←Back to structures
sw_7_scaffold_1_prodigal-single.1__X__X__00163
Bact-Virsw_7_scaffold_1_prodigal-single.1__X__X__00163
Identity
- Kingdom:
- phage
Quality
85.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-23_41-106
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 45.0 | 5.78e-01 | 96.5% | 98.0% |
| 3udcA02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 44.0 | 5.45e-01 | 96.5% | 96.0% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 52.0 | 5.46e-01 | 76.7% | 88.3% |
| 7razA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 49.0 | 4.97e-01 | 87.2% | 72.9% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 44.0 | 4.90e-01 | 80.2% | 87.9% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 42.0 | 4.52e-01 | 96.5% | 76.4% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 43.0 | 4.71e-01 | 75.6% | 85.3% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 42.0 | 4.55e-01 | 90.7% | 81.2% |
| 2ldmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 38.0 | 4.61e-01 | 97.7% | 98.1% |
| 3gmgA00 | 3.30.70.1880 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function DUF881 | 0.62 | 47.0 | 4.05e-01 | 100.0% | 49.7% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 40.0 | 4.67e-01 | 73.3% | 96.6% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 38.0 | 4.29e-01 | 100.0% | 84.4% |
| 5kiqA02 | 3.10.20.890 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.61 | 42.0 | 4.49e-01 | 91.9% | 86.1% |
| 3oymA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 46.0 | 4.98e-01 | 98.8% | 100.0% |
| 3c6kA02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.60 | 37.0 | 4.32e-01 | 90.7% | 92.9% |
| 3teeA02 | 2.30.30.760 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 38.0 | 4.10e-01 | 72.1% | 76.7% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 41.0 | 4.61e-01 | 95.3% | 98.4% |
| 2dl5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 40.0 | 4.22e-01 | 70.9% | 79.5% |
| 4p5nA00 | 2.30.30.1060 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 43.0 | 4.66e-01 | 96.5% | 90.5% |
| 1ssfA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 37.0 | 4.37e-01 | 70.9% | 100.0% |
| 2dk3A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 45.0 | 4.58e-01 | 94.2% | 83.7% |
| 1rvjH02 | 3.90.50.10 | Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 | 0.58 | 41.0 | 3.55e-01 | 75.6% | 48.5% |
| 2akkA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 42.0 | 4.47e-01 | 93.0% | 91.9% |
| 6efaA02 | 3.10.20.890 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 43.0 | 4.50e-01 | 94.2% | 92.3% |
| 2x5cA01 | 3.30.70.3590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 41.0 | 4.12e-01 | 83.7% | 81.3% |
| 2oviA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.54 | 45.0 | 3.74e-01 | 95.3% | 62.7% |
| 2xfmA00 | 2.170.260.10 | Mainly Beta › Beta Complex › paz domain › paz domain | 0.53 | 45.0 | 4.06e-01 | 95.3% | 98.3% |
| 3b0xA03 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.53 | 37.0 | 3.46e-01 | 72.1% | 99.0% |
| 2hqvA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.53 | 45.0 | 3.70e-01 | 98.8% | 58.1% |
| 4c5wA01 | 3.30.2020.30 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › | 0.53 | 42.0 | 4.07e-01 | 87.2% | 99.0% |
| 3floB00 | 1.10.3200.20 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › DNA Polymerase alpha, zinc finger | 0.51 | 39.0 | 3.11e-01 | 83.7% | 95.0% |
| 1t3aA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.51 | 43.0 | 2.80e-01 | 94.2% | 52.0% |
| 4wjsA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 43.0 | 2.83e-01 | 95.3% | 26.6% |
ECOD (74)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5002601 | 4.1.1.485 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF6897 | 0.81 | 54.0 | 6.34e-01 | 89.5% | 100.0% |
| 858452 | 4.1.1.476 ↗ | beta barrels › SH3 › SH3 › SH3 › PF30873 | 0.78 | 52.0 | 4.98e-01 | 97.7% | 60.4% |
