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structural_protein
Euk-VirHalhan_virus_3_Viruses.
structural_protein__YP_009552716__Halhan_virus_3_Viruses.__X
Identity
- Accession:
- YP_009552716 ↗
- Protein ID:
- structural_protein
- Kingdom:
- euk
Quality
75.5
mean pLDDT
Cluster
View cluster (173 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 58-235
Domain cluster:
rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00073.27 best | Rhv | 50.3 | 3.10e-13 | 73.0% | 57.9% |
D2
high
residues 660-814
Domain cluster:
rep: hypothetical_protein_2__YP_009337767__Sanxia_picorna-like_virus_3__1923372__D664-871
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08762.17 best | CRPV_capsid | 74.3 | 1.50e-20 | 99.4% | 67.8% |
CATH (72)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b35A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.83 | 79.0 | 6.51e-01 | 100.0% | 67.7% |
| 3napA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.79 | 75.0 | 6.12e-01 | 100.0% | 59.5% |
| 5aooC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.79 | 68.0 | 5.95e-01 | 94.2% | 63.6% |
| 3napC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.79 | 74.0 | 5.95e-01 | 98.7% | 63.8% |
| 6eiwA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 71.0 | 6.54e-01 | 96.1% | 80.2% |
| 6jhsA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 70.0 | 5.78e-01 | 98.1% | 57.3% |
| 2ws9300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 70.0 | 6.08e-01 | 96.1% | 74.3% |
| 2gh8A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 64.0 | 5.75e-01 | 92.9% | 66.3% |
| 1b35C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 72.0 | 5.77e-01 | 100.0% | 57.8% |
| 3vbhC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 71.0 | 5.99e-01 | 98.7% | 73.1% |
| 4qpiC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 70.0 | 5.90e-01 | 98.1% | 62.2% |
| 8b38A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 68.0 | 5.87e-01 | 94.2% | 76.1% |
| 3cjiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 70.0 | 5.98e-01 | 98.7% | 71.8% |
| 1a6cA02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 58.0 | 5.70e-01 | 94.8% | 75.2% |
| 5k0uB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 70.0 | 6.00e-01 | 98.7% | 73.2% |
| 5mqcC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 70.0 | 5.79e-01 | 98.7% | 62.3% |
| 4llfD01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 60.0 | 5.72e-01 | 92.9% | 73.0% |
| 2ws9201 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 63.0 | 5.85e-01 | 91.0% | 71.3% |
| 2y26A02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 58.0 | 5.76e-01 | 95.5% | 77.8% |
| 5mqcB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 62.0 | 5.31e-01 | 92.3% | 58.0% |
| 5aca300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 67.0 | 5.86e-01 | 95.5% | 73.4% |
| 4rft000 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 58.0 | 5.73e-01 | 92.9% | 77.9% |
| 2ws9100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 66.0 | 5.55e-01 | 94.8% | 67.1% |
| 4qpiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 59.0 | 5.27e-01 | 93.5% | 60.8% |
| 1tme300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 68.0 | 5.85e-01 | 98.1% | 73.0% |
| 1tme200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 65.0 | 5.43e-01 | 94.8% | 69.4% |
| 1ihmB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 65.0 | 5.72e-01 | 94.2% | 75.5% |
| 2tbvA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 59.0 | 4.80e-01 | 94.8% | 47.2% |
| 3napB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 61.0 | 5.16e-01 | 92.9% | 56.7% |
| 1mec100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 67.0 | 5.43e-01 | 100.0% | 60.2% |
| 6mrmC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 57.0 | 5.54e-01 | 92.9% | 77.5% |
| 1c8nC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 62.0 | 5.46e-01 | 92.9% | 71.2% |
| 3jb4C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 64.0 | 5.47e-01 | 96.8% | 68.5% |
| 2y26A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 56.0 | 4.30e-01 | 90.3% | 38.0% |
| 1bev100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 62.0 | 5.15e-01 | 94.8% | 57.5% |
| 6sk6A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 62.0 | 5.08e-01 | 94.2% | 56.4% |
