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sod
Euk-VirClostera_anastomosis_granulovirus_B
sod__YP_009505989__Clostera_anastomosis_granulovirus_B__1986290
Identity
- Accession:
- YP_009505989 ↗
- Protein ID:
- sod
- Kingdom:
- euk
Quality
90.3
mean pLDDT
Taxonomy
TaxID: 1986290
Cluster
View cluster (67 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-32_94-151
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00080.26 best | Sod_Cu | 52.0 | 1.40e-13 | 71.1% | 39.9% |
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b4tA00 | 2.60.40.200 | Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain | 0.93 | 89.0 | 7.22e-01 | 100.0% | 100.0% |
| 2jlpB00 | 2.60.40.200 | Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain | 0.91 | 86.0 | 6.83e-01 | 100.0% | 94.0% |
| 4bd4A00 | 2.60.40.200 | Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain | 0.82 | 78.0 | 7.22e-01 | 98.9% | 99.1% |
| 6jt6A00 | 2.60.40.1210 | Mainly Beta › Sandwich › Immunoglobulin-like › Cellobiose dehydrogenase, cytochrome domain | 0.60 | 52.0 | 4.11e-01 | 98.9% | 82.6% |
| 4qi3A00 | 2.60.40.1210 | Mainly Beta › Sandwich › Immunoglobulin-like › Cellobiose dehydrogenase, cytochrome domain | 0.59 | 51.0 | 4.01e-01 | 100.0% | 83.1% |
| 2zutA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 32.0 | 3.67e-01 | 92.2% | 86.4% |
| 2qq6A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 37.0 | 3.40e-01 | 70.0% | 57.8% |
| 2vz8A04 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.52 | 41.0 | 2.97e-01 | 83.3% | 94.1% |
| 1rl1A00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 32.0 | 3.27e-01 | 86.7% | 60.9% |
| 2wsuA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 46.0 | 3.98e-01 | 100.0% | 85.6% |
| 6xofA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 44.0 | 3.27e-01 | 100.0% | 43.1% |
| 4dq2A03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 27.0 | 3.53e-01 | 95.6% | 100.0% |
| 1umzA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 43.0 | 3.20e-01 | 100.0% | 39.7% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4201293 | 11.1.3.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like › Sod_Cu | 0.95 | 92.0 | 7.42e-01 | 100.0% | 98.0% |
| 3925836 | 11.1.3.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like › Sod_Cu | 0.93 | 89.0 | 7.02e-01 | 100.0% | 92.1% |
| 3750210 | 11.1.3.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like › Sod_Cu | 0.92 | 88.0 | 6.69e-01 | 100.0% | 84.3% |
| 4609815 | 11.1.3.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like › Sod_Cu | 0.90 | 86.0 | 7.01e-01 | 100.0% | 100.0% |
| 3927206 | 11.1.3.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like › Sod_Cu | 0.87 | 82.0 | 6.56e-01 | 100.0% | 96.3% |
| 3407979 | 11.1.3.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like › Sod_Cu | 0.87 | 83.0 | 6.42e-01 | 100.0% | 90.9% |
| 3492090 | 11.1.3.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like › Sod_Cu | 0.84 | 78.0 | 6.44e-01 | 98.9% | 99.3% |
| 3614414 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 32.0 | 3.73e-01 | 100.0% | 91.4% |
| 4121572 | 5.1.4.14 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N | 0.53 | 42.0 | 2.87e-01 | 88.9% | 36.6% |
| 3621363 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.52 | 43.0 | 3.12e-01 | 94.4% | 70.2% |
| 3533318 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.51 | 28.0 | 3.42e-01 | 98.9% | 92.0% |
| 3416871 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.51 | 45.0 | 3.65e-01 | 100.0% | 52.4% |