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tegument_protein_VP11_12
Euk-VirHuman_alphaherpesvirus_3
tegument_protein_VP11_12__NP_040135__Human_alphaherpesvirus_3__10335
Identity
- Accession:
- NP_040135 ↗
- Protein ID:
- tegument_protein_VP11_12
- Kingdom:
- euk
Quality
65.7
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Varicellovirus›
Human_alphaherpesvirus_3
TaxID: 10335
Cluster
View cluster (32 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 59-114_188-448
Domain cluster:
rep: tegument_protein_VP13_14__YP_068328__Suid_alphaherpesvirus_1__10345__D439-734
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03387.19 best | Herpes_UL46 | 480.1 | 8.60e-144 | 82.7% | 60.2% |
| PF03387.19 | Herpes_UL46 | 77.8 | 1.10e-21 | 18.3% | 13.1% |
D2
medium
residues 115-187
Domain cluster:
rep: ORF14_gene_product__YP_006272993__Equid_alphaherpesvirus_8__39637__D93-159
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03387.19 best | Herpes_UL46 | 105.1 | 5.40e-30 | 100.0% | 16.8% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ay5A01 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.57 | 42.0 | 3.46e-01 | 78.1% | 84.2% |
| 4d8mA01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.56 | 40.0 | 2.86e-01 | 76.7% | 51.9% |
| 3gwbA01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.54 | 39.0 | 2.88e-01 | 79.5% | 71.4% |
| 4dq5B00 | 1.10.530.50 | Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40 | 0.51 | 36.0 | 2.82e-01 | 95.9% | 33.1% |
| 3tl4X01 | 1.10.8.1290 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1, domain 1 | 0.51 | 35.0 | 3.01e-01 | 71.2% | 92.1% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2526355 | 7094.1.1.2 ↗ | alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › LIS_MGM1 | 0.63 | 53.0 | 4.72e-01 | 94.5% | 74.3% |
| 4014996 | 7094.1.1.0 ↗ | alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin | 0.63 | 52.0 | 4.73e-01 | 93.2% | 78.0% |
| 3837680 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 42.0 | 3.38e-01 | 83.6% | 38.8% |
| 3441125 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 39.0 | 3.73e-01 | 72.6% | 100.0% |
| 5047538 | 159.1.1.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 | 0.54 | 43.0 | 3.89e-01 | 91.8% | 70.9% |
| 3812592 | 109.4.1.1948 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Zw10_middle | 0.54 | 41.0 | 3.22e-01 | 82.2% | 59.4% |
| 3701212 | 630.1.1.1 ↗ | a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › Rubis-subs-bind | 0.54 | 45.0 | 3.46e-01 | 94.5% | 42.9% |
| 3609215 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.53 | 37.0 | 3.59e-01 | 72.6% | 73.8% |
| 4027226 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.52 | 39.0 | 3.04e-01 | 82.2% | 38.2% |
| 5078729 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.51 | 41.0 | 2.64e-01 | 87.7% | 27.4% |
| 4020112 | 4030.1.1.0 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz | 0.51 | 37.0 | 3.75e-01 | 79.5% | 80.0% |
| 4025618 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 37.0 | 2.53e-01 | 79.5% | 25.1% |
| 3717093 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.50 | 37.0 | 3.82e-01 | 78.1% | 81.4% |
| 5067143 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.50 | 35.0 | 2.98e-01 | 72.6% | 64.3% |