| 5yl1A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 60.0 | 5.69e-01 | 91.0% | 79.0% |
| 1cov100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 62.0 | 5.08e-01 | 94.8% | 58.7% |
| 2ztnA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 62.0 | 5.78e-01 | 96.1% | 79.5% |
| 1auyB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 56.0 | 5.23e-01 | 94.2% | 70.9% |
| 1b35B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 61.0 | 5.06e-01 | 94.2% | 62.7% |
| 5j98B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 63.0 | 5.23e-01 | 98.7% | 61.2% |
| 1ng0C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 59.0 | 5.25e-01 | 92.9% | 72.0% |
| 4fy1100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 60.0 | 5.36e-01 | 98.1% | 68.7% |
| 1e57B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 54.0 | 5.09e-01 | 92.9% | 71.6% |
| 3jciA00 | 2.60.120.950 | Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein | 0.66 | 57.0 | 5.30e-01 | 91.6% | 94.2% |
| 5j09A00 | 2.60.120.950 | Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein | 0.66 | 55.0 | 5.37e-01 | 88.4% | 95.9% |
| 5ewnA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 58.0 | 5.50e-01 | 94.8% | 79.9% |
| 3cjiA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 61.0 | 5.12e-01 | 100.0% | 64.7% |
| 6f2sH01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 53.0 | 4.79e-01 | 87.7% | 83.7% |
| 1f8vC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 54.0 | 4.28e-01 | 92.3% | 76.5% |
| 1novA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 53.0 | 4.22e-01 | 94.2% | 73.8% |
| 1o91A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 39.0 | 4.26e-01 | 89.0% | 82.4% |
| 5b71E00 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.57 | 33.0 | 4.07e-01 | 87.1% | 92.5% |
| 2qngA01 | 2.60.60.30 | Mainly Beta › Sandwich › Lipoxygenase-1 › sav2460 like domains | 0.57 | 41.0 | 4.09e-01 | 77.4% | 70.3% |
| 2lrgA00 | 2.60.60.60 | Mainly Beta › Sandwich › Lipoxygenase-1 › | 0.56 | 35.0 | 3.88e-01 | 80.6% | 77.8% |
| 4oq8A00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.56 | 41.0 | 4.24e-01 | 88.4% | 81.9% |
| 1kxgA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 40.0 | 4.21e-01 | 87.1% | 81.2% |
| 3w6wB02 | 2.60.310.20 | Mainly Beta › Sandwich › Hemocyanin; Chain: A, domain 2 › | 0.55 | 37.0 | 3.91e-01 | 79.4% | 75.7% |
| 4mxwD00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 40.0 | 4.27e-01 | 89.0% | 86.7% |
| 4msvA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 40.0 | 4.29e-01 | 89.0% | 86.9% |
| 1stmA00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.55 | 44.0 | 4.57e-01 | 91.0% | 93.6% |
| 3gf6A00 | 2.60.120.750 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF3845 | 0.54 | 44.0 | 3.96e-01 | 87.7% | 82.6% |
| 3obaA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 4.21e-01 | 83.2% | 92.9% |
| 4b60A02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 45.0 | 4.54e-01 | 92.9% | 91.0% |
| 4icwA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.53 | 40.0 | 4.29e-01 | 78.7% | 98.5% |
| 7clyA01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.52 | 39.0 | 3.77e-01 | 77.4% | 98.3% |
| 4hssB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 38.0 | 4.19e-01 | 78.7% | 92.9% |
| 4ht1T00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 38.0 | 4.15e-01 | 90.3% | 93.1% |
| 3w5nA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 39.0 | 3.84e-01 | 87.1% | 75.4% |
| 4nreA01 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.50 | 32.0 | 3.58e-01 | 78.1% | 81.7% |
| 2a6vB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 42.0 | 3.79e-01 | 90.3% | 95.9% |
ECOD (83)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1866052 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.87 | 69.0 | 6.16e-01 | 94.8% | 61.1% |
| 2665487 | 10.2.1.103 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Vp24_capsid | 0.85 | 60.0 | 6.22e-01 | 94.8% | 76.2% |
| 2440134 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.84 | 68.0 | 6.33e-01 | 98.7% | 68.6% |
| 1213 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.83 | 79.0 | 6.51e-01 | 100.0% | 67.7% |
| 2048473 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.83 | 78.0 | 6.46e-01 | 98.7% | 67.9% |
| 1841618 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.83 | 78.0 | 6.45e-01 | 98.7% | 65.5% |
