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structural_polyprotein

Euk-Vir

Blackbird_arilivirus

structural_polyprotein__YP_009553601__Blackbird_arilivirus__2099352

Identity

Accession:
YP_009553601 ↗
Protein ID:
structural_polyprotein
Kingdom:
euk

Quality

65.5 mean pLDDT

Cluster

View cluster (41 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 72-274
PDB
Domain cluster: rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF12264.15 best Waikav_capsid_1 24.9 1.90e-05 92.1% 81.2%
PF22663.3 Rhv_5 27.7 3.20e-06 85.7% 66.2%
PF00073.27 Rhv 32.1 1.30e-07 59.6% 46.8%
CATH (78)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3napB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.92 75.0 6.92e-01 93.6% 68.4%
5mqcB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.92 74.0 7.00e-01 92.6% 71.9%
1b35B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.91 78.0 7.10e-01 95.6% 70.2%
4qpiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.90 71.0 6.91e-01 92.6% 74.7%
7dodB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.89 67.0 6.94e-01 89.7% 80.8%
1fmd200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.89 68.0 6.62e-01 92.1% 72.5%
4rft000 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.87 65.0 7.31e-01 92.6% 95.1%
2gh8A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.87 68.0 6.84e-01 91.6% 79.7%
1ihmB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.86 70.0 6.84e-01 94.6% 77.3%
4nwvA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.85 66.0 6.95e-01 92.1% 87.5%
2ws9201 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.85 67.0 6.92e-01 90.1% 84.6%
5aooC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.84 69.0 6.68e-01 93.1% 77.3%
5j98B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.84 79.0 7.11e-01 96.6% 78.5%
1opoC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.84 64.0 7.06e-01 91.6% 95.8%
4qpiC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 74.0 6.83e-01 95.6% 76.8%
2ws9300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.81 68.0 6.54e-01 93.6% 77.9%
6mrmC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.81 63.0 6.85e-01 91.6% 95.3%
5aca300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 66.0 6.37e-01 93.1% 77.0%
1b35C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 72.0 6.33e-01 93.1% 68.4%
5yl1A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 67.0 7.11e-01 89.7% 96.7%
3jb4C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 65.0 6.11e-01 93.1% 70.5%
3napC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 72.0 6.35e-01 93.1% 74.3%
1tme200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 72.0 6.58e-01 93.6% 80.4%
2izwC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 64.0 6.35e-01 93.1% 80.8%
5ewnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 68.0 7.13e-01 93.1% 97.8%
6aj3B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 63.0 7.02e-01 88.2% 100.0%
2ztnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 68.0 7.08e-01 93.6% 95.8%
5c8cB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 71.0 6.21e-01 93.6% 67.1%
1tme300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 66.0 6.27e-01 93.6% 77.0%
5k0uB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 66.0 6.24e-01 93.1% 75.7%
3vbhC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 68.0 6.37e-01 93.1% 76.4%
5mqcC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 69.0 6.28e-01 93.1% 73.8%
6jhsA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 65.0 5.92e-01 94.1% 68.8%
3cjiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 66.0 6.26e-01 93.1% 77.7%
1f2nC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 64.0 6.31e-01 93.1% 84.4%
1auyB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 55.0 5.69e-01 92.6% 81.0%
1e57B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 54.0 5.69e-01 92.1% 82.5%
1smvC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 66.0 6.39e-01 93.1% 85.1%
4rs5A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 64.0 6.23e-01 94.6% 83.7%
1ng0C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 64.0 6.24e-01 93.6% 84.4%
4fy1100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 61.0 6.02e-01 92.6% 81.6%
5jzgA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 59.0 5.72e-01 95.1% 75.7%
1pgw200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 61.0 5.00e-01 95.6% 50.4%
1cwpA00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.71 46.0 5.30e-01 89.7% 87.2%
6eiwA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 61.0 6.32e-01 89.7% 96.4%
1bev100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 61.0 5.53e-01 95.1% 68.7%
2tbvA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 65.0 5.67e-01 95.6% 69.6%
1b35A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 62.0 5.64e-01 92.1% 77.7%
1cov100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 62.0 5.59e-01 95.1% 70.6%
