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sw_7_scaffold_1_prodigal-single.1__X__X__00179

Bact-Vir

sw_7_scaffold_1_prodigal-single.1__X__X__00179

Identity

Kingdom:
phage

Quality

84.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-102
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ef2A02 3.30.460.70 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.65 36.0 3.22e-01 70.5% 37.0%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 35.0 4.25e-01 73.7% 100.0%
1pbyA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.60 42.0 4.07e-01 73.7% 97.2%
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 37.0 4.37e-01 85.3% 100.0%
2dhkA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 40.0 3.97e-01 73.7% 80.0%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 32.0 3.77e-01 70.5% 86.7%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 33.0 3.88e-01 71.6% 88.7%
7t8tA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 39.0 3.51e-01 72.6% 74.0%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.54 37.0 3.60e-01 100.0% 64.4%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.53 37.0 3.73e-01 73.7% 89.0%
3mh9A00 2.50.20.20 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.53 41.0 3.35e-01 87.4% 93.7%
4g2sA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.53 37.0 3.67e-01 74.7% 100.0%
1lf7A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 42.0 3.61e-01 91.6% 76.8%
1v5pA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 36.0 3.57e-01 72.6% 86.4%
5z5dA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 39.0 3.17e-01 84.2% 62.8%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 36.0 3.38e-01 74.7% 70.2%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3910727 4.1.1.353 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_TNRC18 0.68 41.0 4.68e-01 70.5% 86.2%
3751478 220.1.1.86 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.68 46.0 5.12e-01 70.5% 92.0%
3598462 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 44.0 4.06e-01 73.7% 72.0%
4547801 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 38.0 3.93e-01 74.7% 64.4%
3316079 220.1.1.183 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RDR2 0.62 43.0 3.74e-01 72.6% 85.3%
3592788 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 42.0 3.90e-01 72.6% 75.8%
3364063 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.57 43.0 3.83e-01 80.0% 87.9%
3958057 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 40.0 3.58e-01 71.6% 68.9%
3920675 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.57 39.0 4.33e-01 87.4% 90.7%
3986751 3197.1.1.0 ↗ a+b two layers › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 0.57 39.0 3.71e-01 70.5% 88.2%
3483806 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.57 40.0 3.44e-01 73.7% 90.7%
3905746 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.56 38.0 4.30e-01 87.4% 95.7%
3395948 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.56 32.0 3.92e-01 95.8% 96.4%
3469279 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 36.0 3.92e-01 98.9% 82.7%
3547089 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.54 35.0 3.57e-01 100.0% 66.7%
3457163 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.54 36.0 3.85e-01 98.9% 80.0%
4087011 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 38.0 3.81e-01 71.6% 71.6%
3899369 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.54 37.0 3.24e-01 71.6% 52.0%
3675857 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.53 40.0 3.27e-01 100.0% 41.1%
4497266 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.53 32.0 3.05e-01 71.6% 50.0%
1005587 73.1.1.5 ↗ beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › PrgH 0.53 37.0 3.67e-01 74.7% 100.0%
3215618 11.1.1.532 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C6 0.53 38.0 3.64e-01 82.1% 64.5%
4168737 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 34.0 3.79e-01 74.7% 83.8%
3485288 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.53 46.0 3.69e-01 100.0% 78.0%
3190430 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 36.0 3.00e-01 71.6% 47.0%
4141828 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.52 34.0 3.80e-01 95.8% 85.1%
3931993 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 32.0 3.70e-01 100.0% 95.0%
5046961 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.52 40.0 3.12e-01 82.1% 51.2%
4180663 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.52 32.0 2.98e-01 70.5% 47.2%
4108015 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.52 33.0 3.00e-01 72.6% 47.3%
5014673 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.51 38.0 4.03e-01 92.6% 92.5%
3554105 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.51 45.0 4.03e-01 100.0% 74.8%
3231008 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 39.0 3.40e-01 84.2% 69.7%
3233501 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.51 37.0 3.54e-01 97.9% 64.3%
4027723 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.51 33.0 3.75e-01 90.5% 90.0%
3215615 11.1.1.532 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C6 0.51 38.0 3.68e-01 86.3% 70.0%
3482073 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.51 31.0 3.70e-01 77.9% 96.7%