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tegument_protein_UL25
Euk-VirAotine_betaherpesvirus_1
tegument_protein_UL25__YP_004940051__Aotine_betaherpesvirus_1__50290
Identity
- Accession:
- YP_004940051 ↗
- Protein ID:
- tegument_protein_UL25
- Kingdom:
- euk
Quality
64.2
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Cytomegalovirus›
Aotine_betaherpesvirus_1
TaxID: 50290
Cluster
View cluster (28 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 247-382
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04637.17 best | Herpes_pp85 | 22.9 | 3.60e-05 | 90.4% | 14.4% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6c1qB02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.60 | 49.0 | 3.91e-01 | 87.5% | 91.8% |
| 2qupA00 | 1.20.120.490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hypothetical protein TM1646-like domain | 0.57 | 32.0 | 3.45e-01 | 87.5% | 63.0% |
| 6xz3A01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.55 | 34.0 | 3.65e-01 | 88.2% | 71.8% |
| 4p9tA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.55 | 34.0 | 3.61e-01 | 91.2% | 70.0% |
| 5u56A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 32.0 | 3.49e-01 | 84.6% | 70.5% |
| 1oyjB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 33.0 | 3.35e-01 | 89.7% | 60.9% |
| 3lxzB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 32.0 | 3.23e-01 | 85.3% | 57.2% |
| 4z5qA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.53 | 41.0 | 3.04e-01 | 81.6% | 60.9% |
| 6adqG01 | 1.20.120.80 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle | 0.53 | 37.0 | 3.44e-01 | 73.5% | 87.1% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4836806 | 1063.1.1.1 ↗ | alpha complex topology › Tegument protein U14 › Tegument protein U14 › Tegument protein U14 › Herpes_pp85 | 0.82 | 78.0 | 5.39e-01 | 100.0% | 35.5% |
| 3446288 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.61 | 35.0 | 3.49e-01 | 88.2% | 53.6% |
| 3174456 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.60 | 43.0 | 3.32e-01 | 75.0% | 97.8% |
| 3723774 | 109.1.1.7 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_3 | 0.57 | 34.0 | 3.53e-01 | 86.0% | 62.3% |
| 165282 | 601.29.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › TM1646-like › TM1646-like › DUF327 | 0.57 | 32.0 | 3.45e-01 | 87.5% | 63.0% |
| 3332592 | 5069.1.1.62 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Chloroplast_duf | 0.55 | 35.0 | 3.84e-01 | 87.5% | 77.3% |
| 3707261 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 35.0 | 3.57e-01 | 100.0% | 65.4% |
| 3476230 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.54 | 43.0 | 3.30e-01 | 86.0% | 85.7% |
| 3490690 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.54 | 32.0 | 3.41e-01 | 87.5% | 64.8% |
| 3646445 | 3615.1.1.38 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › ROH1-like | 0.54 | 44.0 | 3.39e-01 | 89.7% | 56.6% |
| 3309555 | 109.4.1.603 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TAF1_subA | 0.53 | 37.0 | 2.56e-01 | 72.1% | 40.7% |
| 4984734 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.52 | 33.0 | 3.24e-01 | 84.6% | 58.6% |
| 3825417 | 192.29.1.27 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF1218 | 0.50 | 33.0 | 3.21e-01 | 89.7% | 58.1% |
| 3676620 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.50 | 46.0 | 3.26e-01 | 100.0% | 82.2% |
D2
medium
residues 159-246
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04637.17 best | Herpes_pp85 | 36.3 | 3.00e-09 | 100.0% | 16.1% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8ex5A02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.62 | 50.0 | 3.75e-01 | 88.6% | 75.7% |
| 1hciA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 42.0 | 3.76e-01 | 98.9% | 52.4% |
| 2l3lA01 | 1.20.58.1250 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain | 0.58 | 42.0 | 4.03e-01 | 77.3% | 71.7% |
