tegument_protein_UL88

Euk-Vir

Human_betaherpesvirus_5

tegument_protein_UL88__YP_081536__Human_betaherpesvirus_5__10359

Identity

79.1 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Cytomegalovirus› Human_betaherpesvirus_5

TaxID: 10359

View cluster (21 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-116_135-186

PDB

Domain cluster: rep: tegument_protein_UL88__YP_002608280__Human_herpesvirus_5__10359__D21-114_139-191

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04529.18 best	Herpes_U59	240.6	3.90e-71	100.0%	39.7%

D2 high residues 210-327

PDB

Domain cluster: rep: hypothetical_protein_MRV_0079__YP_009344906__Murine_roseolovirus__1940555__D154-242

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04529.18 best	Herpes_U59	137.5	8.90e-40	100.0%	30.4%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1u61A00	1.10.1520.10	Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain	0.51	37.0	3.65e-01	74.6%	89.8%
1wbeA01	1.10.3520.10	Mainly Alpha › Orthogonal Bundle › Glycolipid transfer protein, GLTP › Glycolipid transfer protein	0.51	36.0	3.19e-01	73.7%	97.8%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3184107	4156.1.1.1 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63	0.57	41.0	4.08e-01	74.6%	95.2%
3281177	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.56	44.0	3.91e-01	88.1%	85.4%
3355307	2004.1.1.0 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases	0.54	39.0	2.81e-01	76.3%	27.0%
3871115	4156.1.1.2 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_N,HA2_C	0.52	37.0	3.04e-01	75.4%	55.2%
4001716	4156.1.1.4 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C	0.52	38.0	3.01e-01	77.1%	47.7%

D3 high residues 329-428

PDB

Domain cluster: rep: E88__YP_007016485__Murid_betaherpesvirus_8__1261657__D330-411

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04529.18 best	Herpes_U59	94.5	9.90e-27	100.0%	25.8%