taf_protein

Euk-Vir

Simian_foamy_virus

taf_protein__NP_056805__Simian_foamy_virus__11642

Identity

52.9 mean pLDDT

Pararnavirae› Artverviricota› Revtraviricetes› Ortervirales› Retroviridae› Simian_foamy_virus

TaxID: 11642

View cluster (8 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 60-210

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03274.20 best	Foamy_BEL	121.2	7.90e-35	51.7%	31.2%
PF03274.20	Foamy_BEL	108.3	6.80e-31	51.0%	37.9%

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3tdgA01	3.10.450.520	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.56	26.0	3.68e-01	74.8%	97.0%
1ylxA00	3.30.70.1480	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like	0.56	36.0	4.30e-01	80.1%	100.0%
4r80A00	3.10.450.630	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.55	30.0	3.85e-01	72.8%	98.7%
1qwdB00	2.40.128.20	Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain	0.55	35.0	3.45e-01	70.2%	56.6%
4cy8A01	3.50.50.60	Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain	0.53	40.0	3.44e-01	80.1%	87.4%
6ka3A01	3.30.530.20	Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain	0.53	31.0	3.19e-01	74.8%	58.5%
1dfvA00	2.40.128.20	Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain	0.51	36.0	3.46e-01	72.2%	68.2%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4397221	325.1.7.0 ↗	a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif	0.57	24.0	3.52e-01	74.2%	89.2%
842	9.1.1.11 ↗	beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2	0.56	35.0	3.43e-01	72.8%	56.3%
3407007	9.1.1.0 ↗	beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins	0.54	34.0	3.30e-01	71.5%	53.5%
3618896	12.1.1.0 ↗	beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain	0.54	25.0	3.60e-01	82.8%	100.0%
2080862	5.1.4.36 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N	0.52	41.0	3.59e-01	84.8%	59.5%
3279695	243.1.1.68 ↗	a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF8175	0.52	40.0	3.80e-01	80.1%	74.3%
3175939	5.1.3.115 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_ATRN-LZTR1	0.51	39.0	2.90e-01	81.5%	43.3%
3549045	330.1.1.1 ↗	a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm	0.50	28.0	3.20e-01	75.5%	72.7%