| 5018157 | 4.1.1.485 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF6897 | 0.78 | 53.0 | 6.19e-01 | 90.7% | 100.0% |
| 5056826 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.77 | 50.0 | 5.65e-01 | 97.7% | 87.7% |
| 135648 | 4.1.1.142 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq_1 | 0.77 | 52.0 | 5.84e-01 | 94.2% | 92.3% |
| 3839016 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.76 | 53.0 | 5.95e-01 | 100.0% | 96.9% |
| 4026431 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 52.0 | 5.86e-01 | 96.5% | 95.4% |
| 5080336 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 52.0 | 5.87e-01 | 94.2% | 96.9% |
| 4068333 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.74 | 54.0 | 6.04e-01 | 100.0% | 100.0% |
| 4157193 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.74 | 55.0 | 5.97e-01 | 100.0% | 95.7% |
| 4044269 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.73 | 53.0 | 5.78e-01 | 76.7% | 92.9% |
| 4071824 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.73 | 53.0 | 5.61e-01 | 75.6% | 92.0% |
| 4432457 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.73 | 54.0 | 5.84e-01 | 100.0% | 95.7% |
| 3989898 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.73 | 51.0 | 5.76e-01 | 86.0% | 96.9% |
| 4252954 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.73 | 54.0 | 5.83e-01 | 100.0% | 95.7% |
| 4093911 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.72 | 53.0 | 5.67e-01 | 100.0% | 89.3% |
| 4554867 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.71 | 50.0 | 5.66e-01 | 91.9% | 96.9% |
| 4277213 | 4.1.1.431 ↗ | beta barrels › SH3 › SH3 › SH3 › PF27152 | 0.71 | 51.0 | 5.61e-01 | 98.8% | 92.9% |
| 4120629 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.71 | 53.0 | 5.69e-01 | 100.0% | 92.0% |
| 4142364 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.70 | 48.0 | 5.42e-01 | 87.2% | 93.8% |
| 5077969 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 53.0 | 5.47e-01 | 91.9% | 85.0% |
| 4024913 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 43.0 | 4.86e-01 | 75.6% | 81.5% |
| 5050320 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.70 | 51.0 | 5.47e-01 | 76.7% | 88.0% |
| 5000741 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.70 | 48.0 | 5.39e-01 | 88.4% | 93.8% |
| 3737903 | 4.1.1.286 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7072 | 0.70 | 44.0 | 5.30e-01 | 87.2% | 100.0% |
| 4937178 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.70 | 48.0 | 5.38e-01 | 87.2% | 93.8% |
| 3278801 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.70 | 44.0 | 4.89e-01 | 94.2% | 83.1% |
| 5076401 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.70 | 48.0 | 5.31e-01 | 87.2% | 88.6% |
| 4944045 | 4.17.1.2 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › Asparaginase | 0.70 | 50.0 | 5.47e-01 | 75.6% | 94.3% |
| 4459365 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.70 | 52.0 | 5.43e-01 | 100.0% | 86.3% |
| 4971470 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.69 | 51.0 | 5.40e-01 | 76.7% | 88.0% |
| 4979291 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.69 | 51.0 | 5.37e-01 | 76.7% | 90.7% |
| 5015352 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 49.0 | 4.96e-01 | 97.7% | 75.9% |
| 4929875 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.69 | 47.0 | 4.53e-01 | 100.0% | 61.0% |
| 4968248 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.69 | 48.0 | 5.30e-01 | 87.2% | 90.0% |
| 4158712 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.69 | 48.0 | 5.27e-01 | 91.9% | 90.0% |
| 3290899 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.69 | 51.0 | 5.54e-01 | 87.2% | 95.7% |
| 2697704 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.69 | 47.0 | 5.24e-01 | 87.2% | 92.3% |
