←Back to structures
tegument_host_shutoff_protein
Euk-VirSpheniscid_alphaherpesvirus_1
tegument_host_shutoff_protein__YP_009342362__Spheniscid_alphaherpesvirus_1__2560777
Identity
- Accession:
- YP_009342362 ↗
- Protein ID:
- tegument_host_shutoff_protein
- Kingdom:
- euk
Quality
69.8
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Mardivirus›
Spheniscid_alphaherpesvirus_1
TaxID: 2560777
Cluster
View cluster (65 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-23_226-272_408-451
Domain cluster:
rep: UL41__YP_003084380__Anatid_alphaherpesvirus_1__104388__D1-19_276-318_395-445
D2
medium
residues 24-103_156-225_452-504
Domain cluster:
rep: Hypothetical_protein_SPPV_50__NP_659626__Sheeppox_virus__10266__D1-82_143-236
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00867.24 best | XPG_I | 25.1 | 2.50e-05 | 24.6% | 46.6% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5v07Z01 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.74 | 54.0 | 5.43e-01 | 73.9% | 85.9% |
| 2iyeA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.56 | 36.0 | 4.09e-01 | 70.0% | 83.4% |
| 2zosB01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.56 | 39.0 | 4.32e-01 | 70.0% | 100.0% |
| 3kl2F00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.55 | 39.0 | 3.98e-01 | 71.9% | 97.5% |
| 3ot4A00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.53 | 37.0 | 3.82e-01 | 70.4% | 91.4% |
| 3lloA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.52 | 28.0 | 3.38e-01 | 96.1% | 78.0% |
| 3hwwA01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.52 | 40.0 | 4.06e-01 | 80.3% | 96.1% |
| 4dgfA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.52 | 29.0 | 3.63e-01 | 97.0% | 89.3% |
| 3lqkA00 | 3.40.50.1950 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like | 0.51 | 37.0 | 3.78e-01 | 73.4% | 95.4% |
| 3mbdA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.50 | 36.0 | 3.10e-01 | 72.9% | 92.9% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3743690 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.81 | 55.0 | 6.00e-01 | 73.9% | 80.6% |
| 5044998 | 2006.1.4.25 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I | 0.79 | 58.0 | 5.78e-01 | 73.9% | 87.3% |
| 3520565 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.79 | 57.0 | 5.42e-01 | 73.9% | 87.7% |
| 3849870 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.78 | 58.0 | 5.29e-01 | 75.9% | 75.8% |
| 3560378 | 2006.1.4.19 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N | 0.78 | 58.0 | 4.97e-01 | 75.9% | 68.5% |
| 3514116 | 2006.1.4.34 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N, XPG_I_2 | 0.78 | 57.0 | 5.29e-01 | 74.9% | 82.0% |
| 3781390 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.78 | 57.0 | 5.58e-01 | 73.9% | 84.2% |
| 3906677 | 2006.1.4.34 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N, XPG_I_2 | 0.78 | 58.0 | 5.37e-01 | 76.4% | 77.2% |
| 3498626 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.77 | 57.0 | 5.22e-01 | 75.4% | 81.6% |
| 4031817 | 2006.1.4.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N | 0.77 | 55.0 | 6.01e-01 | 72.4% | 94.1% |
| 3599611 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.77 | 58.0 | 5.05e-01 | 76.4% | 84.2% |
| 3478853 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.77 | 57.0 | 5.27e-01 | 75.4% | 85.2% |
| 3283240 | 2006.1.4.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N | 0.77 | 56.0 | 5.72e-01 | 73.9% | 91.3% |
| 3607366 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.76 | 57.0 | 4.92e-01 | 76.4% | 83.0% |
| 3937112 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.76 | 58.0 | 5.25e-01 | 77.8% | 92.3% |
| 3471700 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.75 | 55.0 | 5.26e-01 | 74.9% | 80.4% |
| 3613309 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.75 | 55.0 | 5.26e-01 | 73.9% | 84.0% |
| 4028436 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.74 | 55.0 | 5.08e-01 | 75.9% | 74.1% |
| 3784928 | 2006.1.4.32 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N, MKT1_N | 0.74 | 55.0 | 5.17e-01 | 76.4% | 84.9% |
| 3272525 | 2006.1.4.28 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › MKT1_N | 0.73 | 55.0 | 5.04e-01 | 77.3% | 86.7% |
| 3416420 | 2006.1.4.52 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PF27698 | 0.72 | 62.0 | 4.49e-01 | 89.2% | 74.3% |
| 3718959 | 2006.1.4.5 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XRN_N | 0.71 | 51.0 | 4.90e-01 | 72.9% | 91.7% |
| 3610118 | 2006.1.4.46 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N, XPG_I, XPG_I_2 | 0.70 | 60.0 | 5.31e-01 | 89.2% | 93.3% |
| 3744737 | 2006.1.4.29 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN-like_DDX60 | 0.69 | 51.0 | 4.89e-01 | 73.9% | 78.7% |
| 3893248 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.69 | 57.0 | 4.17e-01 | 87.2% | 84.8% |
| 4324598 | 2006.1.4.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N | 0.69 | 57.0 | 6.03e-01 | 96.1% | 95.1% |
| 3335892 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.68 | 58.0 | 5.11e-01 | 87.7% | 93.2% |
| 3868746 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.68 | 57.0 | 4.83e-01 | 87.7% | 88.1% |
| 3964138 | 2006.1.4.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N | 0.67 | 57.0 | 6.05e-01 | 94.6% | 100.0% |
| 4299585 | 2006.1.4.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N | 0.66 | 57.0 | 6.02e-01 | 97.5% | 98.9% |
| 3716209 | 2006.1.4.5 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XRN_N | 0.66 | 59.0 | 4.80e-01 | 94.6% | 92.0% |
| 3472483 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.62 | 59.0 | 5.04e-01 | 100.0% | 90.3% |
| 3710018 | 2006.1.4.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N | 0.62 | 57.0 | 5.61e-01 | 96.6% | 99.5% |
| 3581443 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.60 | 57.0 | 4.89e-01 | 99.0% | 93.8% |
| 3203047 | 2006.1.4.29 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN-like_DDX60 | 0.59 | 52.0 | 5.20e-01 | 92.6% | 91.4% |
| 3285575 | 7561.1.1.1 ↗ | a/b three-layered sandwiches › Isochorismatase-like hydrolases › Isochorismatase-like hydrolases › Isochorismatase-like hydrolases › Isochorismatase | 0.55 | 39.0 | 3.84e-01 | 72.4% | 92.0% |
| 4949103 | 7583.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in AF1104-like proteins › Rossmann-like domain in AF1104-like proteins › Rossmann-like domain in AF1104-like proteins › ARMT1-like_dom | 0.55 | 38.0 | 3.37e-01 | 72.4% | 50.4% |
| 3284675 | 7561.1.1.1 ↗ | a/b three-layered sandwiches › Isochorismatase-like hydrolases › Isochorismatase-like hydrolases › Isochorismatase-like hydrolases › Isochorismatase | 0.55 | 38.0 | 3.95e-01 | 70.4% | 97.4% |
| 3635160 | 7561.1.1.1 ↗ | a/b three-layered sandwiches › Isochorismatase-like hydrolases › Isochorismatase-like hydrolases › Isochorismatase-like hydrolases › Isochorismatase | 0.53 | 38.0 | 3.59e-01 | 71.9% | 90.6% |
| 5072215 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.53 | 38.0 | 3.80e-01 | 73.9% | 97.7% |
| 3283061 | 2006.1.4.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN | 0.52 | 42.0 | 4.46e-01 | 89.7% | 97.7% |