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tegument_protein_VP11_12

Euk-Vir

Macacine_alphaherpesvirus_1

tegument_protein_VP11_12__NP_851906__Macacine_alphaherpesvirus_1__10325

Identity

Accession:: NP_851906 ↗
Protein ID:: tegument_protein_VP11_12
Kingdom:: euk

Quality

66.2 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Simplexvirus› Macacine_alphaherpesvirus_1

TaxID: 10325

Cluster

View cluster (32 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 38-118_153-165_382-426

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03387.19 best	Herpes_UL46	92.1	4.60e-26	64.8%	18.2%
PF03387.19	Herpes_UL46	45.2	8.10e-12	40.3%	10.8%

CATH (19)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3icxA01	1.10.287.660	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.62	31.0	4.07e-01	87.1%	86.7%
3k29A00	1.10.287.1700	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.61	30.0	2.91e-01	88.5%	40.4%
1qsdA00	1.20.58.90	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.61	30.0	3.52e-01	88.5%	63.7%
1s35A02	1.20.58.60	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.60	33.0	3.71e-01	87.1%	68.2%
3nvoB02	1.20.58.340	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region	0.60	32.0	3.45e-01	85.6%	59.5%
2ic6A00	1.20.58.90	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.60	30.0	4.07e-01	86.3%	94.4%
3favD00	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.59	34.0	4.26e-01	85.6%	98.7%
4egwA02	1.20.58.340	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region	0.58	32.0	3.43e-01	87.8%	60.5%
1ydxA02	1.10.287.1120	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein	0.57	34.0	4.04e-01	89.9%	90.0%
4w4kA00	1.10.287.850	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain	0.55	30.0	3.71e-01	87.1%	87.8%
3fppA03	6.10.140.1990	Special › Helix non-globular › Helix Hairpins ›	0.54	30.0	3.70e-01	87.8%	85.2%
4z5qA00	1.10.630.10	Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450	0.53	45.0	3.39e-01	93.5%	60.6%
1i6zA00	1.20.58.120	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain	0.53	30.0	3.09e-01	87.8%	56.3%
4mh6A00	1.10.287.1700	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.53	33.0	3.23e-01	87.8%	54.1%
4ioeA00	1.10.287.850	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain	0.52	30.0	3.59e-01	87.1%	88.5%
1wa8A00	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.52	31.0	3.54e-01	87.1%	80.8%
2dw4A03	1.10.287.80	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain	0.51	30.0	3.42e-01	89.2%	78.2%
6r1nA01	1.10.287.40	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain	0.51	31.0	3.54e-01	89.9%	81.6%
6ygiB01	1.10.4090.10	Mainly Alpha › Orthogonal Bundle › Hepatitis B viral capsid (hbcag) fold › Viral capsid, core domain supefamily, Hepatitis B virus	0.50	33.0	3.33e-01	94.2%	63.0%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3909017	192.5.1.1 ↗	alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1	0.55	30.0	3.65e-01	87.1%	81.1%
3999274	5086.1.1.102 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PTHB1_hp	0.55	30.0	3.48e-01	87.1%	71.4%
3171689	603.1.1.105 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF31021	0.54	32.0	3.40e-01	89.2%	66.7%
3583440	604.1.1.1 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin	0.53	32.0	3.39e-01	86.3%	65.8%
1171038	3755.3.1.148 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › CT398_CC	0.53	29.0	2.63e-01	87.1%	37.7%
3917090	604.1.1.1 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin	0.53	32.0	3.29e-01	87.1%	60.0%
3612519	5086.1.1.0 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins	0.52	30.0	3.01e-01	87.8%	54.3%
3883670	604.1.1.7 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SR_plectin_7	0.52	31.0	3.35e-01	85.6%	67.5%
3215342	3291.1.1.0 ↗	alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related	0.51	30.0	3.56e-01	86.3%	85.3%
3485540	603.1.1.1 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin	0.51	30.0	2.80e-01	89.9%	44.6%
3915380	192.5.1.25 ↗	alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › PTHB1_hp	0.51	30.0	3.60e-01	85.6%	88.9%
5046162	1075.1.2.0 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain	0.50	39.0	3.64e-01	82.7%	70.6%
3275446	3922.1.1.0 ↗	alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3	0.50	31.0	3.27e-01	87.1%	66.2%

D2 medium residues 222-381

PDB

Domain cluster: rep: tegument_protein_VP11_12__YP_009011033__Chimpanzee_herpesvirus_strain_105640__332937__D222-382

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03387.19 best	Herpes_UL46	207.0	6.30e-61	100.0%	36.5%