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structural_polyprotein

Euk-Vir

Chaetoceros_tenuissimus_RNA_virus_01

structural_polyprotein__YP_009505621__Chaetoceros_tenuissimus_RNA_virus_01__497136

Identity

Accession:
YP_009505621 ↗
Protein ID:
structural_polyprotein
Kingdom:
euk

Quality

70.4 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Pisoniviricetes› Picornavirales› Marnaviridae› Bacillarnavirus› Chaetoceros_tenuissimus_RNA_virus_01

TaxID: 497136

Cluster

View cluster (173 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 399-640
PDB
Domain cluster: rep: putative_capsid_protein__YP_009407904__Lasius_neglectus_virus_1__2018501__D51-89_108-371
D2 high residues 667-875
PDB
Domain cluster: rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08762.17 best CRPV_capsid 36.2 7.20e-09 83.7% 69.8%
CATH (77)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8b38A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.87 80.0 7.78e-01 94.7% 92.0%
7chkB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 52.0 6.53e-01 94.3% 100.0%
6jhsA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 66.0 6.04e-01 100.0% 68.5%
3afgA03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.79 37.0 5.42e-01 91.4% 95.1%
5ikuA01 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.77 36.0 5.16e-01 89.5% 91.3%
2ws9201 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 59.0 6.10e-01 96.7% 85.1%
4qpiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 57.0 5.70e-01 98.6% 75.1%
2y26A02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 56.0 6.28e-01 99.0% 97.5%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.75 38.0 5.09e-01 91.4% 88.0%
1fmd200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 56.0 5.55e-01 98.6% 72.9%
1ihmB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 58.0 5.73e-01 99.0% 75.9%
5aca300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 59.0 5.82e-01 99.0% 77.0%
1a6cA02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 56.0 6.24e-01 99.5% 97.0%
3napA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 63.0 5.74e-01 100.0% 68.9%
6eiwA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 63.0 6.61e-01 96.2% 96.4%
5mqcB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 57.0 5.52e-01 98.1% 71.9%
3napB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 58.0 5.42e-01 98.6% 68.0%
2ws9300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 60.0 5.81e-01 99.5% 77.9%
2izwC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 57.0 5.71e-01 98.6% 80.3%
4nwvA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 55.0 5.82e-01 98.1% 87.5%
4rft000 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 53.0 5.95e-01 98.6% 95.7%
5aooC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 57.0 5.66e-01 99.0% 77.7%
5k0uB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 59.0 5.72e-01 100.0% 77.0%
1b35A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 67.0 6.13e-01 100.0% 78.8%
1b35C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 64.0 5.70e-01 100.0% 69.5%
1tme300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 59.0 5.70e-01 100.0% 77.8%
4qpiC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 60.0 5.70e-01 99.5% 75.2%
1opoC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 53.0 5.86e-01 98.1% 96.4%
3jb4C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 57.0 5.40e-01 100.0% 71.8%
1bev100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 58.0 5.32e-01 100.0% 66.8%
4llfD01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 53.0 5.74e-01 98.1% 91.6%
4rs5A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 58.0 5.74e-01 100.0% 81.9%
5yl1A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 56.0 6.04e-01 96.2% 96.7%
2ztnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 58.0 6.12e-01 99.5% 96.3%
5lz6A00 2.60.120.680 Mainly Beta › Sandwich › Jelly Rolls › GOLD domain 0.70 36.0 4.62e-01 92.8% 83.3%
5mqcC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 63.0 5.76e-01 100.0% 75.8%
3cjiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 59.0 5.68e-01 100.0% 78.6%
5j09A00 2.60.120.950 Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein 0.69 53.0 5.79e-01 95.2% 97.1%
3vbhC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 59.0 5.61e-01 100.0% 77.7%
1yi9A02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.68 38.0 4.62e-01 95.2% 81.8%
3napC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 65.0 5.83e-01 100.0% 76.1%
2waoA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.68 33.0 4.31e-01 94.3% 82.9%
5j98B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 60.0 5.53e-01 98.6% 74.6%
2ws9100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 59.0 5.61e-01 100.0% 78.5%
6mrmC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 51.0 5.59e-01 98.1% 95.9%
6aj3B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 52.0 5.79e-01 94.7% 100.0%
1smvC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 57.0 5.61e-01 98.6% 84.2%
5c8cB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 58.0 5.17e-01 98.6% 67.1%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.66 39.0 4.61e-01 95.2% 83.3%
1ng0C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 55.0 5.46e-01 98.6% 83.5%
1pgl100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 53.0 5.65e-01 100.0% 95.1%
3cjiA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 61.0 5.68e-01 100.0% 84.9%
5ewnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 54.0 5.70e-01 99.0% 97.8%
4zelB01 2.60.120.310 Mainly Beta › Sandwich › Jelly Rolls › Copper type II, ascorbate-dependent monooxygenase, N-terminal domain 0.66 44.0 5.16e-01 93.8% 97.2%
1b35B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.65 57.0 5.28e-01 100.0% 74.5%
1f15B00 2.60.120.530 Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A 0.65 46.0 4.83e-01 99.5% 78.9%
6sk6A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 60.0 5.42e-01 100.0% 75.1%
1tme200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 60.0 5.55e-01 99.5% 80.8%
4bcuA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.63 49.0 5.19e-01 95.2% 89.4%
1ohfA02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.61 56.0 4.94e-01 98.6% 91.2%
2df7A02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.60 40.0 4.75e-01 94.7% 97.9%
1pgsA01 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.60 39.0 4.66e-01 94.3% 97.8%
1p8jA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 37.0 4.47e-01 93.8% 94.7%
4lorA03 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.60 33.0 4.18e-01 93.8% 91.6%
8begA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 40.0 4.55e-01 90.0% 92.5%
4h3wA02 2.60.120.1260 Mainly Beta › Sandwich › Jelly Rolls › 0.57 39.0 4.46e-01 95.2% 92.8%
2tbvA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 53.0 4.78e-01 100.0% 95.1%
2bpa200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.55 40.0 4.39e-01 94.3% 90.3%
4xuoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 38.0 4.37e-01 94.3% 96.2%
2c4xA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 39.0 4.46e-01 93.8% 99.4%
1wkyA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 36.0 4.32e-01 91.4% 100.0%
1cd3F00 2.60.169.10 Mainly Beta › Sandwich › Bacteriophage G4 Capsid Proteins Gpf, Gpg, Gpj, subunit 1 › Microviridae F protein 0.52 48.0 3.75e-01 97.6% 96.5%
1tg7A04 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 37.0 4.03e-01 95.2% 88.2%
4gwmA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 39.0 4.32e-01 93.3% 97.6%
4nehA05 2.60.40.1530 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 4 0.52 38.0 4.16e-01 97.6% 89.3%
1w99A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 38.0 4.00e-01 92.8% 82.7%
5t89X05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 27.0 3.59e-01 88.0% 94.5%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2579092 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.90 87.0 7.86e-01 100.0% 80.1%
4835076 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.88 76.0 7.93e-01 88.0% 99.0%
1866052 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.81 59.0 6.01e-01 100.0% 75.0%
1405131 10.2.1.51 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › HAV_VP 0.79 65.0 5.98e-01 100.0% 67.7%
2440134 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.79 57.0 6.03e-01 100.0% 81.4%
4588395 10.32.1.244 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29989 0.78 38.0 5.45e-01 90.4% 95.2%
4872939 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.78 60.0 6.09e-01 99.5% 79.9%
1696117 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.77 57.0 6.09e-01 97.1% 85.3%
4982154 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.77 38.0 5.47e-01 92.8% 99.0%
4888111 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.76 57.0 5.98e-01 99.0% 84.7%
1400716 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.75 57.0 5.70e-01 98.6% 75.1%
143450 10.2.1.37 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_C 0.75 56.0 6.28e-01 99.0% 97.5%
4073646 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.75 38.0 5.14e-01 93.3% 91.8%
2389608 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.75 66.0 6.28e-01 100.0% 79.4%
4882965 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.75 46.0 5.43e-01 94.3% 86.4%
1264422 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.75 59.0 5.86e-01 98.6% 78.1%
1687952 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.75 59.0 5.82e-01 99.0% 77.0%
1216 10.2.1.37 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_C 0.74 56.0 6.24e-01 99.5% 97.0%
140026 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.74 63.0 5.74e-01 100.0% 68.9%
5056929 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.74 41.0 4.90e-01 92.3% 77.9%
1841618 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.74 69.0 6.37e-01 100.0% 79.8%
1949032 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.74 57.0 5.52e-01 98.1% 71.9%
5068910 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.74 40.0 4.96e-01 93.8% 82.2%
140027 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.74 58.0 5.42e-01 98.6% 68.0%
1945727 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.73 63.0 5.88e-01 100.0% 73.7%
4900996 10.2.1.88 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.73 53.0 5.61e-01 90.0% 82.6%
2440135 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.73 63.0 6.10e-01 100.0% 81.7%
3624575 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.73 39.0 5.20e-01 91.9% 92.5%
139106 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.73 59.0 5.76e-01 99.5% 77.9%
1933849 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.72 58.0 5.71e-01 99.5% 77.6%
2044958 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.72 63.0 5.86e-01 100.0% 74.8%
2389609 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.72 59.0 5.68e-01 99.0% 74.9%
2006903 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.72 61.0 5.44e-01 100.0% 65.4%
