
3395896 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.77 73.0 5.75e-01 100.0% 98.1%
1883933 4059.1.1.0 ↗ a+b complex topology › Serpins › Serpins › Serpins 0.76 73.0 5.71e-01 100.0% 94.7%
364017 4059.1.1.0 ↗ a+b complex topology › Serpins › Serpins › Serpins 0.76 73.0 5.69e-01 100.0% 98.1%
86484 4059.1.1.0 ↗ a+b complex topology › Serpins › Serpins › Serpins 0.76 72.0 5.84e-01 100.0% 97.7%
3621630 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.71 68.0 5.42e-01 100.0% 98.9%
3407660 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.70 67.0 5.52e-01 100.0% 95.5%
3402664 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.67 63.0 5.10e-01 100.0% 97.4%
3290314 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.57 27.0 2.92e-01 94.4% 50.3%
3962288 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.57 25.0 3.07e-01 82.7% 60.8%
5040587 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.55 26.0 2.93e-01 94.9% 56.1%
3953711 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.54 26.0 2.97e-01 93.9% 60.7%
3953672 331.3.1.5 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.53 26.0 2.89e-01 93.9% 56.8%
4117472 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.52 26.0 2.88e-01 94.4% 56.2%
144571 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.52 26.0 2.84e-01 94.9% 54.2%
4137586 331.3.1.1 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Bet_v_1 0.52 26.0 2.91e-01 93.9% 60.0%
3313814 331.3.1.5 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.51 25.0 2.68e-01 93.9% 50.9%
3998596 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 26.0 3.25e-01 83.2% 78.3%
D2 high residues 138-231_314-332
PDB
Domain cluster: rep: serpin_family_protein__YP_009447959__Flamingopox_virus_FGPVKD09__2059380__D135-230