| 2579092 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.81 | 78.0 | 6.30e-01 | 100.0% | 67.8% |
| 140026 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.79 | 75.0 | 6.12e-01 | 100.0% | 59.5% |
| 140024 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.79 | 74.0 | 5.95e-01 | 98.7% | 63.8% |
| 2389608 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.78 | 74.0 | 6.23e-01 | 100.0% | 66.3% |
| 1945727 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.78 | 72.0 | 5.96e-01 | 98.1% | 59.2% |
| 4900996 | 10.2.1.88 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat | 0.77 | 65.0 | 6.06e-01 | 93.5% | 73.4% |
| 2099184 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.77 | 73.0 | 5.72e-01 | 100.0% | 60.3% |
| 1405131 | 10.2.1.51 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › HAV_VP | 0.77 | 70.0 | 5.73e-01 | 98.1% | 56.7% |
| 2726763 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.77 | 72.0 | 5.81e-01 | 100.0% | 62.5% |
| 4835076 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.77 | 73.0 | 6.68e-01 | 100.0% | 94.3% |
| 1405130 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.76 | 70.0 | 5.91e-01 | 97.4% | 61.8% |
| 139106 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.76 | 70.0 | 6.04e-01 | 96.1% | 74.3% |
| 2099164 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.76 | 72.0 | 5.77e-01 | 100.0% | 57.8% |
| 2982483 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.76 | 71.0 | 6.05e-01 | 98.7% | 73.4% |
| 2044958 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.76 | 70.0 | 5.83e-01 | 100.0% | 59.8% |
| 2439648 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.75 | 71.0 | 5.72e-01 | 98.7% | 59.7% |
| 1216 | 10.2.1.37 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_C | 0.75 | 58.0 | 5.70e-01 | 94.8% | 75.2% |
| 1489398 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.75 | 70.0 | 5.88e-01 | 98.7% | 71.3% |
| 2982737 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.75 | 70.0 | 5.64e-01 | 98.7% | 63.7% |
| 2006903 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.75 | 70.0 | 5.59e-01 | 100.0% | 54.3% |
| 2579094 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.75 | 71.0 | 5.81e-01 | 100.0% | 63.2% |
| 143450 | 10.2.1.37 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_C | 0.75 | 58.0 | 5.76e-01 | 95.5% | 77.8% |
| 1687952 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.74 | 67.0 | 5.86e-01 | 95.5% | 73.4% |
| 140694 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.73 | 65.0 | 5.54e-01 | 94.8% | 67.1% |
| 4768609 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.73 | 65.0 | 5.32e-01 | 94.2% | 76.7% |
| 1400716 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.73 | 59.0 | 5.27e-01 | 93.5% | 60.8% |
| 2440135 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.73 | 67.0 | 5.75e-01 | 100.0% | 65.1% |
| 31099 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.73 | 68.0 | 5.85e-01 | 98.1% | 73.0% |
| 2099173 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.72 | 64.0 | 5.26e-01 | 94.2% | 68.3% |
| 4872939 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.72 | 65.0 | 5.80e-01 | 94.8% | 78.0% |
| 1713715 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.72 | 64.0 | 5.12e-01 | 94.2% | 53.7% |
| 148379 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.71 | 63.0 | 5.02e-01 | 94.2% | 52.2% |
| 140027 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.71 | 61.0 | 5.16e-01 | 92.9% | 56.7% |
| 2414126 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.71 | 65.0 | 5.49e-01 | 96.1% | 69.7% |
| 2884840 | 10.2.1.50 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.71 | 63.0 | 5.01e-01 | 94.2% | 52.9% |
| 152483 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.71 | 63.0 | 5.12e-01 | 94.8% | 61.1% |
| 2721878 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.70 | 61.0 | 5.12e-01 | 92.9% | 56.4% |
| 1697855 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.70 | 64.0 | 5.47e-01 | 96.8% | 68.5% |
| 4882276 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.70 | 62.0 | 5.81e-01 | 94.8% | 86.3% |
| 3243597 | 10.32.1.277 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF870 | 0.69 | 39.0 | 5.09e-01 | 74.8% | 100.0% |
