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tegument_host_shutoff_protein
Euk-VirHuman_alphaherpesvirus_3
tegument_host_shutoff_protein__NP_040140__Human_alphaherpesvirus_3__10335
Identity
- Accession:
- NP_040140 ↗
- Protein ID:
- tegument_host_shutoff_protein
- Kingdom:
- euk
Quality
71.7
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Varicellovirus›
Human_alphaherpesvirus_3
TaxID: 10335
Cluster
View cluster (65 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-77
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6sziB01 | 3.20.20.470 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glucansucrase | 0.58 | 43.0 | 2.75e-01 | 79.2% | 84.8% |
| 3ay5A01 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.54 | 39.0 | 3.29e-01 | 76.6% | 89.5% |
| 1w0bA01 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.52 | 38.0 | 3.61e-01 | 77.9% | 68.5% |
| 7zs9F01 | 3.90.940.10 | Alpha Beta › Alpha-Beta Complex › Eukaryotic RPB6 RNA polymerase subunit › RNA polymerase subunit, RPB6/omega | 0.52 | 38.0 | 3.53e-01 | 79.2% | 84.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4635599 | 230.3.1.1 ↗ | a+b two layers › T-fold › Elongation factor Ts (EF-Ts), dimerisation domain › Elongation factor Ts (EF-Ts), dimerisation domain › EF_TS | 0.66 | 46.0 | 3.82e-01 | 72.7% | 60.0% |
| 3029917 | 2002.1.1.92 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_70 | 0.58 | 45.0 | 3.09e-01 | 80.5% | 36.4% |
| 3376652 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.52 | 38.0 | 3.48e-01 | 85.7% | 59.0% |
| 3238459 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.51 | 29.0 | 3.16e-01 | 96.1% | 67.7% |
| 3547329 | 101.1.1.21 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 | 0.51 | 35.0 | 3.40e-01 | 96.1% | 64.7% |
D2
medium
residues 273-305_351-392