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sw_7_scaffold_1_prodigal-single.1__X__X__00263
Bact-Virsw_7_scaffold_1_prodigal-single.1__X__X__00263
Identity
- Kingdom:
- phage
Quality
89.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-69
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mtpA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.67 | 47.0 | 4.24e-01 | 98.5% | 53.8% |
| 3lxqA01 | 3.30.1120.80 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.65 | 48.0 | 4.30e-01 | 100.0% | 55.6% |
| 2vugA03 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.64 | 46.0 | 4.06e-01 | 77.6% | 96.1% |
| 2pvpA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.63 | 51.0 | 3.99e-01 | 89.6% | 62.3% |
| 3vmaA03 | 3.30.2060.10 | Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain | 0.61 | 42.0 | 3.80e-01 | 71.6% | 54.4% |
| 4qunA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.59 | 43.0 | 2.86e-01 | 77.6% | 98.6% |
| 3kreA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.58 | 47.0 | 3.83e-01 | 94.0% | 59.3% |
| 2v5gA00 | 3.40.1690.10 | Alpha Beta › 3-Layer(aba) Sandwich › name from scop › secretion proteins EscU | 0.58 | 49.0 | 4.02e-01 | 92.5% | 69.2% |
| 1k8iA01 | 3.10.320.10 | Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 | 0.56 | 45.0 | 4.37e-01 | 91.0% | 88.3% |
| 1jdpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 34.0 | 2.52e-01 | 89.6% | 23.5% |
| 2i7tA01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.54 | 41.0 | 2.82e-01 | 85.1% | 95.7% |
| 3bzvB00 | 3.40.1690.10 | Alpha Beta › 3-Layer(aba) Sandwich › name from scop › secretion proteins EscU | 0.53 | 42.0 | 4.00e-01 | 88.1% | 98.8% |
| 2v3aA03 | 3.30.390.120 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.53 | 32.0 | 3.25e-01 | 70.1% | 59.4% |
| 3lx7A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 34.0 | 3.78e-01 | 92.5% | 95.7% |
| 6krwA01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.53 | 46.0 | 2.99e-01 | 97.0% | 56.9% |
| 2jvnA00 | 3.90.640.80 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › | 0.52 | 35.0 | 2.96e-01 | 100.0% | 37.3% |
| 2dfkC02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 46.0 | 3.65e-01 | 100.0% | 83.0% |
| 1yreC00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 37.0 | 2.84e-01 | 79.1% | 37.9% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 34.0 | 2.78e-01 | 70.1% | 59.0% |
| 2j5uA03 | 2.40.10.350 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 | 0.51 | 38.0 | 3.67e-01 | 85.1% | 98.8% |
| 2rhqB05 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.50 | 36.0 | 2.64e-01 | 77.6% | 61.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 340177 | 4104.1.1.1 ↗ | beta sandwiches › EscU C-terminal domain-like › EscU C-terminal domain-like › EscU C-terminal domain-like › Bac_export_2 | 0.57 | 49.0 | 4.36e-01 | 94.0% | 89.4% |
| 4407693 | 2004.1.1.525 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23, AAA_27, SbcC_Walker_B | 0.55 | 47.0 | 3.07e-01 | 100.0% | 21.8% |
| 4190134 | 4104.1.1.1 ↗ | beta sandwiches › EscU C-terminal domain-like › EscU C-terminal domain-like › EscU C-terminal domain-like › Bac_export_2 | 0.55 | 44.0 | 4.11e-01 | 89.6% | 94.1% |
| 3286654 | 223.1.1.37 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Rv3651-like_N | 0.53 | 44.0 | 3.88e-01 | 92.5% | 83.0% |
| 5053309 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 43.0 | 3.44e-01 | 98.5% | 57.9% |
| 3877645 | 5001.1.1.3 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_2 | 0.51 | 39.0 | 2.63e-01 | 85.1% | 53.1% |
| 3277495 | 5.1.3.117 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 | 0.51 | 44.0 | 2.82e-01 | 100.0% | 55.4% |