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tail_fiber_protein

Euk-Vir

Phaeocystis_globosa_virus

tail_fiber_protein__YP_008052358__Phaeocystis_globosa_virus__251749

Identity

Accession:: YP_008052358 ↗
Protein ID:: tail_fiber_protein
Kingdom:: euk

Quality

70.2 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Prymnesiovirus› Phaeocystis_globosa_virus

TaxID: 251749

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-68

PDB

D2 high residues 198-297

PDB

Domain cluster: rep: MW073017.1__QPB08539.1__X__00060__D1038-1127

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF13884.12 best	Peptidase_S74	28.1	2.80e-06	58.0%	70.7%

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3gw6D02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.70	62.0	5.26e-01	96.0%	85.1%
2zdiB00	1.10.287.370	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.55	40.0	4.02e-01	96.0%	74.5%
4ntdA01	3.50.50.60	Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain	0.54	43.0	3.46e-01	88.0%	96.6%
1fxkB00	1.10.287.370	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.53	42.0	4.10e-01	95.0%	78.0%
1fxkC00	1.10.287.370	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.52	45.0	4.11e-01	95.0%	81.2%
3ry7A00	3.40.1190.20	Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase	0.52	40.0	2.88e-01	82.0%	86.8%
6tdxG01	3.40.1380.10	Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › ATP synthase, F1 complex, gamma subunit	0.50	46.0	3.55e-01	99.0%	95.8%
2zdiC00	1.10.287.370	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.50	45.0	3.91e-01	98.0%	81.8%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3275547	3240.1.1.1 ↗	alpha arrays › Intramolecular chaperone domain in virus tail spike protein › Intramolecular chaperone domain in virus tail spike protein › Intramolecular chaperone domain in virus tail spike protein › Peptidase_S74	0.76	58.0	5.65e-01	80.0%	82.7%
3995550	277.1.1.1 ↗	a+b two layers › PX domain › PX domain › PX domain › PX	0.69	29.0	2.91e-01	92.0%	39.0%
3485296	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.57	40.0	3.99e-01	96.0%	68.6%
3413217	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.57	45.0	4.33e-01	95.0%	73.9%
4028685	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.56	44.0	4.32e-01	95.0%	77.3%
4681355	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.56	45.0	4.24e-01	97.0%	71.7%
4536899	242.1.1.1 ↗	a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1	0.55	43.0	3.90e-01	87.0%	68.3%
3228583	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.53	42.0	4.08e-01	95.0%	73.9%
3574242	2004.1.1.17 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head	0.53	40.0	2.42e-01	81.0%	88.3%
2625538	2003.6.1.1 ↗	a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB	0.52	40.0	2.81e-01	82.0%	83.3%
4867072	2485.3.1.8 ↗	a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › P22_CoatProtein	0.51	35.0	2.78e-01	70.0%	67.0%
4017372	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.51	41.0	3.92e-01	95.0%	74.8%
3859550	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.51	43.0	4.03e-01	100.0%	75.0%

D3 medium residues 127-197

PDB