| 1219 | 10.2.1.24 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP | 0.69 | 59.0 | 5.58e-01 | 99.4% | 76.1% |
| 2044957 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.69 | 63.0 | 5.30e-01 | 98.1% | 60.4% |
| 1211 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.68 | 61.0 | 5.06e-01 | 94.2% | 62.7% |
| 2579093 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.67 | 58.0 | 5.05e-01 | 92.9% | 62.8% |
| 1106655 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.67 | 58.0 | 5.33e-01 | 94.8% | 76.0% |
| 2710690 | 10.2.1.29 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Circo_capsid | 0.66 | 57.0 | 5.20e-01 | 91.6% | 90.0% |
| 1878989 | 10.2.1.29 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Circo_capsid | 0.66 | 57.0 | 5.15e-01 | 91.6% | 93.2% |
| 1877512 | 10.2.1.32 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Astro_capsid_N | 0.66 | 58.0 | 5.44e-01 | 93.5% | 78.8% |
| 143449 | 10.2.1.34 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat | 0.66 | 53.0 | 5.11e-01 | 96.8% | 75.7% |
| 1215 | 10.2.1.34 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat | 0.65 | 51.0 | 4.97e-01 | 96.8% | 75.6% |
| 3597813 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.64 | 43.0 | 4.83e-01 | 85.2% | 89.6% |
| 4049468 | 10.32.1.3 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III | 0.64 | 41.0 | 4.62e-01 | 76.8% | 84.2% |
| 4048098 | 10.32.1.243 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29992 | 0.61 | 46.0 | 4.95e-01 | 87.1% | 90.4% |
| 3108819 | 10.2.1.11 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Gemini_coat | 0.60 | 51.0 | 4.61e-01 | 91.6% | 89.8% |
| 1114663 | 10.2.1.22 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Peptidase_A6 | 0.60 | 52.0 | 4.06e-01 | 92.9% | 56.7% |
| 3606027 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.58 | 46.0 | 4.76e-01 | 87.1% | 87.6% |
| 3344591 | 10.2.1.81 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › MP | 0.56 | 47.0 | 4.29e-01 | 88.4% | 67.3% |
| 3909542 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.56 | 50.0 | 4.51e-01 | 96.8% | 92.4% |
| 3238302 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.55 | 44.0 | 4.23e-01 | 83.9% | 97.1% |
| 5084049 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 42.0 | 4.57e-01 | 89.7% | 98.4% |
| 3890782 | 10.3.1.0 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like | 0.54 | 44.0 | 4.59e-01 | 89.0% | 92.4% |
| 3884618 | 10.32.1.225 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF31127 | 0.54 | 45.0 | 4.33e-01 | 89.7% | 87.8% |
| 3186772 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.53 | 43.0 | 4.04e-01 | 85.2% | 96.8% |
| 3558753 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.53 | 33.0 | 3.70e-01 | 77.4% | 80.9% |
| 5033494 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 34.0 | 3.97e-01 | 87.1% | 92.4% |
| 3199216 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.53 | 42.0 | 4.22e-01 | 84.5% | 100.0% |
| 5081601 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 38.0 | 4.01e-01 | 86.5% | 82.1% |
| 5027703 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 44.0 | 4.45e-01 | 94.2% | 90.9% |
| 4003701 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.52 | 32.0 | 3.79e-01 | 78.7% | 92.0% |
| 3896769 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.52 | 43.0 | 4.08e-01 | 89.0% | 84.3% |
| 3725581 | 10.1.1.8 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY | 0.52 | 45.0 | 4.05e-01 | 92.9% | 90.2% |
| 3593524 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 42.0 | 3.85e-01 | 86.5% | 97.1% |
| 5055872 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 43.0 | 4.32e-01 | 87.1% | 97.4% |
| 3401623 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.52 | 40.0 | 3.55e-01 | 80.6% | 70.0% |
| 3392540 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.51 | 44.0 | 4.20e-01 | 96.1% | 95.8% |
| 5083911 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.50 | 43.0 | 4.10e-01 | 91.6% | 93.8% |
| 4959911 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.50 | 40.0 | 4.16e-01 | 83.9% | 91.7% |
D3
high
residues 816-922
D4
medium
residues 385-418_444-476_514-544
Domain cluster:
rep: hypothetical_protein_2__YP_009336782__Changjiang_picorna-like_virus_13__1922786__D353-376_416-458_483-522