5j09A00 2.60.120.950 Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein 0.69 54.0 5.89e-01 88.7% 96.5%
1mec100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 61.0 5.45e-01 92.6% 78.8%
2y26A02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 52.0 5.73e-01 93.1% 96.9%
2ws9100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 60.0 5.63e-01 92.1% 76.8%
1a6cA02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 52.0 5.73e-01 93.6% 96.4%
6sk6A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 62.0 5.53e-01 95.1% 71.4%
3cjiA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 59.0 5.42e-01 92.6% 83.3%
1a6cA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.65 62.0 5.06e-01 100.0% 62.1%
3napA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.65 55.0 5.03e-01 93.1% 68.2%
2id4A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 42.0 4.95e-01 89.7% 93.5%
2df7A02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.65 43.0 5.07e-01 88.7% 96.4%
2y26A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 61.0 5.02e-01 100.0% 62.0%
1pk6C00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.63 39.0 4.84e-01 87.7% 97.7%
4h3wA02 2.60.120.1260 Mainly Beta › Sandwich › Jelly Rolls › 0.63 42.0 4.78e-01 87.7% 90.1%
6s0tA01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.60 39.0 3.71e-01 94.1% 53.4%
1yi9A02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.59 38.0 4.50e-01 99.5% 94.2%
2bpa200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 43.0 4.60e-01 88.2% 90.3%
4f8lA00 2.60.40.3590 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 34.0 4.01e-01 87.7% 86.2%
2bv4A00 2.60.120.400 Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin 0.56 32.0 4.16e-01 77.8% 99.1%
3w6wB02 2.60.310.20 Mainly Beta › Sandwich › Hemocyanin; Chain: A, domain 2 › 0.56 35.0 4.11e-01 77.8% 91.2%
1dyoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 40.0 4.49e-01 86.7% 95.5%
4mxwD00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.55 35.0 4.22e-01 88.7% 96.3%
1oh4A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 42.0 4.58e-01 88.2% 93.7%
1tg7A05 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 39.0 4.20e-01 99.5% 84.1%
1m06G00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.55 44.0 4.54e-01 87.7% 90.4%
5l73A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 41.0 4.37e-01 87.2% 89.1%
2xlgA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 39.0 3.77e-01 100.0% 67.7%
6r3mA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.52 40.0 4.40e-01 87.2% 97.6%
1lkfA00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.51 42.0 3.76e-01 88.7% 75.0%
ECOD (90)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
140027 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.92 75.0 6.92e-01 93.6% 68.4%
1949032 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.92 74.0 7.00e-01 92.6% 71.9%
4882965 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.91 56.0 6.67e-01 87.2% 85.7%
1211 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.91 78.0 7.10e-01 95.6% 70.2%
1400716 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.90 71.0 6.91e-01 92.6% 74.7%
2389609 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.89 77.0 7.19e-01 93.6% 74.9%
2793614 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.89 70.0 6.92e-01 93.1% 76.2%
1696117 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.89 68.0 7.12e-01 91.6% 85.3%
2505858 10.2.1.88 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.89 65.0 6.61e-01 88.7% 76.1%
1867996 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.89 70.0 6.35e-01 92.6% 62.7%
4888111 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.88 68.0 7.11e-01 93.1% 85.2%
4872939 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.88 72.0 7.11e-01 94.1% 80.9%
1693524 10.2.1.49 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN 0.88 66.0 7.01e-01 92.6% 85.6%
2982736 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.87 74.0 7.00e-01 95.6% 74.7%
1693517 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.87 67.0 6.80e-01 90.6% 79.5%
2579093 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.87 72.0 6.83e-01 93.1% 74.0%
4814721 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.87 69.0 6.95e-01 94.1% 81.7%
4900996 10.2.1.88 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.86 62.0 6.57e-01 86.2% 81.0%
2044957 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.86 78.0 7.16e-01 95.6% 76.0%
1693522 10.2.1.49 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN 0.85 66.0 6.98e-01 92.6% 87.6%
1264422 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.85 69.0 6.73e-01 92.1% 77.6%
1933849 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.84 69.0 6.70e-01 94.1% 77.6%
1724852 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.84 64.0 7.09e-01 92.1% 95.8%
1841617 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.83 77.0 7.09e-01 97.0% 77.8%
