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structural_polyprotein

Euk-Vir

Bastrovirus_VietNam_Porcine_17489_85

structural_polyprotein__YP_009333168__Bastrovirus_VietNam_Porcine_17489_85__1906173

Identity

Accession:
YP_009333168 ↗
Protein ID:
structural_polyprotein
Kingdom:
euk

Quality

57.8 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Stelpaviricetes› Stellavirales› Astroviridae› Bastrovirus/VietNam/Porcine/17489_85

TaxID: 1906173

Cluster

View cluster (25 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 53-243
PDB
Domain cluster: rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF03115.21 best Astro_capsid_N 129.6 1.80e-37 94.2% 72.3%
PF03014.21 SP2 30.2 4.90e-07 80.6% 80.5%
CATH (86)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ewnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.93 87.0 8.95e-01 95.8% 100.0%
1opoC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.90 76.0 8.18e-01 95.3% 100.0%
3zxaC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.90 75.0 7.54e-01 95.8% 86.2%
2ztnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.90 85.0 8.58e-01 98.4% 100.0%
4rft000 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.88 73.0 7.93e-01 96.3% 100.0%
6mrmC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.86 72.0 7.63e-01 93.2% 97.0%
4llfD01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.85 74.0 7.66e-01 96.3% 95.5%
4nwvA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.85 73.0 7.43e-01 95.8% 91.3%
2izwC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.84 74.0 7.23e-01 97.9% 84.6%
5yl1A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.83 75.0 7.72e-01 93.2% 100.0%
3napB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.81 72.0 6.49e-01 96.9% 71.3%
5j98B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 76.0 6.76e-01 100.0% 83.8%
1fmd200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 70.0 6.69e-01 97.9% 79.8%
4qpiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 68.0 6.54e-01 95.8% 78.3%
2tbvA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 75.0 6.36e-01 97.9% 66.1%
4qpiC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 73.0 6.64e-01 97.4% 78.9%
1smvC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 74.0 6.98e-01 97.9% 88.7%
1c8nC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 74.0 6.98e-01 97.4% 86.8%
5mqcB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 69.0 6.39e-01 95.8% 75.3%
2gh8A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 66.0 6.49e-01 94.8% 83.2%
5aooC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 69.0 6.58e-01 96.3% 80.9%
3napC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 72.0 6.28e-01 97.4% 77.9%
1ihmB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 73.0 6.97e-01 100.0% 86.4%
5mqcC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 71.0 6.31e-01 96.3% 76.9%
1b35C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 71.0 6.17e-01 97.4% 72.0%
1b35B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 71.0 6.39e-01 96.9% 74.9%
1f2nC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 72.0 6.95e-01 97.9% 88.2%
1ng0C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 72.0 6.83e-01 97.4% 88.1%
4fy1100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 71.0 6.76e-01 96.9% 85.3%
1tme200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 73.0 6.51e-01 100.0% 86.7%
2ws9300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 70.0 6.58e-01 96.9% 81.9%
1e57B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 63.0 6.50e-01 98.4% 91.3%
3jb8A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 68.0 6.99e-01 96.3% 98.4%
5c8cB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 71.0 6.07e-01 99.0% 73.1%
1auyB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 64.0 6.45e-01 100.0% 89.4%
3cjiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 68.0 6.33e-01 96.9% 81.9%
5aca300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 67.0 6.37e-01 96.9% 81.1%
2ws9201 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 68.0 6.76e-01 96.3% 92.8%
3vbhC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 68.0 6.28e-01 97.4% 81.0%
1a6cA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 62.0 5.02e-01 94.2% 48.0%
1tme300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 68.0 6.33e-01 97.4% 81.3%
2y26A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 63.0 5.11e-01 93.7% 50.0%
1pgw200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 67.0 5.36e-01 97.4% 52.1%
5k0uB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 67.0 6.25e-01 97.4% 80.0%
3jb4C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 65.0 6.02e-01 97.4% 74.7%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.73 48.0 5.44e-01 92.7% 86.8%
1a6cA02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 58.0 6.18e-01 96.3% 98.2%
1f8vC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 65.0 5.45e-01 97.4% 79.1%
6jhsA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 65.0 5.78e-01 97.9% 93.1%
1novA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 64.0 5.41e-01 97.4% 78.0%
2y26A02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 55.0 5.94e-01 96.3% 98.8%
6sk6A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 61.0 5.41e-01 97.4% 75.5%
1mec100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 60.0 5.30e-01 95.8% 81.8%
2ws9100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 61.0 5.56e-01 96.9% 80.9%
1wcdJ01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 60.0 5.26e-01 96.9% 73.7%