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3napC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.94 | 90.0 | 6.22e-01 | 100.0% | 68.5% |
| 4qpiC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.94 | 91.0 | 6.44e-01 | 100.0% | 69.1% |
| 1b35C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.93 | 90.0 | 6.16e-01 | 100.0% | 62.8% |
| 5mqcC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.91 | 86.0 | 6.10e-01 | 100.0% | 67.7% |
| 5aooC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.86 | 82.0 | 6.07e-01 | 100.0% | 70.5% |
| 3jb4C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.86 | 81.0 | 5.88e-01 | 100.0% | 63.9% |
| 3vbhC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.86 | 81.0 | 5.88e-01 | 100.0% | 70.2% |
| 7dodB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.84 | 79.0 | 6.14e-01 | 100.0% | 75.6% |
| 1tme300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.83 | 78.0 | 5.77e-01 | 100.0% | 70.0% |
| 3cjiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.83 | 78.0 | 5.71e-01 | 100.0% | 71.0% |
| 2ws9300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.83 | 78.0 | 5.78e-01 | 100.0% | 70.4% |
| 1ihmB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.83 | 78.0 | 5.81e-01 | 100.0% | 68.2% |
| 2gh8A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.82 | 77.0 | 5.92e-01 | 100.0% | 72.8% |
| 5k0uB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.81 | 76.0 | 5.58e-01 | 100.0% | 69.4% |
| 4qpiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.81 | 75.0 | 5.69e-01 | 100.0% | 68.2% |
| 5mqcB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.80 | 75.0 | 5.51e-01 | 100.0% | 65.8% |
| 1tme200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.79 | 73.0 | 5.28e-01 | 100.0% | 74.1% |
| 1fmd200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 73.0 | 5.50e-01 | 100.0% | 66.1% |
| 5c8cB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 72.0 | 5.06e-01 | 100.0% | 61.9% |
| 2ws9201 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 70.0 | 5.48e-01 | 100.0% | 80.0% |
| 6aj3B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 68.0 | 5.67e-01 | 100.0% | 97.0% |
| 4nwvA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 68.0 | 5.46e-01 | 100.0% | 81.5% |
| 1opoC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 64.0 | 5.38e-01 | 100.0% | 90.3% |
| 4fy1100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 61.0 | 4.72e-01 | 100.0% | 76.0% |
| 1cov100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 58.0 | 4.22e-01 | 100.0% | 62.5% |
| 4exkA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 47.0 | 4.66e-01 | 98.0% | 82.7% |
| 1p5uB00 | 2.60.40.1090 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain | 0.56 | 49.0 | 4.28e-01 | 98.0% | 83.9% |
| 2vdrB02 | 2.60.40.1510 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 | 0.55 | 47.0 | 4.11e-01 | 96.9% | 60.8% |
| 3am2A02 | 2.60.120.1050 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 47.0 | 4.47e-01 | 100.0% | 84.6% |
| 3vi3B02 | 2.60.40.1510 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 | 0.53 | 45.0 | 4.03e-01 | 96.9% | 67.4% |
| 6w5yC01 | 3.90.310.10 | Alpha Beta › Alpha-Beta Complex › Viral Glycoprotein Gp70 › ENV polyprotein, receptor-binding domain | 0.53 | 45.0 | 3.95e-01 | 93.9% | 91.7% |
| 2ds4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 42.0 | 4.19e-01 | 100.0% | 82.9% |
| 2axwA01 | 2.60.40.1570 | Mainly Beta › Sandwich › Immunoglobulin-like › Dr adhesin | 0.52 | 46.0 | 4.40e-01 | 100.0% | 97.5% |
| 5hp5A01 | 2.60.40.1860 | Mainly Beta › Sandwich › Immunoglobulin-like › Protein-arginine deiminase, N-terminal domain | 0.52 | 42.0 | 3.90e-01 | 98.0% | 69.8% |
| 2xbtA00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.52 | 44.0 | 3.85e-01 | 100.0% | 60.1% |
| 2fd8A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.52 | 46.0 | 3.68e-01 | 100.0% | 50.3% |
| 4oumA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 46.0 | 4.16e-01 | 99.0% | 97.0% |
| 1ow0A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 4.05e-01 | 96.9% | 84.0% |
| 1rhfA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 3.77e-01 | 93.9% | 80.2% |
| 5buvB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 44.0 | 3.71e-01 | 99.0% | 54.9% |
| 1im3D00 | 2.60.40.1200 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 40.0 | 4.06e-01 | 99.0% | 88.4% |
