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sw_7_scaffold_1_prodigal-single.1__X__X__00178
Bact-Virsw_7_scaffold_1_prodigal-single.1__X__X__00178
Identity
- Kingdom:
- phage
Quality
78.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-50
Domain cluster:
rep: OR159664.1__WKW86055.1__SEA_JONJAMES_81__00075__D9-60
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cjsC01 | 3.30.60.120 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.81 | 62.0 | 6.55e-01 | 97.7% | 97.4% |
| 1zbdB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.79 | 61.0 | 4.39e-01 | 100.0% | 30.1% |
| 3d00A02 | 3.30.60.80 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.69 | 42.0 | 4.79e-01 | 100.0% | 90.0% |
| 2xjyA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.62 | 48.0 | 4.32e-01 | 100.0% | 60.3% |
| 4dg8A01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.59 | 47.0 | 2.83e-01 | 100.0% | 22.1% |
| 1yc5A02 | 3.30.1600.10 | Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' | 0.55 | 39.0 | 3.26e-01 | 97.7% | 40.5% |
| 8gq6A01 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.55 | 38.0 | 2.35e-01 | 75.0% | 88.9% |
| 1yhpA02 | 2.60.40.1720 | Mainly Beta › Sandwich › Immunoglobulin-like › Calcium-dependent cell adhesion molecule-1 | 0.53 | 39.0 | 3.10e-01 | 93.2% | 91.7% |
| 1c0gA03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.52 | 40.0 | 3.21e-01 | 88.6% | 71.7% |
| 3thxB04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.51 | 37.0 | 2.87e-01 | 86.4% | 48.4% |
| 6teyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 38.0 | 3.32e-01 | 86.4% | 84.9% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3372361 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.78 | 59.0 | 6.18e-01 | 100.0% | 92.5% |
| 3394910 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 54.0 | 5.89e-01 | 97.7% | 100.0% |
| 3634154 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.68 | 49.0 | 4.42e-01 | 100.0% | 53.8% |
| 3827873 | 376.1.3.11 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-HC5HC2H_2 | 0.67 | 56.0 | 4.06e-01 | 100.0% | 32.6% |
| 4013540 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.66 | 55.0 | 4.56e-01 | 100.0% | 68.2% |
| 3468663 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.66 | 58.0 | 5.82e-01 | 100.0% | 100.0% |
| 4966035 | 376.1.3.98 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › DUF7562 | 0.65 | 57.0 | 5.15e-01 | 100.0% | 73.3% |
| 4965882 | 375.1.1.344 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7836 | 0.64 | 45.0 | 4.20e-01 | 97.7% | 61.1% |
| 3634792 | 376.1.3.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-PHD-like | 0.64 | 53.0 | 4.40e-01 | 100.0% | 54.1% |
| 3719787 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 43.0 | 4.51e-01 | 100.0% | 82.5% |
| 4582514 | 375.1.1.50 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_4 | 0.62 | 43.0 | 4.47e-01 | 97.7% | 82.5% |
| 3200456 | 376.1.3.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-PHD-like | 0.59 | 52.0 | 3.69e-01 | 100.0% | 86.9% |
| 1148091 | 11.32.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Calcium-dependent cell adhesion molecule-1 C-terminal domain › Calcium-dependent cell adhesion molecule-1 C-terminal domain › Membrane_bind | 0.59 | 42.0 | 3.30e-01 | 84.1% | 92.4% |
| 5043484 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 38.0 | 3.83e-01 | 95.5% | 68.9% |
| 5013997 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 36.0 | 3.67e-01 | 81.8% | 64.4% |
| 4982253 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 36.0 | 3.78e-01 | 95.5% | 88.6% |
| 4583179 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 44.0 | 4.17e-01 | 97.7% | 89.1% |
| 4980605 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 38.0 | 3.85e-01 | 81.8% | 86.7% |
| 3616294 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.53 | 34.0 | 2.51e-01 | 70.5% | 23.2% |
| 5012277 | 101.1.2.904 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_38 | 0.52 | 42.0 | 3.61e-01 | 93.2% | 76.0% |
| 2581800 | 7523.1.1.52 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_3, Lig_chan-Glu_bd | 0.52 | 38.0 | 2.99e-01 | 88.6% | 33.3% |
| 4968628 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 36.0 | 3.76e-01 | 97.7% | 82.5% |
| 4282238 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 42.0 | 2.35e-01 | 100.0% | 22.6% |
| 3880055 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 37.0 | 2.84e-01 | 86.4% | 53.6% |
| 3716736 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 36.0 | 2.00e-01 | 79.5% | 62.1% |
| 3705148 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.50 | 35.0 | 3.58e-01 | 97.7% | 77.8% |
| 4669467 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.50 | 37.0 | 2.80e-01 | 86.4% | 46.2% |