1693524 10.2.1.49 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN 0.72 53.0 5.63e-01 98.6% 86.2%
3526370 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.71 39.0 5.13e-01 91.9% 93.3%
2579094 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.71 64.0 5.91e-01 100.0% 75.5%
2099164 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.71 64.0 5.70e-01 100.0% 69.5%
1405130 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.71 61.0 5.71e-01 99.5% 75.2%
31099 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.71 59.0 5.70e-01 100.0% 77.8%
1697855 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.71 57.0 5.40e-01 100.0% 71.8%
2414126 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.71 57.0 5.46e-01 100.0% 73.0%
1886797 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.70 60.0 5.62e-01 100.0% 73.9%
3703651 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.70 41.0 5.25e-01 94.3% 96.0%
2982483 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.70 59.0 5.68e-01 100.0% 77.6%
2983138 10.2.1.88 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.70 59.0 5.65e-01 100.0% 77.3%
1949031 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.69 63.0 5.76e-01 100.0% 75.8%
169772 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.69 59.0 5.68e-01 100.0% 78.6%
2044957 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.69 59.0 5.51e-01 98.6% 74.0%
2099184 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.69 65.0 5.71e-01 100.0% 74.3%
2439648 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.69 62.0 5.63e-01 100.0% 72.2%
3241031 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.69 38.0 4.95e-01 92.8% 95.7%
1489398 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.69 59.0 5.55e-01 100.0% 75.3%
4944602 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.69 40.0 4.68e-01 92.8% 79.3%
2726763 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.69 65.0 5.83e-01 100.0% 77.1%
2330242 10.2.1.24 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP 0.69 51.0 5.44e-01 93.8% 86.9%
140024 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.68 65.0 5.83e-01 100.0% 76.1%
3250388 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.68 37.0 4.93e-01 91.9% 94.2%
3267022 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.68 37.0 4.38e-01 93.3% 75.2%
3925162 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.68 36.0 4.84e-01 90.9% 97.3%
2100469 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.67 59.0 5.51e-01 99.0% 75.8%
2982737 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.67 63.0 5.68e-01 100.0% 75.5%
3569874 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.67 35.0 4.61e-01 93.3% 91.3%
2721878 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.66 57.0 5.36e-01 99.0% 75.6%
4626412 10.32.1.238 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29980 0.66 41.0 4.96e-01 94.7% 92.1%
1211 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.65 57.0 5.28e-01 100.0% 74.5%
1412423 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.65 38.0 4.84e-01 91.4% 94.5%
5050764 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.65 35.0 4.70e-01 90.9% 95.7%
2099173 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.65 60.0 5.49e-01 98.6% 80.6%
222219 10.2.1.40 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TNV_CP 0.63 49.0 5.19e-01 95.2% 89.4%
3597814 10.32.1.3 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.63 40.0 4.67e-01 94.7% 88.0%
4017308 10.32.1.232 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4360 0.63 43.0 4.67e-01 94.7% 81.1%
3486965 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 40.0 4.65e-01 95.7% 88.0%
3878867 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.63 37.0 4.28e-01 93.8% 79.3%
3868830 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.62 40.0 4.59e-01 96.2% 85.6%
3381013 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.62 37.0 4.18e-01 87.1% 76.9%
3805836 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 35.0 4.29e-01 91.4% 90.4%
5018271 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 33.0 4.23e-01 91.4% 92.8%
5010079 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.58 34.0 4.41e-01 91.9% 100.0%
3186189 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.55 40.0 4.43e-01 93.8% 93.3%
3243463 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 37.0 4.09e-01 95.2% 86.1%
185776 10.2.1.52 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › DUF4621 0.54 39.0 4.33e-01 92.3% 95.0%
399921 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 37.0 4.38e-01 92.3% 100.0%
3880815 10.3.1.14 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › CTHRC1_C 0.53 35.0 4.17e-01 92.8% 99.3%
4003995 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 35.0 4.06e-01 92.3% 92.7%
3264296 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.52 34.0 4.05e-01 98.6% 96.4%
4961993 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.52 35.0 4.16e-01 90.9% 100.0%
3941822 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 36.0 4.21e-01 90.4% 100.0%
4937335 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.50 37.0 4.02e-01 92.8% 91.8%
D3 medium residues 58-73_158-195_211-243
PDB
Domain cluster: representative
D4 medium residues 87-157_196-210_244-263
PDB
Domain cluster: rep: hypothetical_protein_2__YP_009336782__Changjiang_picorna-like_virus_13__1922786__D353-376_416-458_483-522
D5 medium residues 308-373_641-666
PDB