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tegument_protein_UL21
Euk-VirAteline_alphaherpesvirus_1
tegument_protein_UL21__YP_009361917__Ateline_alphaherpesvirus_1__35243
Identity
- Accession:
- YP_009361917 ↗
- Protein ID:
- tegument_protein_UL21
- Kingdom:
- euk
Quality
78.9
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Simplexvirus›
Ateline_alphaherpesvirus_1
TaxID: 35243
Cluster
View cluster (29 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 279-385
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03252.19 best | Herpes_UL21 | 58.5 | 8.20e-16 | 100.0% | 20.2% |
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6mh4A03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.59 | 32.0 | 3.61e-01 | 73.8% | 68.4% |
| 2iw3A02 | 1.20.1390.20 | Mainly Alpha › Up-down Bundle › PWI domain › | 0.56 | 33.0 | 3.57e-01 | 75.7% | 67.8% |
| 7lb8B01 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.56 | 41.0 | 2.95e-01 | 77.6% | 79.8% |
| 2yguC00 | 1.10.238.190 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.55 | 44.0 | 4.29e-01 | 86.9% | 79.7% |
| 7uzqK01 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.54 | 44.0 | 3.11e-01 | 90.7% | 80.6% |
| 1i5nB00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.54 | 34.0 | 3.30e-01 | 80.4% | 54.8% |
| 1aepA00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.51 | 42.0 | 3.81e-01 | 90.7% | 93.5% |
| 3cz1A00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.51 | 39.0 | 3.80e-01 | 86.0% | 74.4% |
| 1b5lA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.51 | 36.0 | 3.21e-01 | 72.9% | 66.4% |
| 2xtzA02 | 1.10.400.10 | Mainly Alpha › Orthogonal Bundle › GI Alpha 1, domain 2-like › GI Alpha 1, domain 2-like | 0.51 | 40.0 | 3.87e-01 | 93.5% | 74.6% |
| 2rsvA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.51 | 36.0 | 2.49e-01 | 74.8% | 21.3% |
| 4m70I00 | 1.20.5.4130 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.51 | 35.0 | 3.49e-01 | 78.5% | 69.4% |
| 1ucvA00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.50 | 33.0 | 3.66e-01 | 81.3% | 87.7% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4034270 | 632.19.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 | 0.56 | 35.0 | 3.96e-01 | 74.8% | 83.7% |
| 4524887 | 3352.1.1.19 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › Mannosyl_trans2 | 0.55 | 46.0 | 3.05e-01 | 90.7% | 97.4% |
| 4031489 | 632.19.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 | 0.54 | 32.0 | 3.75e-01 | 72.0% | 84.0% |
| 3806243 | 4156.1.1.4 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C | 0.53 | 45.0 | 3.85e-01 | 96.3% | 80.0% |
| 3784422 | 191.1.1.6 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › COQ9 | 0.52 | 37.0 | 3.42e-01 | 73.8% | 80.0% |
| 3756 | 601.20.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipophorin-III › Apolipophorin-III | 0.51 | 42.0 | 3.81e-01 | 90.7% | 93.5% |
| 4020948 | 611.9.1.0 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain | 0.51 | 36.0 | 3.56e-01 | 84.1% | 67.0% |
| 4939361 | 3896.1.2.0 ↗ | alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-archaeol synthase | 0.51 | 37.0 | 3.33e-01 | 74.8% | 72.0% |
| 4944733 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.50 | 42.0 | 3.39e-01 | 91.6% | 86.2% |
D2
high
residues 387-528
Domain cluster:
rep: tegument_protein_UL21__YP_009252265__Canid_alphaherpesvirus_1__170325__D384-522
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03252.19 best | Herpes_UL21 | 71.0 | 1.30e-19 | 91.5% | 24.8% |
D3
medium
residues 1-53_172-194_215-230
Domain cluster:
rep: tegument_protein_UL21__YP_443867__Papiine_alphaherpesvirus_2__340907__D1-51_171-191_209-225
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03252.19 best | Herpes_UL21 | 74.2 | 1.40e-20 | 58.7% | 9.9% |
D4
medium
residues 54-171
Domain cluster:
rep: tegument_protein_UL21__YP_182374__Gallid_alphaherpesvirus_1__10386__D52-162
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03252.19 best | Herpes_UL21 | 105.7 | 3.90e-30 | 100.0% | 22.3% |