←Back to structures
sw_7_scaffold_1_prodigal-single.1__X__X__00007
Bact-Virsw_7_scaffold_1_prodigal-single.1__X__X__00007
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-151
Domain cluster:
rep: DGJ7_scaffold_2_2069_prodigal-single.1__X__X__00356__D1-122_262-302
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qmiA02 | 2.40.128.210 | Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain | 0.78 | 29.0 | 3.30e-01 | 99.2% | 45.0% |
| 2crqA01 | 3.30.110.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain | 0.66 | 43.0 | 5.09e-01 | 79.4% | 100.0% |
| 2ln3A00 | 3.30.110.140 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › | 0.65 | 38.0 | 4.64e-01 | 80.2% | 90.4% |
| 3rf9B02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 58.0 | 4.49e-01 | 97.7% | 66.8% |
| 1mpgA01 | 3.30.310.20 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain | 0.64 | 33.0 | 3.58e-01 | 88.5% | 57.1% |
| 6vudA02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.60 | 33.0 | 4.26e-01 | 75.6% | 94.7% |
| 3m07A04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.59 | 31.0 | 3.86e-01 | 87.8% | 90.0% |
| 2oivA00 | 3.40.395.10 | Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A | 0.57 | 39.0 | 3.53e-01 | 71.8% | 52.9% |
| 1ig8A02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 43.0 | 4.35e-01 | 80.9% | 91.0% |
| 2ffsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 40.0 | 3.93e-01 | 89.3% | 69.0% |
| 1f0cA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.55 | 32.0 | 3.37e-01 | 89.3% | 62.7% |
| 3holA03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 27.0 | 3.17e-01 | 100.0% | 66.3% |
| 2okxA04 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.54 | 34.0 | 4.05e-01 | 71.8% | 91.3% |
| 6ksrA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 42.0 | 3.98e-01 | 83.2% | 92.5% |
| 3edfA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 31.0 | 3.65e-01 | 85.5% | 87.5% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 36.0 | 3.62e-01 | 89.3% | 66.7% |
| 3bt7A02 | 2.40.50.1070 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 37.0 | 3.65e-01 | 95.4% | 65.5% |
| 1pcfA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.53 | 24.0 | 3.26e-01 | 80.2% | 83.3% |
| 1j72A01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.53 | 37.0 | 4.06e-01 | 95.4% | 88.1% |
| 4aghA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.52 | 28.0 | 3.38e-01 | 87.0% | 81.2% |
| 2bs6A01 | 2.40.128.190 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 33.0 | 3.88e-01 | 94.7% | 98.8% |
| 3bdrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 31.0 | 2.96e-01 | 89.3% | 48.1% |
| 5e1qA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 36.0 | 4.10e-01 | 93.9% | 99.0% |
| 7b3aA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 42.0 | 4.07e-01 | 95.4% | 80.5% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3386910 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.76 | 41.0 | 5.48e-01 | 74.8% | 98.6% |
| 3740981 | 328.7.1.1 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain › Smr | 0.74 | 48.0 | 5.77e-01 | 82.4% | 100.0% |
| 3248361 | 328.7.1.0 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain | 0.71 | 52.0 | 5.62e-01 | 88.5% | 90.0% |
| 3459409 | 328.7.1.0 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain | 0.70 | 50.0 | 5.58e-01 | 84.0% | 95.0% |
| 3222621 | 328.7.1.0 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain | 0.68 | 48.0 | 5.31e-01 | 87.8% | 89.5% |
| 3816680 | 109.4.1.1260 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long | 0.67 | 52.0 | 3.68e-01 | 100.0% | 27.8% |
| 3738698 | 213.1.1.6 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ODC_AZ | 0.66 | 52.0 | 5.46e-01 | 99.2% | 91.7% |
| 3611405 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.65 | 33.0 | 4.40e-01 | 83.2% | 96.9% |