4qc8A00 2.170.30.10 Mainly Beta › Beta Complex › Empty Capsid Viral Protein 2 › Parvovirus coat protein VP1/VP2 0.66 60.0 4.42e-01 97.9% 95.2%
1b35A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 59.0 5.35e-01 96.9% 81.5%
3j4uH00 2.60.120.1110 Mainly Beta › Sandwich › Jelly Rolls › 0.63 41.0 4.78e-01 87.4% 89.3%
4lr4A02 2.60.120.1430 Mainly Beta › Sandwich › Jelly Rolls › 0.63 48.0 5.10e-01 96.3% 90.5%
3pl0B00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.61 39.0 3.55e-01 97.9% 46.8%
4qkbA00 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.61 35.0 3.60e-01 90.1% 56.1%
1yi9A01 2.60.120.310 Mainly Beta › Sandwich › Jelly Rolls › Copper type II, ascorbate-dependent monooxygenase, N-terminal domain 0.61 43.0 4.73e-01 90.6% 89.1%
3napA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.60 54.0 4.87e-01 97.4% 71.6%
3s7vC00 2.60.175.10 Mainly Beta › Sandwich › Polyomavirus Vp1; Chain A › Capsid protein VP1,Polyomavirus 0.60 53.0 4.73e-01 95.3% 97.8%
6mkbA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.60 48.0 5.14e-01 92.1% 99.4%
1ca1A02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.59 33.0 3.99e-01 90.1% 83.3%
4msvA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.58 41.0 4.75e-01 90.6% 100.0%
2yc2A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 40.0 4.70e-01 88.0% 100.0%
4mxwD00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.58 40.0 4.64e-01 91.1% 100.0%
2w47A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 39.0 4.50e-01 90.1% 96.3%
2c9aA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 45.0 4.88e-01 89.5% 96.9%
1pmhX00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 49.0 5.06e-01 91.6% 98.4%
3w5mA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 38.0 3.77e-01 89.5% 64.0%
5x7qA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 37.0 4.41e-01 86.4% 100.0%
2v72A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 39.0 4.43e-01 89.0% 99.3%
6oauA02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.55 29.0 3.51e-01 71.2% 77.0%
3eb7A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 40.0 4.33e-01 91.1% 88.4%
6ovbA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 38.0 4.23e-01 91.6% 89.0%
3hbzA02 2.60.120.890 Mainly Beta › Sandwich › Jelly Rolls › BT2081, beta-jelly-roll domain 0.54 45.0 4.16e-01 89.0% 99.2%
2vovA00 2.60.120.1220 Mainly Beta › Sandwich › Jelly Rolls › 0.54 44.0 3.82e-01 86.4% 85.9%
2orzA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 41.0 4.47e-01 95.3% 97.5%
1pgsA02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 4.65e-01 97.4% 99.4%
2bw8A00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.51 43.0 4.06e-01 89.0% 92.9%
1nlrA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.51 42.0 4.04e-01 89.0% 93.7%
3hwjA00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.51 38.0 4.25e-01 89.0% 100.0%
4pt6A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 39.0 4.28e-01 89.5% 99.4%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1877512 10.2.1.32 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Astro_capsid_N 0.92 86.0 8.78e-01 95.8% 100.0%
1724852 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.90 76.0 8.20e-01 95.8% 100.0%
1693524 10.2.1.49 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN 0.90 74.0 7.65e-01 95.8% 89.5%
146646 10.2.1.30 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › SP2 0.89 83.0 8.27e-01 95.8% 94.8%
2539045 10.2.1.12 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Luteo_coat 0.87 64.0 7.34e-01 94.2% 97.9%
2542980 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.86 72.0 7.24e-01 93.7% 86.4%
1693522 10.2.1.49 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN 0.85 73.0 7.46e-01 96.3% 91.4%
1758310 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.85 74.0 7.22e-01 96.9% 83.8%
328688 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.84 74.0 7.23e-01 97.9% 84.6%
2441244 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.84 80.0 7.54e-01 99.0% 86.8%
2589532 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.83 78.0 7.77e-01 97.4% 96.9%
2044957 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.82 77.0 6.98e-01 100.0% 82.8%
2389609 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.81 77.0 7.09e-01 100.0% 82.8%
215519 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.80 76.0 6.40e-01 98.4% 90.8%
1400716 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 68.0 6.54e-01 95.8% 78.3%
1867996 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 69.0 6.12e-01 95.3% 65.4%
4888111 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.79 70.0 7.13e-01 99.5% 93.7%
1405130 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.79 73.0 6.66e-01 97.4% 78.9%
289259 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.79 74.0 6.95e-01 97.9% 87.6%
2793614 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.79 70.0 6.75e-01 99.0% 83.6%
140024 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.78 72.0 6.28e-01 97.4% 77.9%
1696117 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.78 68.0 6.93e-01 96.9% 94.6%
1232 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.78 72.0 7.22e-01 97.4% 100.0%
1933849 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.78 70.0 6.59e-01 96.9% 81.2%
1949031 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.78 71.0 6.31e-01 96.3% 76.9%
2099164 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.77 71.0 6.17e-01 97.4% 72.0%
1211 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.77 71.0 6.39e-01 96.9% 74.9%