2721878 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.83 75.0 6.90e-01 93.6% 76.0%
2099184 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.82 73.0 6.31e-01 93.1% 73.3%
1405130 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.82 74.0 6.83e-01 95.6% 76.8%
2726763 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.81 73.0 6.42e-01 93.1% 75.7%
139106 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.81 68.0 6.54e-01 93.6% 77.9%
2441244 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.81 70.0 6.78e-01 93.6% 82.3%
1687952 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 66.0 6.37e-01 93.1% 77.0%
2099164 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 72.0 6.33e-01 93.1% 68.4%
3075118 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 73.0 6.58e-01 94.1% 79.4%
1697855 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 65.0 6.11e-01 93.1% 70.5%
2099173 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 72.0 6.47e-01 93.6% 81.0%
140024 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 72.0 6.35e-01 93.1% 74.3%
2414126 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.79 66.0 6.17e-01 93.1% 71.8%
2044958 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.79 70.0 6.40e-01 93.1% 73.2%
4768609 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.79 72.0 6.42e-01 94.1% 79.6%
2539045 10.2.1.12 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Luteo_coat 0.79 53.0 6.16e-01 90.1% 93.2%
2982483 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.79 68.0 6.41e-01 93.1% 76.4%
2100469 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.79 71.0 6.52e-01 94.1% 76.2%
143448 10.2.1.38 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_N 0.79 60.0 6.64e-01 89.2% 97.0%
1214 10.2.1.38 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_N 0.78 61.0 6.53e-01 89.2% 92.6%
31099 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.78 66.0 6.27e-01 93.6% 77.0%
2440135 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.78 68.0 6.49e-01 92.6% 79.9%
1489398 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.78 67.0 6.25e-01 93.1% 74.1%
2983138 10.2.1.88 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.77 67.0 6.27e-01 93.1% 76.1%
2982737 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.77 69.0 6.13e-01 93.1% 73.7%
1949031 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.77 69.0 6.28e-01 93.1% 73.8%
1945727 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.77 67.0 6.18e-01 93.1% 72.5%
2330242 10.2.1.24 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP 0.76 58.0 6.11e-01 87.7% 86.3%
169772 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.76 66.0 6.26e-01 93.1% 77.7%
2439648 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.76 68.0 6.05e-01 93.1% 71.1%
2579094 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.76 68.0 6.15e-01 93.1% 73.9%
1405131 10.2.1.51 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › HAV_VP 0.76 64.0 5.82e-01 94.1% 68.1%
1233 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.75 63.0 6.60e-01 93.1% 94.7%
1841618 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.74 66.0 6.08e-01 92.6% 78.6%
3314257 10.32.1.193 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MP 0.74 50.0 5.32e-01 89.7% 78.3%
3344591 10.2.1.81 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › MP 0.74 49.0 4.97e-01 89.2% 66.8%
3701810 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.73 43.0 5.53e-01 94.1% 98.3%
2048473 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.73 65.0 5.97e-01 92.6% 80.6%
1219 10.2.1.24 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP 0.73 61.0 6.30e-01 95.6% 93.6%
1232 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.72 65.0 6.60e-01 93.1% 96.4%
1886797 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.72 62.0 5.72e-01 92.1% 71.9%
1215 10.2.1.34 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat 0.72 54.0 5.88e-01 92.1% 91.3%
152483 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.72 63.0 5.56e-01 94.6% 66.4%
143449 10.2.1.34 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat 0.72 56.0 5.98e-01 89.7% 92.7%
1713715 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.71 63.0 5.59e-01 95.1% 66.3%
2389608 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.71 63.0 5.88e-01 92.6% 78.6%
1204 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.71 62.0 5.52e-01 95.1% 66.0%
2880697 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.70 63.0 5.50e-01 95.1% 67.7%
2797580 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.70 41.0 4.65e-01 88.7% 74.7%
148379 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.68 61.0 5.29e-01 95.1% 64.0%
2579092 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.68 60.0 5.46e-01 93.1% 79.4%
4882276 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.68 58.0 6.00e-01 89.7% 96.3%
