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sod
Euk-VirHemileuca_sp._nucleopolyhedrovirus
sod__YP_008378312__Hemileuca_sp._nucleopolyhedrovirus__1367203
Identity
- Accession:
- YP_008378312 ↗
- Protein ID:
- sod
- Kingdom:
- euk
Quality
90.5
mean pLDDT
Taxonomy
TaxID: 1367203
Cluster
View cluster (67 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-41_94-145
Domain cluster:
rep: sod__YP_009505989__Clostera_anastomosis_granulovirus_B__1986290__D1-32_94-151
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00080.26 best | Sod_Cu | 43.1 | 7.70e-11 | 57.0% | 35.3% |
D2
medium
residues 42-93
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00080.26 best | Sod_Cu | 66.6 | 4.40e-18 | 100.0% | 34.6% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b4tA00 | 2.60.40.200 | Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain | 0.93 | 85.0 | 5.85e-01 | 100.0% | 33.3% |
| 4u4iA00 | 2.60.40.200 | Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain | 0.88 | 63.0 | 4.60e-01 | 100.0% | 31.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4201293 | 11.1.3.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like › Sod_Cu | 0.96 | 90.0 | 6.12e-01 | 100.0% | 33.3% |
| 3798880 | 11.1.3.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like | 0.94 | 86.0 | 5.87e-01 | 100.0% | 32.3% |
| 3407979 | 11.1.3.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like › Sod_Cu | 0.92 | 86.0 | 5.72e-01 | 100.0% | 30.3% |
| 3995492 | 11.1.3.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like › Sod_Cu | 0.92 | 83.0 | 5.67e-01 | 100.0% | 30.9% |
| 3927206 | 11.1.3.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like › Sod_Cu | 0.91 | 83.0 | 5.64e-01 | 100.0% | 31.1% |
| 3492090 | 11.1.3.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like › Sod_Cu | 0.90 | 81.0 | 5.67e-01 | 100.0% | 34.0% |