| 5004871 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.64 | 32.0 | 3.75e-01 | 86.3% | 67.8% |
| 3178131 | 328.7.1.0 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain | 0.64 | 51.0 | 5.48e-01 | 89.3% | 99.1% |
| 3494198 | 328.7.1.0 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain | 0.64 | 53.0 | 4.63e-01 | 87.8% | 66.3% |
| 4029225 | 246.3.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like | 0.63 | 57.0 | 4.03e-01 | 97.7% | 50.3% |
| 4956819 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 42.0 | 4.49e-01 | 90.8% | 80.9% |
| 3248798 | 246.3.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like | 0.62 | 55.0 | 4.24e-01 | 96.9% | 57.3% |
| 3273439 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.62 | 56.0 | 4.26e-01 | 97.7% | 51.7% |
| 3239519 | 4099.1.1.29 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF29306 | 0.60 | 35.0 | 3.41e-01 | 84.0% | 51.7% |
| 4975626 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.60 | 53.0 | 5.24e-01 | 100.0% | 93.0% |
| 3245132 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.60 | 52.0 | 5.30e-01 | 94.7% | 100.0% |
| 5052219 | 246.3.1.10 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos_PGAP2IP | 0.59 | 54.0 | 4.33e-01 | 97.7% | 56.9% |
| 3239880 | 4099.1.1.29 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF29306 | 0.59 | 33.0 | 3.35e-01 | 84.7% | 53.3% |
| 3938069 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.59 | 51.0 | 5.14e-01 | 95.4% | 98.5% |
| 4647342 | 12.1.1.53 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amylase_C_2 | 0.59 | 33.0 | 4.00e-01 | 87.8% | 88.7% |
| 3735206 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.58 | 52.0 | 3.80e-01 | 97.7% | 61.4% |
| 4804719 | 219.1.1.68 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › RickCE_cat | 0.58 | 35.0 | 3.43e-01 | 73.3% | 54.2% |
| 4028555 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.57 | 32.0 | 4.17e-01 | 84.0% | 96.0% |
| 3267568 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.57 | 48.0 | 3.96e-01 | 93.9% | 49.4% |
| 3232635 | 246.3.1.4 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos2 | 0.57 | 50.0 | 3.90e-01 | 96.9% | 60.3% |
| 3170444 | 2008.6.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central | 0.57 | 50.0 | 4.33e-01 | 95.4% | 69.5% |
| 3365771 | 2008.6.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central | 0.55 | 46.0 | 3.82e-01 | 92.4% | 60.0% |
| 5076709 | 247.1.1.17 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › ODP | 0.55 | 43.0 | 3.62e-01 | 95.4% | 48.3% |
| 3650904 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 30.0 | 3.47e-01 | 90.1% | 74.7% |
| 3614729 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.53 | 46.0 | 4.11e-01 | 94.7% | 73.7% |
| 3654541 | 2.1.1.223 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28721 | 0.53 | 29.0 | 3.19e-01 | 90.8% | 64.5% |
| 3353667 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.52 | 40.0 | 3.88e-01 | 85.5% | 71.7% |
| 4514947 | 1032.1.1.0 ↗ | alpha arrays › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain | 0.52 | 45.0 | 2.65e-01 | 95.4% | 12.8% |
| 3313644 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.52 | 37.0 | 4.08e-01 | 81.7% | 93.3% |
| 3444879 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.52 | 39.0 | 3.77e-01 | 85.5% | 69.3% |
| 4999027 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 27.0 | 3.50e-01 | 90.8% | 89.3% |
| 4994932 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 42.0 | 3.68e-01 | 90.8% | 76.6% |
| 3492201 | 295.1.1.1 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 | 0.51 | 27.0 | 3.37e-01 | 83.2% | 86.7% |
| 3966655 | 206.1.1.17 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Kdo | 0.50 | 44.0 | 3.50e-01 | 96.2% | 62.3% |