←Back to structures

sw_7_scaffold_1_prodigal-single.1__X__X__00132

Bact-Vir

sw_7_scaffold_1_prodigal-single.1__X__X__00132

Identity

Kingdom:
phage

Quality

68.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 8-87
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3v3kD00 1.20.1260.90 Mainly Alpha › Up-down Bundle › Ferritin › 0.52 46.0 3.61e-01 97.5% 81.7%
3iibA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.51 42.0 2.96e-01 96.2% 82.2%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4997451 2011.1.1.6 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 0.57 43.0 3.00e-01 80.0% 92.4%
3672395 101.1.21.1 ↗ alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N 0.56 42.0 2.95e-01 80.0% 80.4%
3214509 2006.1.6.39 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Mat89Bb 0.55 39.0 2.75e-01 75.0% 27.2%
3412939 5001.1.1.41 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw 0.53 39.0 2.59e-01 80.0% 47.2%
3565952 2011.1.1.8 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 0.52 41.0 2.88e-01 88.7% 84.7%
5004772 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 33.0 3.29e-01 83.7% 61.1%