tegument_protein_UL21

Euk-Vir

Columbid_alphaherpesvirus_1

tegument_protein_UL21__YP_009352927__Columbid_alphaherpesvirus_1__93386

Identity

76.1 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Mardivirus› Columbid_alphaherpesvirus_1

TaxID: 93386

View cluster (29 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 300-414

PDB

Domain cluster: rep: tegument_protein_UL21__YP_009361917__Ateline_alphaherpesvirus_1__35243__D279-385

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03252.19 best	Herpes_UL21	67.5	1.50e-18	100.0%	21.4%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1yw0A00	1.20.58.480	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.54	42.0	3.26e-01	80.9%	82.7%
1sk7A00	1.20.910.10	Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like	0.52	39.0	3.37e-01	80.9%	67.9%
3piwA00	1.20.1250.10	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; ›	0.52	39.0	3.61e-01	81.7%	81.8%
4i5lB01	1.10.238.230	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 ›	0.50	34.0	3.67e-01	70.4%	80.0%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3806243	4156.1.1.4 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C	0.57	48.0	4.14e-01	91.3%	80.0%
3499194	4193.1.1.1 ↗	alpha arrays › RUN domain › RUN domain › RUN domain › RUN	0.54	42.0	3.69e-01	88.7%	55.4%
4971416	4156.1.1.0 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like	0.52	42.0	3.87e-01	87.8%	77.3%
5005281	4156.1.1.6 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc	0.51	42.0	3.90e-01	90.4%	77.3%
5047905	4156.1.1.6 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc	0.51	41.0	3.83e-01	88.7%	78.7%
4110524	4979.2.1.1 ↗	alpha arrays › C-terminal domain of Hypothetical protein MPN330-like › XRN2-binding domain (XTBD) › XRN2-binding domain (XTBD) › XTBD	0.51	30.0	3.31e-01	78.3%	70.5%
4017157	150.1.1.0 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin	0.50	37.0	3.36e-01	78.3%	86.1%

D2 high residues 416-550

PDB

Domain cluster: rep: tegument_protein_UL21__YP_009252265__Canid_alphaherpesvirus_1__170325__D384-522

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03252.19 best	Herpes_UL21	40.8	1.90e-10	94.8%	23.7%

D3 medium residues 1-54_171-197_214-232_270-283

PDB

Domain cluster: rep: tegument_protein_UL21__YP_443867__Papiine_alphaherpesvirus_2__340907__D1-51_171-191_209-225

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03252.19 best	Herpes_UL21	67.3	1.70e-18	49.1%	10.1%
PF03252.19	Herpes_UL21	25.2	9.60e-06	42.1%	9.2%

D4 medium residues 55-113

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03252.19 best	Herpes_UL21	58.4	8.50e-16	100.0%	10.7%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4929297	101.1.4.3 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3	0.57	39.0	3.77e-01	72.9%	80.0%

D5 medium residues 114-170

PDB

Domain cluster: rep: tegument_protein_UL21__NP_944418__Psittacid_alphaherpesvirus_1__50294__D116-175

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03252.19 best	Herpes_UL21	40.6	2.10e-10	100.0%	10.9%