| 1w23A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 35.0 | 3.30e-01 | 85.2% | 50.5% |
| 3udcA01 | 1.10.287.1260 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 39.0 | 3.59e-01 | 96.6% | 53.9% |
| 1b72A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.57 | 37.0 | 4.17e-01 | 83.0% | 86.8% |
| 2ah5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 35.0 | 3.99e-01 | 89.8% | 89.2% |
| 1ewrA02 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.52 | 36.0 | 3.34e-01 | 71.6% | 95.0% |
| 4pt1B00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.52 | 36.0 | 3.30e-01 | 75.0% | 100.0% |
| 2ar0A01 | 1.20.1260.30 | Mainly Alpha › Up-down Bundle › Ferritin › N6 adenine-specific DNA methyltransferase, N-terminal domain | 0.51 | 41.0 | 3.53e-01 | 90.9% | 78.7% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1828346 | 1063.1.1.1 ↗ | alpha complex topology › Tegument protein U14 › Tegument protein U14 › Tegument protein U14 › Herpes_pp85 | 0.95 | 91.0 | 5.55e-01 | 100.0% | 19.6% |
| 3507798 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.65 | 44.0 | 4.94e-01 | 88.6% | 96.9% |
| 3473525 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 45.0 | 5.09e-01 | 85.2% | 100.0% |
| 3245295 | 3065.1.1.1 ↗ | alpha bundles › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › ANIS5_cation-bd | 0.61 | 50.0 | 4.59e-01 | 92.0% | 67.5% |
| 3256151 | 207.1.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6 | 0.60 | 53.0 | 3.29e-01 | 97.7% | 34.6% |
| 3215990 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 42.0 | 4.58e-01 | 93.2% | 89.0% |
| 3281872 | 532.1.1.0 ↗ | alpha arrays › Type III secretion system domain-like › Antibiotic binding domain of TipA-like multidrug resistance regulators › Antibiotic binding domain of TipA-like multidrug resistance regulators | 0.59 | 44.0 | 4.01e-01 | 79.5% | 92.5% |
| 3233668 | 108.1.1.156 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › ANIS5_cation-bd | 0.58 | 36.0 | 4.14e-01 | 75.0% | 90.0% |
| 3964536 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 41.0 | 4.02e-01 | 90.9% | 68.4% |
| 3844618 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.56 | 39.0 | 4.23e-01 | 89.8% | 92.9% |
| 3290725 | 628.1.1.1 ↗ | alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › FCD | 0.53 | 41.0 | 3.51e-01 | 86.4% | 58.7% |
| 3788517 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.52 | 41.0 | 3.69e-01 | 86.4% | 66.9% |
| 3644831 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.52 | 40.0 | 4.34e-01 | 89.8% | 98.7% |
D3
medium
residues 389-454
Domain cluster:
representative
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4w8pA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.87 | 80.0 | 6.27e-01 | 100.0% | 76.2% |
| 1q0gA00 | 1.20.120.400 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nickel-containing superoxide dismutase | 0.85 | 78.0 | 6.34e-01 | 100.0% | 77.8% |
| 2etdA00 | 1.20.1440.20 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › LemA-like domain | 0.85 | 77.0 | 5.93e-01 | 100.0% | 49.6% |
| 6xz3A01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.84 | 77.0 | 6.27e-01 | 100.0% | 76.9% |
| 1st6A04 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.80 | 72.0 | 5.95e-01 | 100.0% | 77.8% |
| 2qffA00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.79 | 69.0 | 6.74e-01 | 100.0% | 95.9% |
| 2wb7A03 | 1.20.120.870 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › pT26-6p, five-helical bundle domain | 0.79 | 69.0 | 5.48e-01 | 100.0% | 62.5% |
| 4im0A04 | 1.20.1270.420 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.78 | 68.0 | 4.67e-01 | 100.0% | 76.1% |
| 1m5iA00 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.78 | 53.0 | 4.52e-01 | 71.2% | 82.9% |
| 1i4dA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.78 | 68.0 | 4.92e-01 | 100.0% | 86.7% |
| 4i1mB01 | 1.20.120.1700 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.77 | 67.0 | 5.39e-01 | 97.0% | 97.7% |