| 3673317 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 43.0 | 5.18e-01 | 73.3% | 100.0% |
| 3037102 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 41.0 | 4.77e-01 | 72.1% | 83.9% |
| 3277860 | 4.1.1.368 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3097_N | 0.68 | 44.0 | 4.93e-01 | 95.3% | 87.7% |
| 1263713 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.68 | 41.0 | 4.97e-01 | 91.9% | 100.0% |
| 4400642 | 4.1.1.257 ↗ | beta barrels › SH3 › SH3 › SH3 › Flag1_repress | 0.67 | 53.0 | 5.35e-01 | 83.7% | 100.0% |
| 4321173 | 4.1.1.98 ↗ | beta barrels › SH3 › SH3 › SH3 › ProQ_C | 0.67 | 43.0 | 5.07e-01 | 98.8% | 96.6% |
| 5025364 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.67 | 50.0 | 5.32e-01 | 87.2% | 90.7% |
| 4218142 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.67 | 43.0 | 4.14e-01 | 96.5% | 56.0% |
| 3741020 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 44.0 | 4.79e-01 | 97.7% | 82.9% |
| 4084190 | 4.1.1.98 ↗ | beta barrels › SH3 › SH3 › SH3 › ProQ_C | 0.66 | 43.0 | 4.97e-01 | 98.8% | 96.6% |
| 3588979 | 4.1.1.137 ↗ | beta barrels › SH3 › SH3 › SH3 › PcrA_UvrD_tudor | 0.66 | 43.0 | 4.99e-01 | 94.2% | 96.6% |
| 3502290 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 43.0 | 4.98e-01 | 90.7% | 96.7% |
| 3764432 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 41.0 | 4.64e-01 | 94.2% | 84.6% |
| 3901117 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.65 | 41.0 | 3.25e-01 | 94.2% | 30.6% |
| 3372243 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 48.0 | 5.02e-01 | 97.7% | 85.0% |
| 1031172 | 4.1.1.113 ↗ | beta barrels › SH3 › SH3 › SH3 › TraI_2B | 0.65 | 49.0 | 5.32e-01 | 100.0% | 97.2% |
| 4018596 | 4.1.1.320 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_CYT4 | 0.65 | 41.0 | 3.88e-01 | 90.7% | 54.0% |
| 5059830 | 4.7.1.0 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 | 0.65 | 54.0 | 5.38e-01 | 89.5% | 87.8% |
| 5038340 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.64 | 48.0 | 5.09e-01 | 87.2% | 90.7% |
| 3243143 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 45.0 | 5.05e-01 | 84.9% | 96.9% |
| 3510676 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 44.0 | 4.27e-01 | 90.7% | 64.2% |
| 3721973 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.64 | 49.0 | 5.17e-01 | 84.9% | 93.3% |
| 3533770 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.63 | 46.0 | 4.29e-01 | 86.0% | 61.9% |
| 5025204 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.63 | 51.0 | 5.05e-01 | 87.2% | 94.4% |
| 3917372 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.62 | 42.0 | 4.46e-01 | 91.9% | 80.0% |
| 3571487 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 48.0 | 5.14e-01 | 90.7% | 98.6% |
| 3300051 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.62 | 41.0 | 4.34e-01 | 76.7% | 77.3% |
| 2525277 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.62 | 41.0 | 4.67e-01 | 98.8% | 98.3% |
| 3584571 | 4.1.1.56 ↗ | beta barrels › SH3 › SH3 › SH3 › RBB1NT | 0.60 | 45.0 | 3.33e-01 | 81.4% | 34.0% |
| 3833030 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.56 | 48.0 | 4.19e-01 | 96.5% | 80.7% |
| 4185536 | 101.8.1.4 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › tRNA-synt_1f | 0.54 | 44.0 | 2.76e-01 | 98.8% | 15.1% |
| 3796759 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.54 | 43.0 | 4.17e-01 | 98.8% | 77.9% |
| 1068760 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.51 | 39.0 | 4.05e-01 | 100.0% | 88.5% |
| 4327595 | 4.1.1.402 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2761 | 0.51 | 41.0 | 4.06e-01 | 98.8% | 83.2% |
| 3409703 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.51 | 36.0 | 3.22e-01 | 100.0% | 50.8% |
| 3710260 | 5.1.3.244 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BBS2_N, BBS2_Mid | 0.50 | 42.0 | 2.81e-01 | 94.2% | 29.5% |