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small_t_antigen
Euk-VirBat_polyomavirus_5a
small_t_antigen__YP_009129309__Bat_polyomavirus_5a__1623687
Identity
- Accession:
- YP_009129309 ↗
- Protein ID:
- small_t_antigen
- Kingdom:
- euk
Quality
83.7
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Sepolyvirales›
Polyomaviridae›
Alphapolyomavirus›
Bat_polyomavirus_5a
TaxID: 1623687
Cluster
View cluster (116 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-78
Domain cluster:
rep: small_T_antigen__YP_007346980__Betapolyomavirus_ptedavyi__1891773__D7-77
D2
high
residues 87-135
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02380.21 best | Papo_T_antigen | 31.3 | 2.60e-07 | 100.0% | 46.2% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ob9A00 | 3.60.150.10 | Alpha Beta › 4-Layer Sandwich › Chorismate synthase, AroC fold › Chorismate synthase AroC | 0.58 | 53.0 | 3.17e-01 | 100.0% | 40.3% |
| 2rt6A00 | 1.20.1270.340 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.53 | 47.0 | 3.74e-01 | 100.0% | 93.9% |