sw_7_scaffold_1_prodigal-single.1XX__00275

Bact-Vir

sw_7_scaffold_1_prodigal-single.1__X__X__00275

Identity

69.4 mean pLDDT

Singleton — not in a non-trivial cluster

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 37-86

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1qusA01	1.10.8.350	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Bacterial muramidase	0.66	53.0	4.16e-01	92.0%	93.8%
2vk9A03	1.10.3730.30	Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold ›	0.66	44.0	3.61e-01	70.0%	40.8%
3cjlA00	3.10.20.850	Alpha Beta › Roll › Ubiquitin-like (UB roll) › Protein of unknown function DUF3861	0.61	47.0	4.00e-01	88.0%	63.6%
3ghaA00	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.55	45.0	3.16e-01	98.0%	33.3%
3un6A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.53	42.0	2.99e-01	100.0%	37.0%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4213366	1045.1.1.0 ↗	alpha bundles › Rad50-binding domain of Mre11 › Rad50-binding domain of Mre11 › Rad50-binding domain of Mre11	0.74	51.0	5.11e-01	72.0%	80.0%
3962466	2003.1.4.9 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2_2	0.60	46.0	2.82e-01	84.0%	43.7%
4662987	101.17.1.0 ↗	alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins	0.59	50.0	4.10e-01	98.0%	90.5%
5036473	102.1.1.0 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like	0.57	38.0	3.03e-01	72.0%	60.8%