| 4b97A00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.50 | 44.0 | 3.86e-01 | 99.0% | 64.9% |
| 3f8uD03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 41.0 | 4.08e-01 | 99.0% | 86.8% |
| 6tqdC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 39.0 | 3.96e-01 | 100.0% | 86.5% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1405130 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.94 | 91.0 | 6.45e-01 | 100.0% | 69.1% |
| 140024 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.94 | 90.0 | 6.22e-01 | 100.0% | 68.5% |
| 2099164 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.93 | 90.0 | 6.16e-01 | 100.0% | 62.8% |
| 2044958 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.93 | 89.0 | 6.32e-01 | 100.0% | 66.9% |
| 2099184 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.92 | 88.0 | 5.99e-01 | 100.0% | 67.0% |
| 2726763 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.92 | 87.0 | 6.05e-01 | 100.0% | 69.3% |
| 1949031 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.91 | 86.0 | 6.10e-01 | 100.0% | 67.7% |
| 2579094 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.90 | 86.0 | 6.05e-01 | 100.0% | 67.4% |
| 2982737 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.89 | 85.0 | 5.89e-01 | 100.0% | 67.6% |
| 2440135 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.88 | 84.0 | 6.15e-01 | 100.0% | 73.8% |
| 2439648 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.88 | 84.0 | 5.83e-01 | 100.0% | 65.6% |
| 2414126 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.87 | 82.0 | 5.95e-01 | 100.0% | 65.1% |
| 1933849 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.86 | 82.0 | 6.06e-01 | 100.0% | 69.5% |
| 1697855 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.86 | 81.0 | 5.88e-01 | 100.0% | 63.9% |
| 2044957 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.86 | 80.0 | 5.78e-01 | 100.0% | 67.6% |
| 2983138 | 10.2.1.88 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat | 0.85 | 80.0 | 5.85e-01 | 100.0% | 69.7% |
| 2389609 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.84 | 79.0 | 5.79e-01 | 100.0% | 68.2% |
| 2982483 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.84 | 79.0 | 5.78e-01 | 100.0% | 70.0% |
| 1696117 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.84 | 79.0 | 6.26e-01 | 100.0% | 78.8% |
| 1489398 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.84 | 79.0 | 5.70e-01 | 100.0% | 68.0% |
| 2793614 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.83 | 79.0 | 5.91e-01 | 100.0% | 68.2% |
| 31099 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.83 | 78.0 | 5.77e-01 | 100.0% | 70.0% |
| 1693517 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.82 | 77.0 | 5.94e-01 | 100.0% | 73.5% |
| 4872939 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.82 | 77.0 | 5.84e-01 | 100.0% | 71.8% |
| 4888111 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.81 | 77.0 | 6.00e-01 | 100.0% | 76.2% |
| 1400716 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.81 | 75.0 | 5.69e-01 | 100.0% | 68.2% |
| 2100469 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.81 | 75.0 | 5.40e-01 | 100.0% | 69.5% |
| 143449 | 10.2.1.34 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat | 0.80 | 74.0 | 6.00e-01 | 100.0% | 85.3% |
| 2505858 | 10.2.1.88 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat | 0.80 | 75.0 | 5.80e-01 | 100.0% | 72.6% |
| 1219 | 10.2.1.24 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP | 0.79 | 73.0 | 5.80e-01 | 100.0% | 83.0% |
| 1264422 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.75 | 69.0 | 5.23e-01 | 100.0% | 71.2% |
| 2330242 | 10.2.1.24 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP | 0.73 | 67.0 | 5.39e-01 | 100.0% | 81.4% |
| 3715555 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.61 | 51.0 | 4.98e-01 | 100.0% | 82.4% |
| 3231688 | 10.32.1.180 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CEP104_N | 0.61 | 54.0 | 4.71e-01 | 100.0% | 92.3% |
| 3353758 | 10.32.1.193 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MP | 0.60 | 53.0 | 4.95e-01 | 98.0% | 97.5% |
| 4951620 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.57 | 52.0 | 4.97e-01 | 100.0% | 99.1% |
| 3477591 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.55 | 48.0 | 4.26e-01 | 100.0% | 68.0% |
