structural_nucleocapsid_protein

Euk-Vir

Gamboa_virus

structural_nucleocapsid_protein__YP_009507873__Gamboa_virus__35313

Identity

80.9 mean pLDDT

Orthornavirae› Negarnaviricota› Bunyaviricetes› Elliovirales› Peribunyaviridae› Orthobunyavirus› Gamboa_virus

TaxID: 35313

View cluster (71 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 17-152

PDB

Domain cluster: rep: nucleoprotein__YP_010086207__Caimito_virus__2572766__D12-126

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00952.24 best	Bunya_nucleocap	179.4	1.20e-52	100.0%	60.1%

D2 medium residues 153-238

PDB

Domain cluster: rep: nucleocapsid__YP_009666971__Melao_virus__35515__D139-235

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00952.24 best	Bunya_nucleocap	78.9	6.30e-22	95.3%	35.5%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3zlaA02	1.10.472.180	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Bunyavirus nucleocapsid (N) protein, C-terminal domain	0.89	75.0	7.05e-01	97.7%	74.5%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1014397	3644.1.1.2 ↗	alpha complex topology › Leanyer virus nucleoprotein-related › Leanyer virus nucleoprotein-related › Leanyer virus nucleoprotein-related › Bunya_nucleocap	0.93	69.0	4.95e-01	76.7%	30.6%
4955678	7516.1.1.2 ↗	a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2	0.62	43.0	3.01e-01	70.9%	23.3%
3859366	574.1.1.1 ↗	alpha bundles › Surp module (SWAP domain) › Surp module (SWAP domain) › Surp module (SWAP domain) › Surp	0.60	40.0	4.47e-01	72.1%	96.7%
4113994	7577.1.1.1 ↗	a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2	0.54	45.0	2.83e-01	97.7%	96.9%