169770 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.67 59.0 5.42e-01 92.6% 83.3%
None — 0.67 59.0 5.75e-01 92.6% 95.4%
5046043 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.63 41.0 4.95e-01 85.2% 97.0%
3519566 10.32.1.230 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › NDNF_N 0.63 40.0 4.79e-01 86.2% 94.8%
3282993 10.32.1.31 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.60 42.0 4.72e-01 97.0% 94.7%
4281343 10.9.1.0 ↗ beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin 0.59 43.0 4.88e-01 86.7% 98.1%
5056603 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 40.0 4.72e-01 86.7% 98.6%
3801498 10.12.1.101 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC, Cupin_8 0.54 37.0 3.62e-01 93.6% 61.4%
3562185 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.54 38.0 4.19e-01 88.2% 87.7%
3593524 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 44.0 4.45e-01 87.7% 97.1%
5041444 10.1.2.184 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C 0.51 41.0 4.35e-01 88.7% 95.4%
3631512 10.9.1.3 ↗ beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin › Tyrosinase_C 0.51 38.0 4.00e-01 75.4% 94.4%
3525668 10.32.1.69 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › LAMININ_IV_B 0.51 36.0 3.54e-01 100.0% 65.9%
1297259 10.32.1.31 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.51 42.0 4.05e-01 87.7% 96.5%
D2 high residues 367-547
PDB
Domain cluster: rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00073.27 best Rhv 37.0 3.70e-09 67.4% 58.5%
D3 medium residues 611-787
PDB
Domain cluster: rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08762.17 best CRPV_capsid 25.1 1.80e-05 97.7% 69.8%
CATH (75)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3napC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 76.0 6.39e-01 100.0% 78.3%
5aca300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 73.0 6.67e-01 98.3% 80.2%
1fmd100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 59.0 5.82e-01 98.9% 74.3%
3napA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 74.0 6.31e-01 100.0% 72.7%
6eiwA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 70.0 6.79e-01 94.9% 99.5%
6jhsA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 72.0 6.28e-01 100.0% 71.2%
1b35C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 72.0 6.08e-01 100.0% 72.7%
3cjiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 73.0 6.49e-01 100.0% 81.5%
2ws9300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 72.0 6.56e-01 98.9% 81.0%
1tme300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 72.0 6.53e-01 100.0% 80.9%
5aooC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 71.0 6.53e-01 98.3% 80.0%
3vbhC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 71.0 6.33e-01 100.0% 80.6%
7chkB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 55.0 6.29e-01 89.8% 100.0%
1mec100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 70.0 5.98e-01 100.0% 86.9%
4qpiC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 70.0 6.18e-01 98.9% 77.6%
5k0uB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 70.0 6.31e-01 99.4% 79.6%
5mqcC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 70.0 6.05e-01 99.4% 76.9%
3cjiA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 67.0 5.84e-01 99.4% 86.8%
3afgA03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.72 41.0 5.25e-01 93.8% 97.1%
5jzgA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 68.0 6.18e-01 100.0% 87.2%
5j98B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 66.0 5.71e-01 98.3% 77.7%
2gh8A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 64.0 6.09e-01 97.2% 82.7%
5yl1A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 64.0 6.35e-01 94.9% 100.0%
2ws9100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 65.0 5.82e-01 99.4% 80.9%
2y26A02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 61.0 6.37e-01 98.3% 100.0%
5mqcB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 64.0 5.81e-01 97.2% 74.0%
4yrdA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.70 38.0 4.57e-01 96.6% 78.2%
3napB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 65.0 5.73e-01 98.9% 70.9%
3jb4C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 65.0 5.82e-01 99.4% 73.9%
4nwvA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 61.0 6.09e-01 97.2% 90.2%
4qpiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 62.0 5.78e-01 97.7% 77.4%
6l9iA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.69 36.0 3.58e-01 93.8% 47.8%
1opoC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 60.0 6.23e-01 97.2% 99.4%
1b35B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 64.0 5.58e-01 99.4% 76.1%
4llfD01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 62.0 6.21e-01 96.6% 98.9%
5c8cB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 63.0 5.28e-01 98.3% 68.9%
2tbvA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 63.0 5.33e-01 100.0% 96.5%
