tegument_protein_UL88

Euk-Vir

Elephantid_betaherpesvirus_1

tegument_protein_UL88__YP_007969786__Elephantid_betaherpesvirus_1__146015

Identity

86.4 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Proboscivirus› Elephantid_betaherpesvirus_1

TaxID: 146015

View cluster (21 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-132

PDB

Domain cluster: rep: tegument_protein_UL88__YP_002608280__Human_herpesvirus_5__10359__D21-114_139-191

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04529.18 best	Herpes_U59	38.3	1.20e-09	99.2%	28.8%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2lezA00	3.30.2450.10	Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2	0.52	36.0	3.68e-01	85.0%	72.5%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3924975	4.1.1.377 ↗	beta barrels › SH3 › SH3 › SH3 › MSL3_chromo-like	0.56	30.0	3.53e-01	72.5%	75.0%
3262289	210.1.2.4 ↗	a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › AAT	0.55	48.0	3.24e-01	97.5%	55.3%
3487323	214.1.1.1 ↗	a+b two layers › SH2 › SH2 › SH2 › SH2	0.53	29.0	3.32e-01	70.8%	71.8%
4538466	3197.1.1.1 ↗	a+b two layers › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › PipB2_N	0.51	36.0	3.55e-01	85.0%	66.9%
3770801	4.1.1.248 ↗	beta barrels › SH3 › SH3 › SH3 › CABIT	0.50	33.0	3.65e-01	75.0%	84.2%

D2 medium residues 138-346

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04529.18 best	Herpes_U59	41.8	1.10e-10	75.6%	39.7%