2099173 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.77 72.0 6.37e-01 99.0% 86.6%
2505858 10.2.1.88 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.77 66.0 6.57e-01 94.8% 86.3%
4900996 10.2.1.88 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.77 58.0 5.96e-01 85.3% 80.4%
3344591 10.2.1.81 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › MP 0.77 57.0 5.63e-01 94.2% 71.2%
2099184 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.77 70.0 5.96e-01 96.9% 76.0%
2440135 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.77 71.0 6.66e-01 97.4% 84.3%
4872939 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.77 72.0 6.95e-01 100.0% 90.0%
3314257 10.32.1.193 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MP 0.77 57.0 6.01e-01 94.2% 83.4%
2044958 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.77 71.0 6.36e-01 97.4% 88.2%
1234 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.77 72.0 7.22e-01 97.9% 100.0%
4814721 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.77 70.0 6.92e-01 100.0% 91.1%
1444532 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.77 71.0 6.76e-01 96.9% 85.3%
2100469 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.76 73.0 6.49e-01 100.0% 82.4%
1233 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.76 72.0 7.25e-01 98.4% 99.5%
2862065 10.2.1.15 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat 0.76 63.0 6.58e-01 97.9% 94.3%
1945727 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.75 69.0 6.22e-01 97.4% 76.5%
1694889 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.75 61.0 5.87e-01 97.4% 75.5%
169772 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.75 68.0 6.33e-01 96.9% 81.9%
1687952 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.75 67.0 6.37e-01 96.9% 81.1%
296002 10.2.1.15 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat 0.75 64.0 6.47e-01 100.0% 89.9%
2439648 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.75 69.0 6.03e-01 97.4% 74.4%
31171 10.2.1.15 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat 0.74 62.0 6.35e-01 98.4% 89.3%
1215 10.2.1.34 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat 0.74 62.0 6.54e-01 94.2% 97.1%
1489398 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.74 68.0 6.18e-01 97.4% 78.1%
31099 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.74 68.0 6.33e-01 97.4% 81.3%
1219 10.2.1.24 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP 0.73 66.0 6.74e-01 97.4% 97.3%
2983138 10.2.1.88 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.73 67.0 6.21e-01 97.4% 80.3%
1697855 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.73 65.0 6.02e-01 97.4% 74.7%
2330242 10.2.1.24 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP 0.73 60.0 6.18e-01 91.6% 90.2%
1216 10.2.1.37 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_C 0.71 58.0 6.18e-01 96.3% 98.2%
3022795 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.71 64.0 4.78e-01 96.9% 71.1%
2099165 10.2.1.22 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Peptidase_A6 0.71 65.0 5.20e-01 97.4% 69.6%
3478158 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.71 42.0 5.11e-01 88.5% 89.6%
1866052 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.71 57.0 5.60e-01 97.4% 78.4%
3586546 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.70 45.0 5.35e-01 90.1% 93.8%
1886797 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.69 62.0 5.63e-01 95.8% 75.5%
143450 10.2.1.37 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_C 0.69 55.0 5.94e-01 96.3% 98.8%
2710690 10.2.1.29 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Circo_capsid 0.68 61.0 6.07e-01 96.3% 95.0%
2884840 10.2.1.50 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.66 60.0 5.13e-01 97.4% 68.3%
148379 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.66 60.0 5.11e-01 97.4% 65.0%
140026 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.60 54.0 4.87e-01 97.4% 71.6%
3503271 10.12.1.51 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 0.60 37.0 3.69e-01 95.3% 57.5%
3511452 302.1.1.1 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.58 37.0 4.48e-01 92.1% 96.8%
3382082 207.1.1.37 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › C-JID 0.57 41.0 3.24e-01 89.0% 36.6%
3593524 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 48.0 4.71e-01 91.6% 98.0%
5040537 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 32.0 4.09e-01 84.8% 97.3%
3881289 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.56 43.0 4.66e-01 94.8% 96.9%
3544717 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 40.0 4.46e-01 91.6% 95.9%
4648393 10.32.1.2 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C 0.55 41.0 4.56e-01 90.6% 98.7%
3788318 10.32.1.17 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Allantoicase 0.55 41.0 4.60e-01 89.5% 100.0%
3168473 10.32.1.306 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF30096 0.53 46.0 4.61e-01 91.6% 98.4%
4319705 10.32.1.196 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › WLS_GOLD 0.52 44.0 4.39e-01 90.6% 100.0%
3994426 10.10.1.0 ↗ beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) 0.51 27.0 3.26e-01 93.2% 76.7%
3278369 10.32.1.31 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.51 43.0 4.07e-01 91.1% 99.1%
4493031 10.32.1.31 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.50 43.0 4.06e-01 90.6% 99.6%
D2 medium residues 244-369
PDB
Domain cluster: rep: capsid_protein__NP_056788__Hepeviridae__291484__D322-442