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tegument_protein_UL21

Euk-Vir

Equid_alphaherpesvirus_9

tegument_protein_UL21__YP_002333522__Equid_alphaherpesvirus_9__55744

Identity

Accession:: YP_002333522 ↗
Protein ID:: tegument_protein_UL21
Kingdom:: euk

Quality

78.7 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Varicellovirus› Equid_alphaherpesvirus_9

TaxID: 55744

Cluster

View cluster (29 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 388-498

PDB

Domain cluster: rep: tegument_protein_UL21__YP_009252265__Canid_alphaherpesvirus_1__170325__D384-522

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03252.19 best	Herpes_UL21	25.7	6.70e-06	100.0%	20.6%

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1w0bA01	1.20.58.420	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP	0.79	35.0	3.85e-01	72.1%	51.1%
1x3aA00	1.10.3970.10	Mainly Alpha › Orthogonal Bundle › BSD domain-like fold › BSD domain	0.60	43.0	4.49e-01	74.8%	85.0%
1rt8A04	1.10.418.10	Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain	0.56	33.0	3.42e-01	95.5%	58.7%
4w8pA02	1.20.120.230	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like	0.55	40.0	3.84e-01	84.7%	64.6%
3lcnB00	1.10.340.40	Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain	0.54	43.0	4.54e-01	84.7%	96.9%
1wvtA00	1.20.1200.10	Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like	0.54	37.0	3.43e-01	70.3%	80.4%
4nooB00	1.10.8.1160	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.54	36.0	3.92e-01	84.7%	81.1%
3fhnA02	1.20.58.1420	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain B	0.54	29.0	2.91e-01	72.1%	47.9%
5jcpB01	1.10.555.10	Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein	0.52	38.0	3.16e-01	75.7%	87.7%
3daxB00	1.10.630.10	Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450	0.51	45.0	3.02e-01	99.1%	70.9%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3920202	601.16.1.15 ↗	alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › CRIC_ras_sig	0.58	38.0	3.58e-01	86.5%	52.9%
4937418	4156.1.1.6 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc	0.57	46.0	4.12e-01	89.2%	89.7%
3538468	110.1.1.1 ↗	alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death	0.57	49.0	4.85e-01	99.1%	90.7%
3903423	632.15.1.0 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN)	0.56	36.0	3.75e-01	83.8%	69.5%
3412885	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.55	32.0	4.04e-01	96.4%	100.0%
5056000	4156.1.1.6 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc	0.54	43.0	4.01e-01	89.2%	86.0%
4045754	110.1.1.18 ↗	alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death_Lrrd1	0.54	45.0	4.67e-01	95.5%	98.1%
3959053	2008.1.1.0 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like	0.54	44.0	3.76e-01	89.2%	80.5%
4309485	4229.1.1.2 ↗	alpha bundles › Indolic compounds 2,3-dioxygenase-like › Indolic compounds 2,3-dioxygenase-like › Indolic compounds 2,3-dioxygenase-like › Trp_dioxygenase	0.54	40.0	2.84e-01	78.4%	58.3%
4936653	4156.1.1.6 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc	0.53	42.0	3.89e-01	86.5%	85.5%
4956043	212.1.1.3 ↗	a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › GHMP_kinases_N	0.53	36.0	3.57e-01	70.3%	65.0%
3210252	589.1.1.9 ↗	alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SAE2	0.50	38.0	4.14e-01	91.9%	100.0%
3471667	524.1.1.0 ↗	alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p	0.50	34.0	2.93e-01	71.2%	57.9%

D2 medium residues 1-50_174-258

PDB

D3 medium residues 51-173

PDB

Domain cluster: rep: tegument_protein_UL21__YP_182374__Gallid_alphaherpesvirus_1__10386__D52-162

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03252.19 best	Herpes_UL21	127.3	1.10e-36	100.0%	23.7%

D4 medium residues 259-387_499-530

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03252.19 best	Herpes_UL21	87.1	1.70e-24	85.1%	24.6%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2l0rA00	3.40.390.10	Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain)	0.51	32.0	3.75e-01	91.9%	91.5%
4bmoA00	1.10.620.20	Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A	0.51	42.0	3.50e-01	88.8%	93.4%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5045805	5059.1.1.1 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA	0.53	38.0	3.16e-01	72.7%	96.6%