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sw_7_scaffold_1_prodigal-single.1__X__X__00380
Bact-Virsw_7_scaffold_1_prodigal-single.1__X__X__00380
Identity
- Kingdom:
- phage
Quality
74.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-142
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1i1iP02 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.64 | 44.0 | 4.10e-01 | 70.0% | 89.4% |
| 3g7pA00 | 1.10.3100.20 | Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Protein of unknown function DUF269 | 0.64 | 44.0 | 4.16e-01 | 70.0% | 71.0% |
| 6nhiA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.54 | 32.0 | 3.72e-01 | 71.7% | 83.3% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 29.0 | 3.71e-01 | 71.7% | 100.0% |
| 2ymsC00 | 2.40.10.480 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.52 | 33.0 | 3.92e-01 | 80.0% | 100.0% |
| 2q7eA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.52 | 39.0 | 3.22e-01 | 77.5% | 62.3% |
| 4h5iB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 42.0 | 3.07e-01 | 90.0% | 87.2% |
| 3gf8A02 | 2.60.40.2090 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 35.0 | 3.51e-01 | 70.8% | 100.0% |
| 4i8oA02 | 3.30.160.690 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain | 0.51 | 29.0 | 3.25e-01 | 70.0% | 71.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4991489 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.66 | 38.0 | 4.90e-01 | 74.2% | 98.6% |
| 4352332 | 3283.1.1.1 ↗ | a+b two layers › Nitrogen fixation protein › Nitrogen fixation protein › Nitrogen fixation protein › DUF269 | 0.65 | 45.0 | 4.26e-01 | 70.0% | 75.7% |
| 394896 | 3283.1.1.1 ↗ | a+b two layers › Nitrogen fixation protein › Nitrogen fixation protein › Nitrogen fixation protein › DUF269 | 0.61 | 44.0 | 4.11e-01 | 75.0% | 93.4% |
| 3257782 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 35.0 | 3.92e-01 | 79.2% | 78.7% |
| 3594326 | 241.10.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain | 0.58 | 33.0 | 3.91e-01 | 71.7% | 83.7% |
| 3930705 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.56 | 38.0 | 4.10e-01 | 70.0% | 93.0% |
| 3961733 | 330.10.1.0 ↗ | a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain | 0.56 | 38.0 | 4.24e-01 | 75.0% | 92.2% |
| 3498911 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.54 | 37.0 | 4.03e-01 | 79.2% | 85.7% |
| 4059727 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.52 | 37.0 | 3.42e-01 | 75.8% | 89.1% |
| 4677382 | 5.1.5.75 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, ANAPC4_WD40 | 0.50 | 43.0 | 3.01e-01 | 95.8% | 97.7% |
| 1179012 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.50 | 31.0 | 3.36e-01 | 71.7% | 72.3% |
| 5014183 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.50 | 29.0 | 3.35e-01 | 70.8% | 76.7% |