| 8cdaB03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.77 | 67.0 | 5.10e-01 | 100.0% | 70.4% |
| 3t46A00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.77 | 67.0 | 6.50e-01 | 98.5% | 93.3% |
| 2lmgA00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.76 | 67.0 | 6.51e-01 | 98.5% | 100.0% |
| 2rd0B00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.76 | 52.0 | 4.03e-01 | 71.2% | 42.4% |
| 3rf7A02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.75 | 65.0 | 4.87e-01 | 98.5% | 39.0% |
| 7e4gA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.75 | 66.0 | 4.73e-01 | 100.0% | 99.0% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.74 | 52.0 | 4.10e-01 | 74.2% | 59.4% |
| 1cpqA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.73 | 64.0 | 5.18e-01 | 100.0% | 76.7% |
| 3uo2B02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.73 | 49.0 | 4.59e-01 | 71.2% | 70.2% |
| 3tulB00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.72 | 60.0 | 4.83e-01 | 93.9% | 90.2% |
| 1aueB00 | 1.20.120.150 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › FKBP12-rapamycin binding domain | 0.72 | 62.0 | 5.57e-01 | 100.0% | 78.7% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.71 | 48.0 | 4.67e-01 | 71.2% | 74.3% |
| 2cdqA02 | 1.20.120.1320 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartokinase, catalytic domain | 0.69 | 60.0 | 5.36e-01 | 100.0% | 84.5% |
| 3i2wA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.69 | 59.0 | 4.02e-01 | 100.0% | 81.8% |
| 8e9gJ01 | 1.20.120.1200 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ | 0.68 | 50.0 | 3.72e-01 | 78.8% | 34.7% |
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.68 | 54.0 | 4.41e-01 | 89.4% | 78.5% |
| 4fjvA02 | 1.20.1300.20 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Peptidase C65 Otubain, subdomain 2 | 0.68 | 58.0 | 4.61e-01 | 100.0% | 54.2% |
| 3k17A02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.67 | 49.0 | 3.92e-01 | 92.4% | 37.9% |
| 3d1uA03 | 1.20.1270.240 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.67 | 54.0 | 4.80e-01 | 93.9% | 63.4% |
| 1jalA03 | 1.10.150.300 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Obg-related GTPase Ych/YyaF, coiled-coil domain | 0.67 | 55.0 | 5.21e-01 | 93.9% | 81.5% |
| 3nymA00 | 6.10.290.10 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.67 | 54.0 | 4.43e-01 | 90.9% | 87.9% |
| 2bl2A00 | 1.20.120.610 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase | 0.66 | 57.0 | 4.42e-01 | 100.0% | 64.1% |
| 2d1lA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.66 | 55.0 | 3.83e-01 | 100.0% | 79.1% |
| 6qumQ00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.65 | 46.0 | 4.50e-01 | 75.8% | 100.0% |
| 3vr4B04 | 1.10.1140.10 | Mainly Alpha › Orthogonal Bundle › Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 › Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 | 0.64 | 54.0 | 4.26e-01 | 100.0% | 47.0% |
| 3zciA00 | 1.20.58.1660 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 58.0 | 4.07e-01 | 100.0% | 62.3% |
| 3c7jA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.63 | 55.0 | 4.29e-01 | 100.0% | 80.8% |
| 6qumA04 | 1.10.1140.10 | Mainly Alpha › Orthogonal Bundle › Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 › Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 | 0.61 | 52.0 | 4.12e-01 | 100.0% | 46.3% |
| 1s3qG00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.61 | 51.0 | 3.98e-01 | 100.0% | 82.8% |
| 4m70I00 | 1.20.5.4130 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.61 | 49.0 | 4.27e-01 | 92.4% | 69.4% |
| 1k32A03 | 3.30.750.44 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.56 | 46.0 | 4.55e-01 | 100.0% | 91.7% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3581944 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.88 | 80.0 | 6.60e-01 | 100.0% | 57.4% |
| 4129856 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.85 | 76.0 | 6.99e-01 | 100.0% | 82.4% |