3zxaC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 61.0 5.96e-01 97.2% 89.4%
3rykA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.67 38.0 3.83e-01 93.2% 54.9%
1ohfA02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 61.0 5.09e-01 97.2% 92.2%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.67 40.0 4.82e-01 93.8% 88.9%
2ws9201 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 60.0 5.79e-01 95.5% 87.7%
6mrmC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 59.0 6.05e-01 97.2% 99.4%
3winE03 2.60.120.1090 Mainly Beta › Sandwich › Jelly Rolls › 0.65 40.0 4.91e-01 91.0% 97.3%
2bnmA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 34.0 3.95e-01 90.4% 71.7%
1pgl100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.63 58.0 5.78e-01 100.0% 97.8%
2zoeB02 2.60.120.1080 Mainly Beta › Sandwich › Jelly Rolls › 0.62 40.0 4.29e-01 88.7% 74.3%
2y0oA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 37.0 3.81e-01 88.7% 60.8%
3isrA02 2.60.40.2250 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 31.0 4.03e-01 85.9% 85.0%
4bcuA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.61 53.0 5.25e-01 94.4% 91.0%
3jciA00 2.60.120.950 Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein 0.60 53.0 5.26e-01 96.6% 96.3%
1o7dC02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 30.0 4.11e-01 80.2% 95.5%
5j09A00 2.60.120.950 Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein 0.59 52.0 5.36e-01 94.4% 98.8%
1pk6C00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.59 41.0 4.68e-01 92.1% 96.1%
4oumA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.59 41.0 4.67e-01 91.5% 94.7%
5h4cB00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.58 41.0 4.59e-01 92.7% 95.6%
1h2kA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 40.0 3.41e-01 93.8% 44.6%
1rj8A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.56 42.0 4.64e-01 93.8% 97.9%
2vvfA01 2.60.120.730 Mainly Beta › Sandwich › Jelly Rolls › 0.56 42.0 4.67e-01 93.8% 97.9%
5fuiA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 38.0 4.37e-01 92.1% 100.0%
2okxA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 41.0 4.26e-01 92.1% 82.9%
3gf6A00 2.60.120.750 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF3845 0.53 46.0 4.30e-01 92.7% 83.6%
3s7vC00 2.60.175.10 Mainly Beta › Sandwich › Polyomavirus Vp1; Chain A › Capsid protein VP1,Polyomavirus 0.52 46.0 3.99e-01 94.4% 95.9%
4jdmA03 2.60.120.1340 Mainly Beta › Sandwich › Jelly Rolls › 0.52 41.0 4.33e-01 93.2% 92.9%
4qt6A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.52 41.0 4.30e-01 87.6% 90.6%
1kxgA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.52 40.0 4.40e-01 93.8% 99.3%
3obaA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 33.0 3.73e-01 76.3% 85.7%
7u6iA01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.52 40.0 3.65e-01 98.9% 60.0%
2zxqA04 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 35.0 3.67e-01 93.8% 75.5%
8a28A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 39.0 4.33e-01 90.4% 100.0%
3hwjA00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.50 40.0 4.37e-01 89.3% 100.0%
2xomA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 39.0 4.31e-01 93.2% 100.0%
3ejkA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 33.0 3.47e-01 84.7% 72.6%
2c4xA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 42.0 4.44e-01 92.1% 100.0%
1tg7A05 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 41.0 4.20e-01 94.9% 88.1%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2440134 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.80 70.0 6.86e-01 100.0% 86.2%
140024 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 76.0 6.39e-01 100.0% 78.3%
1687952 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.78 73.0 6.67e-01 98.3% 80.2%
140026 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.77 74.0 6.31e-01 100.0% 72.7%
2579092 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.77 73.0 6.26e-01 100.0% 82.8%
2439648 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.77 73.0 6.21e-01 100.0% 74.7%
2389608 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.77 73.0 6.46e-01 100.0% 82.3%
1405131 10.2.1.51 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › HAV_VP 0.77 73.0 6.26e-01 100.0% 70.3%
169772 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.76 73.0 6.49e-01 100.0% 81.5%
1933849 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.76 72.0 6.56e-01 98.9% 79.8%
31099 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.76 72.0 6.53e-01 100.0% 80.9%
1945727 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.76 72.0 6.26e-01 100.0% 76.9%
1841618 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.75 71.0 6.23e-01 100.0% 83.7%
1489398 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.75 71.0 6.25e-01 99.4% 77.7%
2983138 10.2.1.88 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.75 71.0 6.33e-01 99.4% 79.8%
