small_capsid_protein

Euk-Vir

Equid_alphaherpesvirus_3

small_capsid_protein__YP_009054928__Equid_alphaherpesvirus_3__80341

Identity

71.0 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Varicellovirus› Equid_alphaherpesvirus_3

TaxID: 80341

View cluster (28 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-76

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1iwpB00	3.40.50.10150	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › B12-dependent dehydatase associated subunit	0.59	42.0	3.19e-01	76.8%	74.5%
2b3fC02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.50	42.0	3.01e-01	91.3%	68.5%
1paqA00	1.25.40.180	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.50	40.0	3.21e-01	92.8%	57.8%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3587256	633.22.1.0 ↗	alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR)	0.64	47.0	3.45e-01	78.3%	73.5%
3875898	109.4.1.33 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT	0.58	48.0	3.00e-01	97.1%	41.2%