| 3903422 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.83 | 57.0 | 4.59e-01 | 71.2% | 43.3% |
| 4426305 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.83 | 74.0 | 6.98e-01 | 100.0% | 87.5% |
| 4037262 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.83 | 74.0 | 6.54e-01 | 100.0% | 73.7% |
| 4209005 | 632.15.1.4 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) › HSP70 | 0.82 | 74.0 | 6.93e-01 | 100.0% | 87.5% |
| 4477580 | 5086.1.1.118 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › BBS2_hp | 0.81 | 56.0 | 5.12e-01 | 71.2% | 61.2% |
| 4999359 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.81 | 71.0 | 6.47e-01 | 100.0% | 85.6% |
| 3626769 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.80 | 55.0 | 4.92e-01 | 71.2% | 73.3% |
| 3567670 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.78 | 54.0 | 4.82e-01 | 71.2% | 73.3% |
| 3272619 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.77 | 69.0 | 5.64e-01 | 100.0% | 77.5% |
| 3356479 | 192.29.1.48 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Chloroplast_duf | 0.76 | 67.0 | 4.31e-01 | 100.0% | 43.9% |
| 5016657 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.75 | 65.0 | 6.48e-01 | 100.0% | 94.3% |
| 3744077 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.75 | 67.0 | 4.48e-01 | 100.0% | 82.0% |
| 4981750 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.75 | 65.0 | 6.16e-01 | 100.0% | 82.5% |
| 5061756 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.75 | 66.0 | 6.08e-01 | 100.0% | 77.6% |
| 5061320 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.75 | 63.0 | 6.02e-01 | 98.5% | 80.0% |
| 3603627 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.74 | 64.0 | 6.21e-01 | 100.0% | 88.0% |
| 5058632 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.74 | 65.0 | 6.39e-01 | 100.0% | 94.3% |
| 5060144 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.74 | 64.0 | 6.34e-01 | 100.0% | 94.3% |
| 5061321 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.74 | 65.0 | 6.03e-01 | 100.0% | 77.6% |
| 5060141 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.74 | 64.0 | 6.33e-01 | 100.0% | 95.7% |
| 5061332 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.74 | 64.0 | 6.04e-01 | 100.0% | 82.5% |
| 5060143 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.73 | 63.0 | 6.00e-01 | 100.0% | 82.5% |
| 4982050 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.73 | 63.0 | 6.26e-01 | 100.0% | 94.3% |
| 5070001 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.73 | 63.0 | 6.20e-01 | 100.0% | 94.3% |
| 4983596 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.73 | 63.0 | 6.33e-01 | 98.5% | 100.0% |
| 5070668 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.73 | 61.0 | 5.91e-01 | 97.0% | 85.3% |
| 3883526 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.71 | 62.0 | 4.04e-01 | 100.0% | 68.1% |
| 3503444 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.70 | 59.0 | 5.24e-01 | 89.4% | 90.0% |
| 5024791 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.69 | 61.0 | 4.64e-01 | 100.0% | 90.6% |
| 4295410 | 633.13.1.1 ↗ | alpha bundles › Bromodomain-like › DsbB-like › DsbB-like › DsbB | 0.68 | 58.0 | 4.45e-01 | 100.0% | 50.3% |
| 3232875 | 11.2.1.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › Anillin | 0.66 | 50.0 | 3.53e-01 | 84.8% | 49.5% |
| 2323907 | 212.1.1.24 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Morc6_S5 | 0.65 | 49.0 | 3.35e-01 | 80.3% | 61.2% |
| 4386662 | 3291.1.1.158 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Seryl_tRNA_N | 0.64 | 50.0 | 4.26e-01 | 87.9% | 93.0% |
| 4162727 | 5086.1.1.12 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › Uds1 | 0.62 | 54.0 | 4.22e-01 | 100.0% | 94.5% |
| 5036205 | 2004.1.1.348 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SbcC_Walker_B | 0.52 | 45.0 | 2.57e-01 | 98.5% | 86.3% |