| 3879285 | 10.4.1.23 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CDCP1_CUB_6 | 0.55 | 49.0 | 4.61e-01 | 100.0% | 87.5% |
| 3902170 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.55 | 50.0 | 4.58e-01 | 99.0% | 96.8% |
| 3908506 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.55 | 49.0 | 4.36e-01 | 99.0% | 92.1% |
| 3491698 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 48.0 | 4.05e-01 | 100.0% | 65.3% |
| 3470239 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.54 | 48.0 | 4.24e-01 | 98.0% | 85.5% |
| 3630303 | 11.1.1.12 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin | 0.54 | 40.0 | 4.13e-01 | 99.0% | 83.2% |
| 5038712 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 43.0 | 4.46e-01 | 98.0% | 95.6% |
| 3778801 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.53 | 47.0 | 4.19e-01 | 99.0% | 89.3% |
| 3389203 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.53 | 46.0 | 4.11e-01 | 99.0% | 82.1% |
| 3994735 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.52 | 46.0 | 4.27e-01 | 98.0% | 88.0% |
| 1868456 | 3156.1.1.10 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › PAD_N | 0.51 | 41.0 | 4.19e-01 | 96.9% | 90.5% |
| 5070959 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.51 | 42.0 | 4.28e-01 | 88.8% | 93.7% |
| 3595596 | 10.35.1.1 ↗ | beta sandwiches › jelly-roll › ER-derived vesicles protein Erv41p lumenal domain › ER-derived vesicles protein Erv41p lumenal domain › COPIIcoated_ERV,ERGIC_N | 0.51 | 42.0 | 3.36e-01 | 90.8% | 44.4% |
| 3601974 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 40.0 | 3.67e-01 | 100.0% | 64.6% |
D5
medium
residues 419-443_477-513
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5mqcC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.87 | 79.0 | 5.12e-01 | 100.0% | 37.7% |
| 1b35C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.85 | 78.0 | 4.92e-01 | 100.0% | 38.3% |
| 3napC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.84 | 76.0 | 4.87e-01 | 100.0% | 43.1% |
| 8b38A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.80 | 72.0 | 4.80e-01 | 98.4% | 62.4% |
| 3napA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.79 | 72.0 | 4.63e-01 | 100.0% | 47.0% |
| 2ws9300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 70.0 | 4.65e-01 | 98.4% | 42.5% |
| 5k0uB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 69.0 | 4.54e-01 | 98.4% | 39.6% |
| 1tme300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 66.0 | 4.38e-01 | 96.8% | 41.7% |
| 7chkB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 66.0 | 5.08e-01 | 100.0% | 59.1% |
| 3jb4C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 63.0 | 4.17e-01 | 96.8% | 36.5% |
| 6jhsA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 64.0 | 4.20e-01 | 100.0% | 40.8% |
| 5yl1A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 59.0 | 4.23e-01 | 98.4% | 55.8% |
| 2y26A02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 59.0 | 4.38e-01 | 98.4% | 58.6% |
| 1opoC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 49.0 | 3.75e-01 | 98.4% | 58.8% |
| 2wliA02 | 2.60.40.1400 | Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 | 0.52 | 40.0 | 3.02e-01 | 87.1% | 82.0% |
| 3waiA02 | 2.60.40.3390 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 36.0 | 3.22e-01 | 77.4% | 88.2% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1949031 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.87 | 79.0 | 5.12e-01 | 100.0% | 37.7% |
| 2982483 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.80 | 74.0 | 4.80e-01 | 98.4% | 39.2% |
| 2048473 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.78 | 72.0 | 4.66e-01 | 100.0% | 50.0% |
| 2389608 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.77 | 71.0 | 4.62e-01 | 100.0% | 53.1% |
| 31099 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.75 | 66.0 | 4.38e-01 | 96.8% | 41.7% |
| 2440134 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.75 | 68.0 | 4.72e-01 | 100.0% | 48.9% |
| 5060374 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.52 | 41.0 | 2.64e-01 | 95.2% | 86.2% |
| 2505866 | 1.2.1.4 ↗ | beta barrels › cradle loop barrel › Capsid protein protrusion (P) domain › Capsid protein protrusion (P) domain › Calici_coat, Calici_coat_C | 0.51 | 42.0 | 3.28e-01 | 96.8% | 48.0% |