2006903 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.75 71.0 5.95e-01 100.0% 73.9%
1405130 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.75 70.0 6.18e-01 98.9% 77.6%
2982483 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.74 70.0 6.26e-01 99.4% 80.2%
2982737 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.73 69.0 5.85e-01 100.0% 77.7%
1264372 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.72 67.0 5.71e-01 98.9% 80.4%
None — 0.72 66.0 6.17e-01 98.9% 99.1%
1866791 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.72 68.0 5.84e-01 100.0% 74.9%
4971063 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.71 43.0 5.41e-01 90.4% 100.0%
4872939 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.71 66.0 6.18e-01 98.9% 83.3%
2793614 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.71 64.0 5.96e-01 97.7% 79.0%
143450 10.2.1.37 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_C 0.70 61.0 6.37e-01 98.3% 100.0%
2044957 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.70 65.0 5.74e-01 98.9% 76.8%
2441244 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.70 64.0 5.96e-01 98.9% 85.5%
140027 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.70 65.0 5.73e-01 98.9% 70.9%
1693522 10.2.1.49 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN 0.70 62.0 6.11e-01 97.7% 90.3%
1724852 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.69 60.0 6.25e-01 96.6% 98.8%
3992318 10.32.1.177 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › UPF0669 0.69 43.0 4.90e-01 93.8% 81.5%
1211 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.68 64.0 5.58e-01 99.4% 76.1%
3267725 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.68 44.0 4.96e-01 91.0% 85.2%
1693524 10.2.1.49 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN 0.67 57.0 5.72e-01 97.7% 88.4%
4665454 10.32.1.244 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29989 0.67 44.0 5.22e-01 93.8% 97.5%
5040310 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.65 42.0 5.07e-01 88.1% 100.0%
4202051 10.32.1.271 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF27237 0.64 34.0 4.58e-01 83.6% 100.0%
5005599 10.1.2.201 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PF27237 0.64 34.0 4.58e-01 83.6% 100.0%
3924847 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.64 37.0 4.48e-01 91.0% 87.0%
1298682 10.32.1.168 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › HA70_C 0.64 39.0 4.47e-01 89.8% 80.6%
1720475 10.2.1.25 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_SCP 0.64 58.0 5.66e-01 98.3% 88.8%
3931916 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.64 36.0 4.46e-01 88.1% 88.2%
3926224 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.64 36.0 4.40e-01 88.7% 85.2%
5030450 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.64 42.0 4.56e-01 89.8% 80.0%
3242233 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.63 37.0 4.60e-01 90.4% 96.2%
4166998 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.62 43.0 4.84e-01 89.3% 92.6%
3999001 10.7.1.0 ↗ beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 0.62 37.0 4.69e-01 81.4% 100.0%
3966007 10.25.1.1 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in peptidase M60 family › Jelly-roll domain in peptidase M60 family › M60-like_N 0.62 39.0 4.44e-01 91.0% 83.0%
3222026 10.4.1.9 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 0.61 36.0 4.28e-01 90.4% 87.0%
3508380 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 43.0 4.98e-01 92.1% 100.0%
3390429 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 45.0 4.93e-01 91.5% 94.5%
1878989 10.2.1.29 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Circo_capsid 0.60 54.0 5.13e-01 97.7% 95.6%
5071112 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 41.0 4.60e-01 90.4% 90.4%
4011220 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 41.0 4.66e-01 92.7% 99.2%
3900320 10.3.1.2 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.59 40.0 4.61e-01 92.1% 94.6%
4620910 10.32.1.183 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TMEM87A-B_GOLD 0.58 46.0 4.87e-01 91.0% 94.8%
4939148 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.56 29.0 3.65e-01 86.4% 81.9%
4454790 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.53 35.0 3.29e-01 93.8% 53.6%
2883092 5095.1.1.1 ↗ beta sandwiches › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › PA14 0.53 39.0 4.42e-01 89.8% 100.0%
4952104 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.52 41.0 4.19e-01 100.0% 84.0%
3243572 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.52 39.0 4.28e-01 92.1% 95.9%
1221508 11.1.1.14 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 0.51 33.0 3.77e-01 78.0% 88.9%
3886215 10.2.1.5 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.51 41.0 4.22e-01 96.0% 91.5%
3991298 10.32.1.20 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FBA 0.50 44.0 4.09e-01 93.8% 90.5%