←Back to structures
sw_7_scaffold_1_prodigal-single.1__X__X__00287
Bact-Virsw_7_scaffold_1_prodigal-single.1__X__X__00287
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-117
Domain cluster:
rep: S27_BME27_1069154_prodigal-single.1__X__X__00226__D46-145
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wjzA00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.61 | 35.0 | 3.81e-01 | 86.1% | 67.0% |
| 3p1uA00 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 52.0 | 3.41e-01 | 93.9% | 96.9% |
| 4i4cB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 51.0 | 3.59e-01 | 96.5% | 68.1% |
| 7e1lB01 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 41.0 | 3.49e-01 | 73.9% | 79.5% |
| 3lewA01 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 48.0 | 3.52e-01 | 89.6% | 91.0% |
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.56 | 38.0 | 3.85e-01 | 84.3% | 69.6% |
| 1jt6A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 39.0 | 3.73e-01 | 88.7% | 64.2% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 43.0 | 4.10e-01 | 87.0% | 89.3% |
| 1ldjA03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.53 | 37.0 | 3.73e-01 | 91.3% | 71.3% |
| 4xaiB02 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.53 | 42.0 | 3.51e-01 | 83.5% | 91.3% |
| 1m5iA00 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.53 | 29.0 | 3.08e-01 | 80.0% | 58.1% |
| 3szpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 36.0 | 4.04e-01 | 87.8% | 92.1% |
| 2vvwA00 | 1.10.437.20 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus | 0.52 | 37.0 | 3.43e-01 | 73.0% | 63.3% |
| 3fnbA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.52 | 37.0 | 3.73e-01 | 95.7% | 73.7% |
| 4l7aA00 | 3.40.390.70 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › | 0.52 | 44.0 | 3.32e-01 | 89.6% | 43.7% |
| 3fm5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 38.0 | 3.73e-01 | 81.7% | 88.5% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3781958 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.58 | 38.0 | 3.45e-01 | 94.8% | 49.0% |
| 3931221 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.56 | 46.0 | 4.05e-01 | 86.1% | 81.2% |
| 3608391 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.56 | 44.0 | 4.10e-01 | 83.5% | 85.5% |
| 5054405 | 606.1.1.1 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop | 0.56 | 32.0 | 3.44e-01 | 89.6% | 65.0% |
| 3594350 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.55 | 43.0 | 3.29e-01 | 83.5% | 50.0% |
| 4378877 | 3711.1.1.20 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › DUF444 | 0.55 | 26.0 | 3.17e-01 | 84.3% | 68.0% |
| 3283002 | 601.1.1.82 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › DUF8318 | 0.53 | 45.0 | 4.16e-01 | 95.7% | 87.3% |
| 3490734 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 45.0 | 3.53e-01 | 96.5% | 79.2% |
| 3480799 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.52 | 42.0 | 4.04e-01 | 87.0% | 89.6% |
| 3704522 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 41.0 | 4.12e-01 | 89.6% | 84.3% |
| 3980834 | 180.1.1.1 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2 | 0.52 | 40.0 | 3.36e-01 | 81.7% | 69.5% |
| 4223269 | 101.1.10.50 ↗ | alpha arrays › HTH › HTH › Cyclin-like › PF29928 | 0.52 | 42.0 | 3.77e-01 | 87.0% | 73.8% |
| 5024540 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.52 | 40.0 | 3.78e-01 | 84.3% | 89.0% |
| 3319170 | 101.26.1.0 ↗ | alpha arrays › HTH › Tex N-terminal domain › Tex N-terminal domain | 0.51 | 36.0 | 3.40e-01 | 72.2% | 78.6% |
| 1325040 | 109.41.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Ribosomal protein S12 methylthiotransferase accessory factor YcaO C-terminal domain › Ribosomal protein S12 methylthiotransferase accessory factor YcaO C-terminal domain › YcaO_C | 0.51 | 37.0 | 3.30e-01 | 78.3% | 82.6% |
| 3623067 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 41.0 | 3.00e-01 | 89.6% | 42.1% |
| 3480768 | 101.1.1.286 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF27813 | 0.50 | 30.0 | 3.18e-01 | 88.7% | 64.8% |